RNA–Protein interactions for RNA: ENST00000522777.1

PCM1-216, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-216ENST00000522777 ANKS3Q6ZW76 656 aa9.14□□□□□ -0.95
PCM1-216ENST00000522777 CYFIP1Q7L576 1253 aa9.14□□□□□ -0.95
PCM1-216ENST00000522777 SVOPQ8N4V2 548 aa9.14□□□□□ -0.95
PCM1-216ENST00000522777 RBBP8NLQ8NC74 664 aaPredicted RBP9.14□□□□□ -0.95
PCM1-216ENST00000522777 NEDD1Q8NHV4 660 aa9.14□□□□□ -0.95
PCM1-216ENST00000522777 PIF1Q9H611 641 aa9.14□□□□□ -0.95
PCM1-216ENST00000522777 RTEL1-TNFRSF6BF6WH68 1400 aa9.14□□□□□ -0.95
PCM1-216ENST00000522777 SYNGAP1Q96PV0 1343 aa9.13□□□□□ -0.95
PCM1-216ENST00000522777 EIF6P56537 245 aaKnown RBP9.13□□□□□ -0.95
PCM1-216ENST00000522777 ZC3H12AQ5D1E8 599 aaKnown RBP9.13□□□□□ -0.95
PCM1-216ENST00000522777 HP1BP3Q5SSJ5 553 aaPredicted RBP9.13□□□□□ -0.95
PCM1-216ENST00000522777 LSRQ86X29 649 aaPredicted RBP9.13□□□□□ -0.95
PCM1-216ENST00000522777 DCAF11Q8TEB1 546 aa9.13□□□□□ -0.95
PCM1-216ENST00000522777 HNRNPLLQ8WVV9 542 aaKnown RBP9.13□□□□□ -0.95
PCM1-216ENST00000522777 CORINQ9Y5Q5 1042 aa9.13□□□□□ -0.95
PCM1-216ENST00000522777 TACC3Q9Y6A5 838 aa9.13□□□□□ -0.95
PCM1-216ENST00000522777 ZNF644Q9H582 1327 aaPredicted RBP9.12□□□□□ -0.95
PCM1-216ENST00000522777 SMAD7O15105 426 aaKnown RBP9.12□□□□□ -0.95
PCM1-216ENST00000522777 AOC2O75106 756 aa9.12□□□□□ -0.95
PCM1-216ENST00000522777 HTR3BO95264 441 aa9.12□□□□□ -0.95
PCM1-216ENST00000522777 IMPDH2P12268 514 aa9.12□□□□□ -0.95
PCM1-216ENST00000522777 GIMAP6Q6P9H5 292 aa9.12□□□□□ -0.95
PCM1-216ENST00000522777 HDXQ7Z353 690 aa9.12□□□□□ -0.95
PCM1-216ENST00000522777 OR6P1Q8NGX9 317 aa9.12□□□□□ -0.95
PCM1-216ENST00000522777 ENAMQ9NRM1 1142 aa9.12□□□□□ -0.95
PCM1-216ENST00000522777 STRCP1A6NGW2 1772 aa9.12□□□□□ -0.95
PCM1-216ENST00000522777 MEIS3P2A8K0S8 358 aa9.11□□□□□ -0.95
PCM1-216ENST00000522777 DCDC2CA8MYV0 355 aa9.11□□□□□ -0.95
PCM1-216ENST00000522777 HNRNPUQ00839 825 aaKnown RBP eCLIP9.11□□□□□ -0.95
PCM1-216ENST00000522777 RING1Q06587 406 aa9.11□□□□□ -0.95
PCM1-216ENST00000522777 RAB33AQ14088 237 aa9.11□□□□□ -0.95
PCM1-216ENST00000522777 FBXW10Q5XX13 1052 aa9.11□□□□□ -0.95
PCM1-216ENST00000522777 KIAA1211Q6ZU35 1233 aa9.11□□□□□ -0.95
PCM1-216ENST00000522777 ELMO3Q96BJ8 720 aa9.11□□□□□ -0.95
PCM1-216ENST00000522777 TMPRSS13Q9BYE2 586 aa9.11□□□□□ -0.95
PCM1-216ENST00000522777 MBD5Q9P267 1494 aa9.1□□□□□ -0.95
PCM1-216ENST00000522777 TMPRSS2O15393 492 aa9.1□□□□□ -0.95
PCM1-216ENST00000522777 LORP23490 312 aaPredicted RBP9.1□□□□□ -0.95
PCM1-216ENST00000522777 RAC1P63000 192 aa9.1□□□□□ -0.95
PCM1-216ENST00000522777 DUOXA2Q1HG44 320 aa9.1□□□□□ -0.95
PCM1-216ENST00000522777 TNNI3KQ59H18 835 aa9.1□□□□□ -0.95
PCM1-216ENST00000522777 EXOSC6Q5RKV6 272 aaKnown RBP9.1□□□□□ -0.95
PCM1-216ENST00000522777 PLVAPQ9BX97 442 aa9.1□□□□□ -0.95
PCM1-216ENST00000522777 ANTXR1Q9H6X2 564 aa9.1□□□□□ -0.95
PCM1-216ENST00000522777 ZSWIM4Q9H7M6 989 aa9.1□□□□□ -0.95
PCM1-216ENST00000522777 SCAF11Q99590 1463 aaKnown RBP9.09□□□□□ -0.95
PCM1-216ENST00000522777 FYCO1Q9BQS8 1478 aa9.09□□□□□ -0.95
PCM1-216ENST00000522777 SETD1AO15047 1707 aaKnown RBP9.09□□□□□ -0.95
PCM1-216ENST00000522777 GNB5O14775 395 aa9.09□□□□□ -0.95
PCM1-216ENST00000522777 DNAJA2O60884 412 aa9.09□□□□□ -0.95
PCM1-216ENST00000522777 LTKP29376 864 aa9.09□□□□□ -0.95
PCM1-216ENST00000522777 ZNF772Q68DY9 489 aaPredicted RBP9.09□□□□□ -0.95
PCM1-216ENST00000522777 NOP9Q86U38 636 aaKnown RBP9.09□□□□□ -0.95
PCM1-216ENST00000522777 C12orf40Q86WS4 652 aa9.09□□□□□ -0.95
PCM1-216ENST00000522777 PPP1R9AQ9ULJ8 1098 aa9.09□□□□□ -0.95
PCM1-216ENST00000522777 HIF3AQ9Y2N7 669 aa9.09□□□□□ -0.95
PCM1-216ENST00000522777 EID1Q9Y6B2 187 aa9.09□□□□□ -0.95
PCM1-216ENST00000522777 TMEM94Q12767 1356 aa9.09□□□□□ -0.95
PCM1-216ENST00000522777 MTUS2Q5JR59 1369 aa9.09□□□□□ -0.95
PCM1-216ENST00000522777 MEGF11A6BM72 1044 aa9.08□□□□□ -0.96
PCM1-216ENST00000522777 FAM229AH3BQW9 127 aa9.08□□□□□ -0.96
PCM1-216ENST00000522777 WIPF1O43516 503 aa9.08□□□□□ -0.96
PCM1-216ENST00000522777 NTF4P34130 210 aa9.08□□□□□ -0.96
PCM1-216ENST00000522777 ERVK-24P63145 666 aa9.08□□□□□ -0.96
PCM1-216ENST00000522777 ID3Q02535 119 aa9.08□□□□□ -0.96
PCM1-216ENST00000522777 TMEM201Q5SNT2 666 aa9.08□□□□□ -0.96
PCM1-216ENST00000522777 MEX3CQ5U5Q3 659 aaKnown RBP9.08□□□□□ -0.96
PCM1-216ENST00000522777 TMEM40Q8WWA1 233 aa9.08□□□□□ -0.96
PCM1-216ENST00000522777 CRBNQ96SW2 442 aa9.08□□□□□ -0.96
PCM1-216ENST00000522777 RUSC1Q9BVN2 902 aa9.08□□□□□ -0.96
PCM1-216ENST00000522777 REV1Q9UBZ9 1251 aa9.08□□□□□ -0.96
PCM1-216ENST00000522777 CSADQ9Y600 493 aa9.08□□□□□ -0.96
PCM1-216ENST00000522777 JCADQ9P266 1359 aa9.08□□□□□ -0.96
PCM1-216ENST00000522777 PRAMEF27A3QJZ7 478 aa9.07□□□□□ -0.96
PCM1-216ENST00000522777 SMARCA5O60264 1052 aaPredicted RBP9.07□□□□□ -0.96
PCM1-216ENST00000522777 SLFN14P0C7P3 912 aa9.07□□□□□ -0.96
PCM1-216ENST00000522777 GRK4P32298 578 aa9.07□□□□□ -0.96
PCM1-216ENST00000522777 BMS1Q14692 1282 aaKnown RBP9.07□□□□□ -0.96
PCM1-216ENST00000522777 ACAD11Q709F0 780 aa9.07□□□□□ -0.96
PCM1-216ENST00000522777 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.07□□□□□ -0.96
PCM1-216ENST00000522777 CELF2-AS1Q8N7Q2 184 aa9.07□□□□□ -0.96
PCM1-216ENST00000522777 MKL1Q969V6 931 aa9.07□□□□□ -0.96
PCM1-216ENST00000522777 SUGCTQ9HAC7 445 aa9.07□□□□□ -0.96
PCM1-216ENST00000522777 CRIM1Q9NZV1 1036 aa9.07□□□□□ -0.96
PCM1-216ENST00000522777 SIRPGQ9P1W8 387 aa9.07□□□□□ -0.96
PCM1-216ENST00000522777 MKL2Q9ULH7 1088 aa9.07□□□□□ -0.96
PCM1-216ENST00000522777 K7ELQ4 463 aaPredicted RBP9.06□□□□□ -0.96
PCM1-216ENST00000522777 ADH5P11766 374 aa9.06□□□□□ -0.96
PCM1-216ENST00000522777 ELNP15502 786 aa9.06□□□□□ -0.96
PCM1-216ENST00000522777 KCNA6P17658 529 aa9.06□□□□□ -0.96
PCM1-216ENST00000522777 CASP7P55210 303 aa9.06□□□□□ -0.96
PCM1-216ENST00000522777 PPM1JQ5JR12 505 aa9.06□□□□□ -0.96
PCM1-216ENST00000522777 ZBTB37Q5TC79 503 aa9.06□□□□□ -0.96
PCM1-216ENST00000522777 OVOS1Q6IE37 1185 aa9.06□□□□□ -0.96
PCM1-216ENST00000522777 RUFY4Q6ZNE9 571 aa9.06□□□□□ -0.96
PCM1-216ENST00000522777 C19orf47Q8N9M1 422 aaKnown RBP9.06□□□□□ -0.96
PCM1-216ENST00000522777 SMG8Q8ND04 991 aaKnown RBP9.06□□□□□ -0.96
PCM1-216ENST00000522777 TRIM55Q9BYV6 548 aa9.06□□□□□ -0.96
PCM1-216ENST00000522777 WNT10AQ9GZT5 417 aa9.06□□□□□ -0.96
PCM1-216ENST00000522777 RNF208Q9H0X6 261 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms