RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 SSH3Q8TE77 659 aa11.69□□□□□ -0.54
TRAPPC4-206ENST00000525303 GTF3C2Q8WUA4 911 aaPredicted RBP11.69□□□□□ -0.54
TRAPPC4-206ENST00000525303 USP6NLQ92738 828 aa11.69□□□□□ -0.54
TRAPPC4-206ENST00000525303 ZNF512BQ96KM6 892 aaPredicted RBP11.69□□□□□ -0.54
TRAPPC4-206ENST00000525303 C1orf115Q9H7X2 142 aa11.69□□□□□ -0.54
TRAPPC4-206ENST00000525303 DBNLQ9UJU6 430 aaKnown RBP11.69□□□□□ -0.54
TRAPPC4-206ENST00000525303 DLL1O00548 723 aa11.68□□□□□ -0.54
TRAPPC4-206ENST00000525303 MS4A1P11836 297 aa11.68□□□□□ -0.54
TRAPPC4-206ENST00000525303 CYP7A1P22680 504 aa11.68□□□□□ -0.54
TRAPPC4-206ENST00000525303 ATP8B2P98198 1209 aa11.68□□□□□ -0.54
TRAPPC4-206ENST00000525303 ZYXQ15942 572 aaKnown RBP11.68□□□□□ -0.54
TRAPPC4-206ENST00000525303 MORN1Q5T089 497 aa11.68□□□□□ -0.54
TRAPPC4-206ENST00000525303 ZKSCAN2Q63HK3 967 aa11.68□□□□□ -0.54
TRAPPC4-206ENST00000525303 USP17L2Q6R6M4 530 aa11.68□□□□□ -0.54
TRAPPC4-206ENST00000525303 PLEKHH3Q7Z736 793 aa11.68□□□□□ -0.54
TRAPPC4-206ENST00000525303 MIGA1Q8NAN2 632 aa11.68□□□□□ -0.54
TRAPPC4-206ENST00000525303 FEZ1Q99689 392 aa11.68□□□□□ -0.54
TRAPPC4-206ENST00000525303 CCDC8Q9H0W5 538 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC4-206ENST00000525303 CWC22Q9HCG8 908 aaKnown RBP11.68□□□□□ -0.54
TRAPPC4-206ENST00000525303 TLR7Q9NYK1 1049 aaKnown RBP11.68□□□□□ -0.54
TRAPPC4-206ENST00000525303 A0A0G2JMZ2 1700 aa11.68□□□□□ -0.54
TRAPPC4-206ENST00000525303 ZNF236Q9UL36 1845 aa11.67□□□□□ -0.54
TRAPPC4-206ENST00000525303 IGSF3O75054 1194 aa11.67□□□□□ -0.54
TRAPPC4-206ENST00000525303 IDH1O75874 414 aaKnown RBP11.67□□□□□ -0.54
TRAPPC4-206ENST00000525303 COL6A1P12109 1028 aa11.67□□□□□ -0.54
TRAPPC4-206ENST00000525303 LRIT3Q3SXY7 679 aa11.67□□□□□ -0.54
TRAPPC4-206ENST00000525303 LHX8Q68G74 356 aa11.67□□□□□ -0.54
TRAPPC4-206ENST00000525303 GPR153Q6NV75 609 aa11.67□□□□□ -0.54
TRAPPC4-206ENST00000525303 TATDN1Q6P1N9 297 aa11.67□□□□□ -0.54
TRAPPC4-206ENST00000525303 Q7L0L9 218 aa11.67□□□□□ -0.54
TRAPPC4-206ENST00000525303 TDHQ8IZJ6 230 aa11.67□□□□□ -0.54
TRAPPC4-206ENST00000525303 APBA2Q99767 749 aa11.67□□□□□ -0.54
TRAPPC4-206ENST00000525303 UBE2OQ9C0C9 1292 aaKnown RBP11.67□□□□□ -0.54
TRAPPC4-206ENST00000525303 NDUFB9Q9Y6M9 179 aa11.67□□□□□ -0.54
TRAPPC4-206ENST00000525303 USP17L15C9J2P7 530 aa11.66□□□□□ -0.54
TRAPPC4-206ENST00000525303 USP17L13C9JLJ4 530 aa11.66□□□□□ -0.54
TRAPPC4-206ENST00000525303 USP17L11C9JVI0 530 aa11.66□□□□□ -0.54
TRAPPC4-206ENST00000525303 USP17L18D6R9N7 530 aa11.66□□□□□ -0.54
TRAPPC4-206ENST00000525303 USP17L22D6RA61 530 aa11.66□□□□□ -0.54
TRAPPC4-206ENST00000525303 USP17L17D6RBQ6 530 aa11.66□□□□□ -0.54
TRAPPC4-206ENST00000525303 USP17L19D6RCP7 530 aa11.66□□□□□ -0.54
TRAPPC4-206ENST00000525303 USP17L20D6RJB6 530 aa11.66□□□□□ -0.54
TRAPPC4-206ENST00000525303 CNMDO75829 334 aa11.66□□□□□ -0.54
TRAPPC4-206ENST00000525303 USP5P45974 858 aa11.66□□□□□ -0.54
TRAPPC4-206ENST00000525303 USP17L24Q0WX57 530 aa11.66□□□□□ -0.54
TRAPPC4-206ENST00000525303 MAP2K5Q13163 448 aa11.66□□□□□ -0.54
TRAPPC4-206ENST00000525303 RAB3GAP1Q15042 981 aa11.66□□□□□ -0.54
TRAPPC4-206ENST00000525303 LRRC26Q2I0M4 334 aa11.66□□□□□ -0.54
TRAPPC4-206ENST00000525303 WDR78Q5VTH9 848 aa11.66□□□□□ -0.54
TRAPPC4-206ENST00000525303 DEFB123Q8N688 67 aa11.66□□□□□ -0.54
TRAPPC4-206ENST00000525303 MAGEB6Q8N7X4 407 aa11.66□□□□□ -0.54
TRAPPC4-206ENST00000525303 EAF2Q96CJ1 260 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC4-206ENST00000525303 C12orf42Q96LP6 360 aa11.66□□□□□ -0.54
TRAPPC4-206ENST00000525303 SERPINB13Q9UIV8 391 aa11.66□□□□□ -0.54
TRAPPC4-206ENST00000525303 VCAM1P19320 739 aa11.65□□□□□ -0.54
TRAPPC4-206ENST00000525303 CCNA1P78396 465 aa11.65□□□□□ -0.54
TRAPPC4-206ENST00000525303 CERKLQ49MI3 558 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC4-206ENST00000525303 CATSPERGQ6ZRH7 1159 aa11.65□□□□□ -0.54
TRAPPC4-206ENST00000525303 CERS3Q8IU89 383 aa11.65□□□□□ -0.54
TRAPPC4-206ENST00000525303 ACER1Q8TDN7 264 aa11.65□□□□□ -0.54
TRAPPC4-206ENST00000525303 EDC3Q96F86 508 aaKnown RBP11.65□□□□□ -0.54
TRAPPC4-206ENST00000525303 EHD4Q9H223 541 aa11.65□□□□□ -0.54
TRAPPC4-206ENST00000525303 ANTXR1Q9H6X2 564 aa11.65□□□□□ -0.54
TRAPPC4-206ENST00000525303 FLRT1Q9NZU1 646 aa11.65□□□□□ -0.54
TRAPPC4-206ENST00000525303 NOP58Q9Y2X3 529 aaKnown RBP11.65□□□□□ -0.54
TRAPPC4-206ENST00000525303 RABGAP1Q9Y3P9 1069 aa11.65□□□□□ -0.54
TRAPPC4-206ENST00000525303 EYSQ5T1H1 3165 aa11.65□□□□□ -0.54
TRAPPC4-206ENST00000525303 GLRX3O76003 335 aaKnown RBP11.64□□□□□ -0.55
TRAPPC4-206ENST00000525303 USP14P54578 494 aa11.64□□□□□ -0.55
TRAPPC4-206ENST00000525303 MDM2Q00987 491 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC4-206ENST00000525303 ABCB5Q2M3G0 1257 aa11.64□□□□□ -0.55
TRAPPC4-206ENST00000525303 MFSD14CQ5VZR4 134 aa11.64□□□□□ -0.55
TRAPPC4-206ENST00000525303 TTC6Q86TZ1 520 aa11.64□□□□□ -0.55
TRAPPC4-206ENST00000525303 ITPRIPQ8IWB1 547 aa11.64□□□□□ -0.55
TRAPPC4-206ENST00000525303 FTSJ3Q8IY81 847 aaKnown RBP11.64□□□□□ -0.55
TRAPPC4-206ENST00000525303 KIAA1683Q9H0B3 1180 aa11.64□□□□□ -0.55
TRAPPC4-206ENST00000525303 CDH23Q9H251 3354 aa11.63□□□□□ -0.55
TRAPPC4-206ENST00000525303 SLC15A5A6NIM6 579 aa11.63□□□□□ -0.55
TRAPPC4-206ENST00000525303 CENPBP07199 599 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC4-206ENST00000525303 PTPREP23469 700 aa11.63□□□□□ -0.55
TRAPPC4-206ENST00000525303 CNGA1P29973 690 aa11.63□□□□□ -0.55
TRAPPC4-206ENST00000525303 SHMT1P34896 483 aa11.63□□□□□ -0.55
TRAPPC4-206ENST00000525303 PLCD1P51178 756 aa11.63□□□□□ -0.55
TRAPPC4-206ENST00000525303 MAP3K12Q12852 859 aa11.63□□□□□ -0.55
TRAPPC4-206ENST00000525303 LBX2Q6XYB7 198 aa11.63□□□□□ -0.55
TRAPPC4-206ENST00000525303 SENP6Q9GZR1 1112 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC4-206ENST00000525303 RPAP3Q9H6T3 665 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC4-206ENST00000525303 CABP5Q9NP86 173 aa11.63□□□□□ -0.55
TRAPPC4-206ENST00000525303 MTMR10Q9NXD2 777 aa11.63□□□□□ -0.55
TRAPPC4-206ENST00000525303 BTBD7Q9P203 1132 aa11.63□□□□□ -0.55
TRAPPC4-206ENST00000525303 IVNS1ABPQ9Y6Y0 642 aa11.63□□□□□ -0.55
TRAPPC4-206ENST00000525303 SPDYE16A6NNV3 312 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC4-206ENST00000525303 RLBP1P12271 317 aa11.62□□□□□ -0.55
TRAPPC4-206ENST00000525303 CYP2C19P33261 490 aa11.62□□□□□ -0.55
TRAPPC4-206ENST00000525303 ATP2B2Q01814 1243 aa11.62□□□□□ -0.55
TRAPPC4-206ENST00000525303 GRB14Q14449 540 aa11.62□□□□□ -0.55
TRAPPC4-206ENST00000525303 AACSQ86V21 672 aa11.62□□□□□ -0.55
TRAPPC4-206ENST00000525303 NPLOC4Q8TAT6 608 aa11.62□□□□□ -0.55
TRAPPC4-206ENST00000525303 RIOK1Q9BRS2 568 aaKnown RBP11.62□□□□□ -0.55
TRAPPC4-206ENST00000525303 DDX20Q9UHI6 824 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms