RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 NACAP1Q9BZK3 213 aa20.98■□□□□ 0.95
NR1H3-228ENST00000525441 KIAA1683Q9H0B3 1180 aa20.98■□□□□ 0.95
NR1H3-228ENST00000525441 EMILIN3Q9NT22 766 aa20.98■□□□□ 0.95
NR1H3-228ENST00000525441 ECM2O94769 699 aaPredicted RBP20.97■□□□□ 0.95
NR1H3-228ENST00000525441 GUCY1A2P33402 732 aa20.97■□□□□ 0.95
NR1H3-228ENST00000525441 TDO2P48775 406 aa20.97■□□□□ 0.95
NR1H3-228ENST00000525441 RGS19P49795 217 aa20.97■□□□□ 0.95
NR1H3-228ENST00000525441 SOX10P56693 466 aa20.97■□□□□ 0.95
NR1H3-228ENST00000525441 NBPF11Q86T75 865 aa20.97■□□□□ 0.95
NR1H3-228ENST00000525441 TICAM2Q86XR7 235 aa20.97■□□□□ 0.95
NR1H3-228ENST00000525441 ANKRD13CQ8N6S4 541 aa20.97■□□□□ 0.95
NR1H3-228ENST00000525441 C12orf42Q96LP6 360 aa20.97■□□□□ 0.95
NR1H3-228ENST00000525441 SRRDQ9UH36 339 aa20.97■□□□□ 0.95
NR1H3-228ENST00000525441 PTCH2Q9Y6C5 1203 aa20.97■□□□□ 0.95
NR1H3-228ENST00000525441 PATL2C9JE40 543 aaKnown RBP20.96■□□□□ 0.95
NR1H3-228ENST00000525441 ZYXQ15942 572 aaKnown RBP20.96■□□□□ 0.95
NR1H3-228ENST00000525441 SLC9C1Q4G0N8 1177 aa20.96■□□□□ 0.95
NR1H3-228ENST00000525441 ACER1Q8TDN7 264 aa20.96■□□□□ 0.95
NR1H3-228ENST00000525441 GTF3C2Q8WUA4 911 aaPredicted RBP20.96■□□□□ 0.95
NR1H3-228ENST00000525441 ARMC5Q96C12 935 aa20.96■□□□□ 0.95
NR1H3-228ENST00000525441 CTGFP29279 349 aa20.95■□□□□ 0.94
NR1H3-228ENST00000525441 IRX6P78412 446 aaPredicted RBP20.95■□□□□ 0.94
NR1H3-228ENST00000525441 SEC62Q99442 399 aaKnown RBP20.95■□□□□ 0.94
NR1H3-228ENST00000525441 MYPNQ86TC9 1320 aa20.95■□□□□ 0.94
NR1H3-228ENST00000525441 MINDY4BA8MYZ0 360 aa20.94■□□□□ 0.94
NR1H3-228ENST00000525441 USP17L15C9J2P7 530 aa20.94■□□□□ 0.94
NR1H3-228ENST00000525441 USP17L13C9JLJ4 530 aa20.94■□□□□ 0.94
NR1H3-228ENST00000525441 USP17L11C9JVI0 530 aa20.94■□□□□ 0.94
NR1H3-228ENST00000525441 USP17L18D6R9N7 530 aa20.94■□□□□ 0.94
NR1H3-228ENST00000525441 USP17L22D6RA61 530 aa20.94■□□□□ 0.94
NR1H3-228ENST00000525441 USP17L17D6RBQ6 530 aa20.94■□□□□ 0.94
NR1H3-228ENST00000525441 USP17L19D6RCP7 530 aa20.94■□□□□ 0.94
NR1H3-228ENST00000525441 USP17L20D6RJB6 530 aa20.94■□□□□ 0.94
NR1H3-228ENST00000525441 TNPO2O14787 897 aaKnown RBP20.94■□□□□ 0.94
NR1H3-228ENST00000525441 AKR1B1P15121 316 aa20.94■□□□□ 0.94
NR1H3-228ENST00000525441 USP17L24Q0WX57 530 aa20.94■□□□□ 0.94
NR1H3-228ENST00000525441 RAET1EQ8TD07 263 aa20.94■□□□□ 0.94
NR1H3-228ENST00000525441 P2RX7Q99572 595 aaKnown RBP20.94■□□□□ 0.94
NR1H3-228ENST00000525441 SH2D4AQ9H788 454 aa20.94■□□□□ 0.94
NR1H3-228ENST00000525441 ZNF287Q9HBT7 754 aa20.94■□□□□ 0.94
NR1H3-228ENST00000525441 ARHGEF10LQ9HCE6 1279 aa20.94■□□□□ 0.94
NR1H3-228ENST00000525441 TRIM6-TRIM34B2RNG4 842 aa20.93■□□□□ 0.94
NR1H3-228ENST00000525441 HERVK_113P62684 666 aa20.93■□□□□ 0.94
NR1H3-228ENST00000525441 ICA1Q05084 483 aa20.93■□□□□ 0.94
NR1H3-228ENST00000525441 PLEKHM2Q8IWE5 1019 aa20.93■□□□□ 0.94
NR1H3-228ENST00000525441 IFNL3Q8IZI9 196 aa20.93■□□□□ 0.94
NR1H3-228ENST00000525441 OSBPL3Q9H4L5 887 aa20.93■□□□□ 0.94
NR1H3-228ENST00000525441 MKNK2Q9HBH9 465 aa20.93■□□□□ 0.94
NR1H3-228ENST00000525441 EPB41L4AQ9HCS5 686 aaPredicted RBP20.93■□□□□ 0.94
NR1H3-228ENST00000525441 ZSWIM8A7E2V4 1837 aa20.92■□□□□ 0.94
NR1H3-228ENST00000525441 MYH8P13535 1937 aa20.92■□□□□ 0.94
NR1H3-228ENST00000525441 SMIM22K7EJ46 135 aa20.92■□□□□ 0.94
NR1H3-228ENST00000525441 VCAM1P19320 739 aa20.92■□□□□ 0.94
NR1H3-228ENST00000525441 MLLT1Q03111 559 aaPredicted RBP20.92■□□□□ 0.94
NR1H3-228ENST00000525441 COA7Q96BR5 231 aa20.92■□□□□ 0.94
NR1H3-228ENST00000525441 NAPBQ9H115 298 aa20.92■□□□□ 0.94
NR1H3-228ENST00000525441 HELLSQ9NRZ9 838 aa20.92■□□□□ 0.94
NR1H3-228ENST00000525441 MORF4L1Q9UBU8 362 aa20.92■□□□□ 0.94
NR1H3-228ENST00000525441 ROBO3Q96MS0 1386 aa20.92■□□□□ 0.94
NR1H3-228ENST00000525441 SLC3A2P08195 630 aaKnown RBP20.91■□□□□ 0.94
NR1H3-228ENST00000525441 PRKCZQ05513 592 aa20.91■□□□□ 0.94
NR1H3-228ENST00000525441 GPRC5AQ8NFJ5 357 aa20.91■□□□□ 0.94
NR1H3-228ENST00000525441 RILPL2Q969X0 211 aa20.91■□□□□ 0.94
NR1H3-228ENST00000525441 ZNF333Q96JL9 665 aa20.91■□□□□ 0.94
NR1H3-228ENST00000525441 KANSL2Q9H9L4 492 aa20.91■□□□□ 0.94
NR1H3-228ENST00000525441 A0A1W2PRG0 241 aa20.9■□□□□ 0.94
NR1H3-228ENST00000525441 CATSPERGQ6ZRH7 1159 aa20.9■□□□□ 0.94
NR1H3-228ENST00000525441 LPAR1Q92633 364 aa20.9■□□□□ 0.94
NR1H3-228ENST00000525441 TMEM106CQ9BVX2 250 aa20.9■□□□□ 0.94
NR1H3-228ENST00000525441 GRK4P32298 578 aa20.89■□□□□ 0.93
NR1H3-228ENST00000525441 STK11IPQ8N1F8 1099 aa20.89■□□□□ 0.93
NR1H3-228ENST00000525441 RPAP3Q9H6T3 665 aaPredicted RBP20.89■□□□□ 0.93
NR1H3-228ENST00000525441 TMX2Q9Y320 296 aa20.89■□□□□ 0.93
NR1H3-228ENST00000525441 MGAMO43451 1857 aa20.88■□□□□ 0.93
NR1H3-228ENST00000525441 RASA1P20936 1047 aa20.88■□□□□ 0.93
NR1H3-228ENST00000525441 ATP2B2Q01814 1243 aa20.88■□□□□ 0.93
NR1H3-228ENST00000525441 PDE4BQ07343 736 aa20.88■□□□□ 0.93
NR1H3-228ENST00000525441 MCMDC2Q4G0Z9 681 aa20.88■□□□□ 0.93
NR1H3-228ENST00000525441 CCDC129Q6ZRS4 1044 aa20.88■□□□□ 0.93
NR1H3-228ENST00000525441 CCAR1Q8IX12 1150 aaKnown RBP20.88■□□□□ 0.93
NR1H3-228ENST00000525441 ZNF444Q8N0Y2 327 aaPredicted RBP20.88■□□□□ 0.93
NR1H3-228ENST00000525441 SLAIN1Q8ND83 568 aa20.88■□□□□ 0.93
NR1H3-228ENST00000525441 SH3TC2Q8TF17 1288 aa20.88■□□□□ 0.93
NR1H3-228ENST00000525441 PAGR1Q9BTK6 254 aa20.88■□□□□ 0.93
NR1H3-228ENST00000525441 RABGAP1Q9Y3P9 1069 aa20.88■□□□□ 0.93
NR1H3-228ENST00000525441 EEF2P13639 858 aaKnown RBP20.87■□□□□ 0.93
NR1H3-228ENST00000525441 FLT3LGP49771 235 aa20.87■□□□□ 0.93
NR1H3-228ENST00000525441 ERVK-9P63128 1117 aa20.87■□□□□ 0.93
NR1H3-228ENST00000525441 ERVK-24P63145 666 aa20.87■□□□□ 0.93
NR1H3-228ENST00000525441 PPARAQ07869 468 aa20.87■□□□□ 0.93
NR1H3-228ENST00000525441 CLEC10AQ8IUN9 316 aa20.87■□□□□ 0.93
NR1H3-228ENST00000525441 SIAH1Q8IUQ4 282 aa20.87■□□□□ 0.93
NR1H3-228ENST00000525441 VCPKMTQ9H867 229 aa20.87■□□□□ 0.93
NR1H3-228ENST00000525441 TXNRD2Q9NNW7 524 aa20.87■□□□□ 0.93
NR1H3-228ENST00000525441 RBPJLQ9UBG7 517 aa20.87■□□□□ 0.93
NR1H3-228ENST00000525441 GABRQQ9UN88 632 aa20.87■□□□□ 0.93
NR1H3-228ENST00000525441 HTTP42858 3142 aa20.86■□□□□ 0.93
NR1H3-228ENST00000525441 MAPK4P31152 587 aa20.86■□□□□ 0.93
NR1H3-228ENST00000525441 CCNA1P78396 465 aa20.86■□□□□ 0.93
NR1H3-228ENST00000525441 IRF5Q13568 498 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms