RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 IGF2BP3O00425 579 aaKnown RBP eCLIP5.86□□□□□ -1.47
VPS13B-207ENST00000518569 FAM87AP0C7U9 286 aa5.86□□□□□ -1.47
VPS13B-207ENST00000518569 RAG1P15918 1043 aa5.86□□□□□ -1.47
VPS13B-207ENST00000518569 SSTR4P31391 388 aa5.86□□□□□ -1.47
VPS13B-207ENST00000518569 LETMD1Q6P1Q0 360 aa5.86□□□□□ -1.47
VPS13B-207ENST00000518569 CCDC81Q6ZN84 652 aa5.86□□□□□ -1.47
VPS13B-207ENST00000518569 FAM214BQ7L5A3 538 aa5.86□□□□□ -1.47
VPS13B-207ENST00000518569 LSRQ86X29 649 aaPredicted RBP5.86□□□□□ -1.47
VPS13B-207ENST00000518569 ZDHHC13Q8IUH4 622 aa5.86□□□□□ -1.47
VPS13B-207ENST00000518569 FBXL6Q8N531 539 aa5.86□□□□□ -1.47
VPS13B-207ENST00000518569 C19orf47Q8N9M1 422 aaKnown RBP5.86□□□□□ -1.47
VPS13B-207ENST00000518569 MIPEPQ99797 713 aa5.86□□□□□ -1.47
VPS13B-207ENST00000518569 DPH2Q9BQC3 489 aaPredicted RBP5.86□□□□□ -1.47
VPS13B-207ENST00000518569 ANTXR1Q9H6X2 564 aa5.86□□□□□ -1.47
VPS13B-207ENST00000518569 ATG3Q9NT62 314 aa5.86□□□□□ -1.47
VPS13B-207ENST00000518569 CEP131Q9UPN4 1083 aa5.86□□□□□ -1.47
VPS13B-207ENST00000518569 KRTAP9-6A0A140TA67 174 aa5.85□□□□□ -1.47
VPS13B-207ENST00000518569 FAM170BA6NMN3 283 aa5.85□□□□□ -1.47
VPS13B-207ENST00000518569 WDR64B1ANS9 1081 aa5.85□□□□□ -1.47
VPS13B-207ENST00000518569 LEFTY1O75610 366 aa5.85□□□□□ -1.47
VPS13B-207ENST00000518569 EOMESO95936 686 aa5.85□□□□□ -1.47
VPS13B-207ENST00000518569 CYP7A1P22680 504 aa5.85□□□□□ -1.47
VPS13B-207ENST00000518569 GUCY2CP25092 1073 aa5.85□□□□□ -1.47
VPS13B-207ENST00000518569 ETV3P41162 512 aa5.85□□□□□ -1.47
VPS13B-207ENST00000518569 PHACTR4Q8IZ21 702 aa5.85□□□□□ -1.47
VPS13B-207ENST00000518569 DNAJB8Q8NHS0 232 aa5.85□□□□□ -1.47
VPS13B-207ENST00000518569 PPP1R13LQ8WUF5 828 aa5.85□□□□□ -1.47
VPS13B-207ENST00000518569 SREK1Q8WXA9 508 aaKnown RBP5.85□□□□□ -1.47
VPS13B-207ENST00000518569 OSBPL1AQ9BXW6 950 aa5.85□□□□□ -1.47
VPS13B-207ENST00000518569 TANGO6Q9C0B7 1094 aa5.85□□□□□ -1.47
VPS13B-207ENST00000518569 MKNK2Q9HBH9 465 aa5.85□□□□□ -1.47
VPS13B-207ENST00000518569 GTF2IRD1Q9UHL9 959 aa5.85□□□□□ -1.47
VPS13B-207ENST00000518569 MAPK8IP1Q9UQF2 711 aa5.85□□□□□ -1.47
VPS13B-207ENST00000518569 SLC12A7Q9Y666 1083 aa5.85□□□□□ -1.47
VPS13B-207ENST00000518569 ATP2B1P20020 1258 aa5.84□□□□□ -1.47
VPS13B-207ENST00000518569 GBP1P32455 592 aa5.84□□□□□ -1.47
VPS13B-207ENST00000518569 CASP7P55210 303 aa5.84□□□□□ -1.47
VPS13B-207ENST00000518569 TNNI3KQ59H18 835 aa5.84□□□□□ -1.47
VPS13B-207ENST00000518569 C22orf34Q6ZV56 151 aa5.84□□□□□ -1.47
VPS13B-207ENST00000518569 ZNF765Q7L2R6 523 aa5.84□□□□□ -1.47
VPS13B-207ENST00000518569 SHISA5Q8N114 240 aa5.84□□□□□ -1.47
VPS13B-207ENST00000518569 RIN3Q8TB24 985 aa5.84□□□□□ -1.47
VPS13B-207ENST00000518569 XAGE3Q8WTP9 111 aa5.84□□□□□ -1.47
VPS13B-207ENST00000518569 KIF2CQ99661 725 aa5.84□□□□□ -1.47
VPS13B-207ENST00000518569 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.84□□□□□ -1.47
VPS13B-207ENST00000518569 PRR19A6NJB7 356 aa5.83□□□□□ -1.48
VPS13B-207ENST00000518569 UBOX5O94941 541 aa5.83□□□□□ -1.48
VPS13B-207ENST00000518569 BAHD1Q8TBE0 780 aaPredicted RBP5.83□□□□□ -1.48
VPS13B-207ENST00000518569 DHRS1Q96LJ7 313 aa5.83□□□□□ -1.48
VPS13B-207ENST00000518569 SLC9A7Q96T83 725 aa5.83□□□□□ -1.48
VPS13B-207ENST00000518569 PRDM5Q9NQX1 630 aaPredicted RBP5.83□□□□□ -1.48
VPS13B-207ENST00000518569 PIM2Q9P1W9 311 aa5.83□□□□□ -1.48
VPS13B-207ENST00000518569 PRKAG3Q9UGI9 489 aa5.83□□□□□ -1.48
VPS13B-207ENST00000518569 LEMD3Q9Y2U8 911 aa5.83□□□□□ -1.48
VPS13B-207ENST00000518569 ACRP10323 421 aa5.82□□□□□ -1.48
VPS13B-207ENST00000518569 ETFBP38117 255 aa5.82□□□□□ -1.48
VPS13B-207ENST00000518569 KIR3DL1P43629 444 aa5.82□□□□□ -1.48
VPS13B-207ENST00000518569 SFRP5Q5T4F7 317 aa5.82□□□□□ -1.48
VPS13B-207ENST00000518569 CDH24Q86UP0 819 aa5.82□□□□□ -1.48
VPS13B-207ENST00000518569 RNF141Q8WVD5 230 aa5.82□□□□□ -1.48
VPS13B-207ENST00000518569 ANAPC16Q96DE5 110 aa5.82□□□□□ -1.48
VPS13B-207ENST00000518569 VWCEQ96DN2 955 aa5.82□□□□□ -1.48
VPS13B-207ENST00000518569 DRC1Q96MC2 740 aa5.82□□□□□ -1.48
VPS13B-207ENST00000518569 FBXL18Q96ME1 805 aa5.82□□□□□ -1.48
VPS13B-207ENST00000518569 HEXIM2Q96MH2 286 aaKnown RBP5.82□□□□□ -1.48
VPS13B-207ENST00000518569 ZNF408Q9H9D4 720 aa5.82□□□□□ -1.48
VPS13B-207ENST00000518569 TPX2Q9ULW0 747 aaKnown RBP5.82□□□□□ -1.48
VPS13B-207ENST00000518569 COL17A1Q9UMD9 1497 aaPredicted RBP5.82□□□□□ -1.48
VPS13B-207ENST00000518569 A0A1W2PQH9 124 aa5.81□□□□□ -1.48
VPS13B-207ENST00000518569 STK10O94804 968 aaKnown RBP5.81□□□□□ -1.48
VPS13B-207ENST00000518569 ZNF865P0CJ78 1059 aaPredicted RBP5.81□□□□□ -1.48
VPS13B-207ENST00000518569 FOSL1P15407 271 aa5.81□□□□□ -1.48
VPS13B-207ENST00000518569 OXCT1P55809 520 aa5.81□□□□□ -1.48
VPS13B-207ENST00000518569 CHMP4BP1P59074 171 aa5.81□□□□□ -1.48
VPS13B-207ENST00000518569 RBL2Q08999 1139 aa5.81□□□□□ -1.48
VPS13B-207ENST00000518569 INTS5Q6P9B9 1019 aaKnown RBP5.81□□□□□ -1.48
VPS13B-207ENST00000518569 UNC5AQ6ZN44 842 aa5.81□□□□□ -1.48
VPS13B-207ENST00000518569 RUFY4Q6ZNE9 571 aa5.81□□□□□ -1.48
VPS13B-207ENST00000518569 TTC6Q86TZ1 520 aa5.81□□□□□ -1.48
VPS13B-207ENST00000518569 FAM169BQ8N8A8 192 aa5.81□□□□□ -1.48
VPS13B-207ENST00000518569 KREMEN1Q96MU8 473 aa5.81□□□□□ -1.48
VPS13B-207ENST00000518569 ASPNQ9BXN1 380 aa5.81□□□□□ -1.48
VPS13B-207ENST00000518569 MRVI1Q9Y6F6 885 aa5.81□□□□□ -1.48
VPS13B-207ENST00000518569 CYP26A1O43174 497 aa5.8□□□□□ -1.48
VPS13B-207ENST00000518569 CLEC3AO75596 197 aa5.8□□□□□ -1.48
VPS13B-207ENST00000518569 POLR2BP30876 1174 aaKnown RBP5.8□□□□□ -1.48
VPS13B-207ENST00000518569 GRIK1P39086 918 aa5.8□□□□□ -1.48
VPS13B-207ENST00000518569 RNF4P78317 190 aa5.8□□□□□ -1.48
VPS13B-207ENST00000518569 MCTP1Q6DN14 999 aa5.8□□□□□ -1.48
VPS13B-207ENST00000518569 SMARCC1Q92922 1105 aaPredicted RBP5.8□□□□□ -1.48
VPS13B-207ENST00000518569 HIRIP3Q9BW71 556 aaPredicted RBP5.8□□□□□ -1.48
VPS13B-207ENST00000518569 PHAXQ9H814 394 aaKnown RBP5.8□□□□□ -1.48
VPS13B-207ENST00000518569 CNTNAP4Q9C0A0 1308 aa5.79□□□□□ -1.48
VPS13B-207ENST00000518569 GNAT3A8MTJ3 354 aa5.79□□□□□ -1.48
VPS13B-207ENST00000518569 SMAD7O15105 426 aaKnown RBP5.79□□□□□ -1.48
VPS13B-207ENST00000518569 TGFB1P01137 390 aa5.79□□□□□ -1.48
VPS13B-207ENST00000518569 PMS1P54277 932 aaKnown RBP5.79□□□□□ -1.48
VPS13B-207ENST00000518569 BBS9Q3SYG4 887 aa5.79□□□□□ -1.48
VPS13B-207ENST00000518569 NBPF12Q5TAG4 269 aaPredicted RBP5.79□□□□□ -1.48
VPS13B-207ENST00000518569 SOGA3Q5TF21 947 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms