RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 NMIQ13287 307 aaPredicted RBP15.95■□□□□ 0.14
VEGFA-219ENST00000518824 PKN2Q16513 984 aaKnown RBP15.95■□□□□ 0.14
VEGFA-219ENST00000518824 ANKRD13CQ8N6S4 541 aa15.95■□□□□ 0.14
VEGFA-219ENST00000518824 RILPL2Q969X0 211 aa15.95■□□□□ 0.14
VEGFA-219ENST00000518824 CABP5Q9NP86 173 aa15.95■□□□□ 0.14
VEGFA-219ENST00000518824 SWAP70Q9UH65 585 aa15.95■□□□□ 0.14
VEGFA-219ENST00000518824 TACC3Q9Y6A5 838 aa15.95■□□□□ 0.14
VEGFA-219ENST00000518824 C19orf81C9J6K1 198 aa15.94■□□□□ 0.14
VEGFA-219ENST00000518824 PSMC4P43686 418 aa15.94■□□□□ 0.14
VEGFA-219ENST00000518824 GIMAP6Q6P9H5 292 aa15.94■□□□□ 0.14
VEGFA-219ENST00000518824 USP17L2Q6R6M4 530 aa15.94■□□□□ 0.14
VEGFA-219ENST00000518824 ZNF589Q86UQ0 364 aaPredicted RBP15.94■□□□□ 0.14
VEGFA-219ENST00000518824 DDRGK1Q96HY6 314 aa15.94■□□□□ 0.14
VEGFA-219ENST00000518824 P2RX7Q99572 595 aaKnown RBP15.94■□□□□ 0.14
VEGFA-219ENST00000518824 FEZ1Q99689 392 aa15.94■□□□□ 0.14
VEGFA-219ENST00000518824 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.94■□□□□ 0.14
VEGFA-219ENST00000518824 TMOD4Q9NZQ9 345 aa15.94■□□□□ 0.14
VEGFA-219ENST00000518824 ARPP21Q9UBL0 812 aaPredicted RBP15.94■□□□□ 0.14
VEGFA-219ENST00000518824 PTCH2Q9Y6C5 1203 aa15.94■□□□□ 0.14
VEGFA-219ENST00000518824 DOCK3Q8IZD9 2030 aa15.94■□□□□ 0.14
VEGFA-219ENST00000518824 GREB1LQ9C091 1923 aaPredicted RBP15.94■□□□□ 0.14
VEGFA-219ENST00000518824 HTTP42858 3142 aa15.93■□□□□ 0.14
VEGFA-219ENST00000518824 RASA1P20936 1047 aa15.93■□□□□ 0.14
VEGFA-219ENST00000518824 TDO2P48775 406 aa15.93■□□□□ 0.14
VEGFA-219ENST00000518824 SOX10P56693 466 aa15.93■□□□□ 0.14
VEGFA-219ENST00000518824 LRRFIP1Q32MZ4 808 aaKnown RBP15.93■□□□□ 0.14
VEGFA-219ENST00000518824 SKAP1Q86WV1 359 aa15.93■□□□□ 0.14
VEGFA-219ENST00000518824 SMCR8Q8TEV9 937 aaPredicted RBP15.93■□□□□ 0.14
VEGFA-219ENST00000518824 KIAA1683Q9H0B3 1180 aa15.93■□□□□ 0.14
VEGFA-219ENST00000518824 TXNRD2Q9NNW7 524 aa15.93■□□□□ 0.14
VEGFA-219ENST00000518824 INCENPQ9NQS7 918 aa15.93■□□□□ 0.14
VEGFA-219ENST00000518824 ROBO3Q96MS0 1386 aa15.92■□□□□ 0.14
VEGFA-219ENST00000518824 PRDM1O75626 825 aa15.92■□□□□ 0.14
VEGFA-219ENST00000518824 GSPT1P15170 499 aaKnown RBP15.92■□□□□ 0.14
VEGFA-219ENST00000518824 GNAT2P19087 354 aa15.92■□□□□ 0.14
VEGFA-219ENST00000518824 OSBPP22059 807 aa15.92■□□□□ 0.14
VEGFA-219ENST00000518824 HOXA7P31268 230 aaPredicted RBP15.92■□□□□ 0.14
VEGFA-219ENST00000518824 TMEM179Q6ZVK1 233 aa15.92■□□□□ 0.14
VEGFA-219ENST00000518824 C12orf42Q96LP6 360 aa15.92■□□□□ 0.14
VEGFA-219ENST00000518824 GABRQQ9UN88 632 aa15.92■□□□□ 0.14
VEGFA-219ENST00000518824 FMNL1O95466 1100 aaPredicted RBP15.91■□□□□ 0.14
VEGFA-219ENST00000518824 VCAM1P19320 739 aa15.91■□□□□ 0.14
VEGFA-219ENST00000518824 SDSP20132 328 aa15.91■□□□□ 0.14
VEGFA-219ENST00000518824 AMOTL1Q8IY63 956 aa15.91■□□□□ 0.14
VEGFA-219ENST00000518824 IL25Q9H293 177 aa15.91■□□□□ 0.14
VEGFA-219ENST00000518824 HELLSQ9NRZ9 838 aa15.91■□□□□ 0.14
VEGFA-219ENST00000518824 PNMA3Q9UL41 463 aa15.91■□□□□ 0.14
VEGFA-219ENST00000518824 RLFQ13129 1914 aa15.9■□□□□ 0.14
VEGFA-219ENST00000518824 EEF2P13639 858 aaKnown RBP15.9■□□□□ 0.14
VEGFA-219ENST00000518824 HERVK_113P62684 666 aa15.9■□□□□ 0.14
VEGFA-219ENST00000518824 IRX3P78415 501 aaPredicted RBP15.9■□□□□ 0.14
VEGFA-219ENST00000518824 ICA1Q05084 483 aa15.9■□□□□ 0.14
VEGFA-219ENST00000518824 CTDSPL2Q05D32 466 aa15.9■□□□□ 0.14
VEGFA-219ENST00000518824 PPARAQ07869 468 aa15.9■□□□□ 0.14
VEGFA-219ENST00000518824 KIF22Q14807 665 aa15.9■□□□□ 0.14
VEGFA-219ENST00000518824 Q3C1V9 767 aa15.9■□□□□ 0.14
VEGFA-219ENST00000518824 MCMDC2Q4G0Z9 681 aa15.9■□□□□ 0.14
VEGFA-219ENST00000518824 CCDC17Q96LX7 622 aa15.9■□□□□ 0.14
VEGFA-219ENST00000518824 NAPBQ9H115 298 aa15.9■□□□□ 0.14
VEGFA-219ENST00000518824 RPAP3Q9H6T3 665 aaPredicted RBP15.9■□□□□ 0.14
VEGFA-219ENST00000518824 RBPJLQ9UBG7 517 aa15.9■□□□□ 0.14
VEGFA-219ENST00000518824 CNMDO75829 334 aa15.89■□□□□ 0.13
VEGFA-219ENST00000518824 PRKCZQ05513 592 aa15.89■□□□□ 0.13
VEGFA-219ENST00000518824 PABPC4Q13310 644 aaKnown RBP eCLIP15.89■□□□□ 0.136e-13■■■■■ 112.3
VEGFA-219ENST00000518824 FAM110CQ1W6H9 321 aa15.89■□□□□ 0.13
VEGFA-219ENST00000518824 CATSPERGQ6ZRH7 1159 aa15.89■□□□□ 0.13
VEGFA-219ENST00000518824 SPICE1Q8N0Z3 855 aa15.89■□□□□ 0.13
VEGFA-219ENST00000518824 NKX2-3Q8TAU0 364 aa15.89■□□□□ 0.13
VEGFA-219ENST00000518824 SH3TC2Q8TF17 1288 aa15.89■□□□□ 0.13
VEGFA-219ENST00000518824 SRRDQ9UH36 339 aa15.89■□□□□ 0.13
VEGFA-219ENST00000518824 TMX2Q9Y320 296 aa15.89■□□□□ 0.13
VEGFA-219ENST00000518824 MYCP01106 439 aaPredicted RBP15.88■□□□□ 0.13
VEGFA-219ENST00000518824 HSPD1P10809 573 aaKnown RBP15.88■□□□□ 0.13
VEGFA-219ENST00000518824 ATP2B2Q01814 1243 aa15.88■□□□□ 0.13
VEGFA-219ENST00000518824 FAM47AQ5JRC9 791 aa15.88■□□□□ 0.13
VEGFA-219ENST00000518824 TTC22Q5TAA0 569 aa15.88■□□□□ 0.13
VEGFA-219ENST00000518824 PAGR1Q9BTK6 254 aa15.88■□□□□ 0.13
VEGFA-219ENST00000518824 NACAP1Q9BZK3 213 aa15.88■□□□□ 0.13
VEGFA-219ENST00000518824 MKNK2Q9HBH9 465 aa15.88■□□□□ 0.13
VEGFA-219ENST00000518824 PLXNB2O15031 1838 aa15.88■□□□□ 0.13
VEGFA-219ENST00000518824 CCDC171Q6TFL3 1326 aa15.88■□□□□ 0.13
VEGFA-219ENST00000518824 MYPNQ86TC9 1320 aa15.88■□□□□ 0.13
VEGFA-219ENST00000518824 PARP14Q460N5 1801 aa15.87■□□□□ 0.13
VEGFA-219ENST00000518824 IGKV6D-41A0A0C4DH26 115 aa15.87■□□□□ 0.13
VEGFA-219ENST00000518824 USP17L15C9J2P7 530 aa15.87■□□□□ 0.13
VEGFA-219ENST00000518824 USP17L13C9JLJ4 530 aa15.87■□□□□ 0.13
VEGFA-219ENST00000518824 USP17L11C9JVI0 530 aa15.87■□□□□ 0.13
VEGFA-219ENST00000518824 USP17L18D6R9N7 530 aa15.87■□□□□ 0.13
VEGFA-219ENST00000518824 USP17L22D6RA61 530 aa15.87■□□□□ 0.13
VEGFA-219ENST00000518824 USP17L17D6RBQ6 530 aa15.87■□□□□ 0.13
VEGFA-219ENST00000518824 USP17L19D6RCP7 530 aa15.87■□□□□ 0.13
VEGFA-219ENST00000518824 USP17L20D6RJB6 530 aa15.87■□□□□ 0.13
VEGFA-219ENST00000518824 FGAP02671 866 aa15.87■□□□□ 0.13
VEGFA-219ENST00000518824 GCLCP48506 637 aaPredicted RBP15.87■□□□□ 0.13
VEGFA-219ENST00000518824 USP14P54578 494 aa15.87■□□□□ 0.13
VEGFA-219ENST00000518824 FCGRTP55899 365 aa15.87■□□□□ 0.13
VEGFA-219ENST00000518824 USP17L24Q0WX57 530 aa15.87■□□□□ 0.13
VEGFA-219ENST00000518824 CWC27Q6UX04 472 aaKnown RBP15.87■□□□□ 0.13
VEGFA-219ENST00000518824 MORF4L1Q9UBU8 362 aa15.87■□□□□ 0.13
VEGFA-219ENST00000518824 TAOK2Q9UL54 1235 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms