RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 SMCR8Q8TEV9 937 aaPredicted RBP24.69■■□□□ 1.54
TRIM35-203ENST00000521253 NACAP1Q9BZK3 213 aa24.69■■□□□ 1.54
TRIM35-203ENST00000521253 ARHGAP39Q9C0H5 1083 aa24.69■■□□□ 1.54
TRIM35-203ENST00000521253 FOXP2O15409 715 aa24.68■■□□□ 1.54
TRIM35-203ENST00000521253 ZYXQ15942 572 aaKnown RBP24.68■■□□□ 1.54
TRIM35-203ENST00000521253 FBXO46Q6PJ61 603 aaPredicted RBP24.68■■□□□ 1.54
TRIM35-203ENST00000521253 CCDC17Q96LX7 622 aa24.68■■□□□ 1.54
TRIM35-203ENST00000521253 ASCC2Q9H1I8 757 aaPredicted RBP24.68■■□□□ 1.54
TRIM35-203ENST00000521253 ROBO3Q96MS0 1386 aa24.67■■□□□ 1.54
TRIM35-203ENST00000521253 OSBPP22059 807 aa24.67■■□□□ 1.54
TRIM35-203ENST00000521253 NMIQ13287 307 aaPredicted RBP24.67■■□□□ 1.54
TRIM35-203ENST00000521253 KIF22Q14807 665 aa24.67■■□□□ 1.54
TRIM35-203ENST00000521253 STK11IPQ8N1F8 1099 aa24.67■■□□□ 1.54
TRIM35-203ENST00000521253 KIAA1683Q9H0B3 1180 aa24.67■■□□□ 1.54
TRIM35-203ENST00000521253 NAPBQ9H115 298 aa24.67■■□□□ 1.54
TRIM35-203ENST00000521253 HPS5Q9UPZ3 1129 aa24.67■■□□□ 1.54
TRIM35-203ENST00000521253 ECM2O94769 699 aaPredicted RBP24.66■■□□□ 1.54
TRIM35-203ENST00000521253 SDSP20132 328 aa24.66■■□□□ 1.54
TRIM35-203ENST00000521253 HOXA7P31268 230 aaPredicted RBP24.66■■□□□ 1.54
TRIM35-203ENST00000521253 ARHGEF6Q15052 776 aa24.66■■□□□ 1.54
TRIM35-203ENST00000521253 MCMDC2Q4G0Z9 681 aa24.66■■□□□ 1.54
TRIM35-203ENST00000521253 VPS53Q5VIR6 699 aa24.66■■□□□ 1.54
TRIM35-203ENST00000521253 C12orf42Q96LP6 360 aa24.66■■□□□ 1.54
TRIM35-203ENST00000521253 A0A1W2PRG0 241 aa24.65■■□□□ 1.54
TRIM35-203ENST00000521253 CCDC85CA6NKD9 419 aa24.65■■□□□ 1.54
TRIM35-203ENST00000521253 CTGFP29279 349 aa24.65■■□□□ 1.54
TRIM35-203ENST00000521253 USP14P54578 494 aa24.65■■□□□ 1.54
TRIM35-203ENST00000521253 CLEC10AQ8IUN9 316 aa24.65■■□□□ 1.54
TRIM35-203ENST00000521253 PTPN22Q9Y2R2 807 aa24.65■■□□□ 1.54
TRIM35-203ENST00000521253 RASA1P20936 1047 aa24.64■■□□□ 1.54
TRIM35-203ENST00000521253 IRX3P78415 501 aaPredicted RBP24.64■■□□□ 1.54
TRIM35-203ENST00000521253 ZNF589Q86UQ0 364 aaPredicted RBP24.64■■□□□ 1.54
TRIM35-203ENST00000521253 SIAH1Q8IUQ4 282 aa24.64■■□□□ 1.54
TRIM35-203ENST00000521253 MKNK2Q9HBH9 465 aa24.64■■□□□ 1.54
TRIM35-203ENST00000521253 GSPT1P15170 499 aaKnown RBP24.63■■□□□ 1.53
TRIM35-203ENST00000521253 PSMC4P43686 418 aa24.63■■□□□ 1.53
TRIM35-203ENST00000521253 ICA1Q05084 483 aa24.63■■□□□ 1.53
TRIM35-203ENST00000521253 TTC22Q5TAA0 569 aa24.63■■□□□ 1.53
TRIM35-203ENST00000521253 ANKRD13CQ8N6S4 541 aa24.63■■□□□ 1.53
TRIM35-203ENST00000521253 TRIM47Q96LD4 638 aa24.63■■□□□ 1.53
TRIM35-203ENST00000521253 VCAM1P19320 739 aa24.62■■□□□ 1.53
TRIM35-203ENST00000521253 GCLCP48506 637 aaPredicted RBP24.62■■□□□ 1.53
TRIM35-203ENST00000521253 PPARAQ07869 468 aa24.62■■□□□ 1.53
TRIM35-203ENST00000521253 P2RX7Q99572 595 aaKnown RBP24.62■■□□□ 1.53
TRIM35-203ENST00000521253 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.62■■□□□ 1.53
TRIM35-203ENST00000521253 PRDM1O75626 825 aa24.61■■□□□ 1.53
TRIM35-203ENST00000521253 FAM110CQ1W6H9 321 aa24.61■■□□□ 1.53
TRIM35-203ENST00000521253 KANSL2Q9H9L4 492 aa24.61■■□□□ 1.53
TRIM35-203ENST00000521253 ARHGEF10LQ9HCE6 1279 aa24.61■■□□□ 1.53
TRIM35-203ENST00000521253 CCDC171Q6TFL3 1326 aa24.61■■□□□ 1.53
TRIM35-203ENST00000521253 CENPFP49454 3210 aa24.6■■□□□ 1.53
TRIM35-203ENST00000521253 FMNL1O95466 1100 aaPredicted RBP24.6■■□□□ 1.53
TRIM35-203ENST00000521253 GNRH1P01148 92 aa24.6■■□□□ 1.53
TRIM35-203ENST00000521253 HERVK_113P62684 666 aa24.6■■□□□ 1.53
TRIM35-203ENST00000521253 ALX1Q15699 326 aa24.6■■□□□ 1.53
TRIM35-203ENST00000521253 CWC27Q6UX04 472 aaKnown RBP24.6■■□□□ 1.53
TRIM35-203ENST00000521253 ZNF287Q9HBT7 754 aa24.6■■□□□ 1.53
TRIM35-203ENST00000521253 DIAPH3Q9NSV4 1193 aa24.6■■□□□ 1.53
TRIM35-203ENST00000521253 ZSWIM8A7E2V4 1837 aa24.6■■□□□ 1.53
TRIM35-203ENST00000521253 USP17L15C9J2P7 530 aa24.59■■□□□ 1.53
TRIM35-203ENST00000521253 USP17L13C9JLJ4 530 aa24.59■■□□□ 1.53
TRIM35-203ENST00000521253 USP17L11C9JVI0 530 aa24.59■■□□□ 1.53
TRIM35-203ENST00000521253 USP17L18D6R9N7 530 aa24.59■■□□□ 1.53
TRIM35-203ENST00000521253 USP17L22D6RA61 530 aa24.59■■□□□ 1.53
TRIM35-203ENST00000521253 USP17L17D6RBQ6 530 aa24.59■■□□□ 1.53
TRIM35-203ENST00000521253 USP17L19D6RCP7 530 aa24.59■■□□□ 1.53
TRIM35-203ENST00000521253 USP17L20D6RJB6 530 aa24.59■■□□□ 1.53
TRIM35-203ENST00000521253 HIP1O00291 1037 aa24.59■■□□□ 1.53
TRIM35-203ENST00000521253 SLC3A2P08195 630 aaKnown RBP24.59■■□□□ 1.53
TRIM35-203ENST00000521253 HSPD1P10809 573 aaKnown RBP24.59■■□□□ 1.53
TRIM35-203ENST00000521253 EEF2P13639 858 aaKnown RBP24.59■■□□□ 1.53
TRIM35-203ENST00000521253 FCGRTP55899 365 aa24.59■■□□□ 1.53
TRIM35-203ENST00000521253 USP17L24Q0WX57 530 aa24.59■■□□□ 1.53
TRIM35-203ENST00000521253 TMX2Q9Y320 296 aa24.59■■□□□ 1.53
TRIM35-203ENST00000521253 MYH8P13535 1937 aa24.59■■□□□ 1.53
TRIM35-203ENST00000521253 ATP2B2Q01814 1243 aa24.58■■□□□ 1.53
TRIM35-203ENST00000521253 PDE4BQ07343 736 aa24.58■■□□□ 1.53
TRIM35-203ENST00000521253 KIAA1755Q5JYT7 1200 aa24.58■■□□□ 1.53
TRIM35-203ENST00000521253 CATSPERGQ6ZRH7 1159 aa24.58■■□□□ 1.53
TRIM35-203ENST00000521253 ZNF444Q8N0Y2 327 aaPredicted RBP24.58■■□□□ 1.53
TRIM35-203ENST00000521253 RPAP3Q9H6T3 665 aaPredicted RBP24.58■■□□□ 1.53
TRIM35-203ENST00000521253 SH2D4AQ9H788 454 aa24.58■■□□□ 1.53
TRIM35-203ENST00000521253 PTCH2Q9Y6C5 1203 aa24.58■■□□□ 1.53
TRIM35-203ENST00000521253 FGAP02671 866 aa24.57■■□□□ 1.52
TRIM35-203ENST00000521253 CTDSPL2Q05D32 466 aa24.57■■□□□ 1.52
TRIM35-203ENST00000521253 SRRDQ9UH36 339 aa24.57■■□□□ 1.52
TRIM35-203ENST00000521253 PEX10O60683 326 aa24.56■■□□□ 1.52
TRIM35-203ENST00000521253 MFAP1P55081 439 aaKnown RBP24.56■■□□□ 1.52
TRIM35-203ENST00000521253 PRMT2P55345 433 aa24.56■■□□□ 1.52
TRIM35-203ENST00000521253 POTEEQ6S8J3 1075 aa24.56■■□□□ 1.52
TRIM35-203ENST00000521253 CENPQQ7L2Z9 268 aaPredicted RBP24.56■■□□□ 1.52
TRIM35-203ENST00000521253 VCPKMTQ9H867 229 aa24.56■■□□□ 1.52
TRIM35-203ENST00000521253 TXNRD2Q9NNW7 524 aa24.56■■□□□ 1.52
TRIM35-203ENST00000521253 MORF4L1Q9UBU8 362 aa24.56■■□□□ 1.52
TRIM35-203ENST00000521253 ANAPC4Q9UJX5 808 aa24.56■■□□□ 1.52
TRIM35-203ENST00000521253 IGKV6D-41A0A0C4DH26 115 aa24.55■■□□□ 1.52
TRIM35-203ENST00000521253 HOXD10P28358 340 aa24.55■■□□□ 1.52
TRIM35-203ENST00000521253 SPICE1Q8N0Z3 855 aa24.55■■□□□ 1.52
TRIM35-203ENST00000521253 LPAR1Q92633 364 aa24.55■■□□□ 1.52
TRIM35-203ENST00000521253 INCENPQ9NQS7 918 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms