RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 PLEKHG6Q3KR16 790 aa7.8□□□□□ -1.16
CTNNA1-202ENST00000517533 PRAMEF13Q5VWM6 474 aa7.8□□□□□ -1.16
CTNNA1-202ENST00000517533 EXOC8Q8IYI6 725 aa7.8□□□□□ -1.16
CTNNA1-202ENST00000517533 C12orf50Q8NA57 414 aaPredicted RBP7.8□□□□□ -1.16
CTNNA1-202ENST00000517533 ZNF507Q8TCN5 953 aa7.8□□□□□ -1.16
CTNNA1-202ENST00000517533 PPP1R13LQ8WUF5 828 aa7.8□□□□□ -1.16
CTNNA1-202ENST00000517533 MRPL18Q9H0U6 180 aaKnown RBP7.8□□□□□ -1.16
CTNNA1-202ENST00000517533 ATXN3LQ9H3M9 355 aa7.8□□□□□ -1.16
CTNNA1-202ENST00000517533 PICK1Q9NRD5 415 aa7.8□□□□□ -1.16
CTNNA1-202ENST00000517533 FAM86C1Q9NVL1 165 aa7.8□□□□□ -1.16
CTNNA1-202ENST00000517533 SUSD2Q9UGT4 822 aa7.8□□□□□ -1.16
CTNNA1-202ENST00000517533 ZMYM5Q9UJ78 669 aa7.8□□□□□ -1.16
CTNNA1-202ENST00000517533 ZNF214Q9UL59 606 aaPredicted RBP7.8□□□□□ -1.16
CTNNA1-202ENST00000517533 COL17A1Q9UMD9 1497 aaPredicted RBP7.8□□□□□ -1.16
CTNNA1-202ENST00000517533 C9IYK1 514 aa7.79□□□□□ -1.16
CTNNA1-202ENST00000517533 RGS13O14921 159 aa7.79□□□□□ -1.16
CTNNA1-202ENST00000517533 PEX14O75381 377 aa7.79□□□□□ -1.16
CTNNA1-202ENST00000517533 COL8A1P27658 744 aa7.79□□□□□ -1.16
CTNNA1-202ENST00000517533 ASPAP45381 313 aa7.79□□□□□ -1.16
CTNNA1-202ENST00000517533 MLECQ14165 292 aa7.79□□□□□ -1.16
CTNNA1-202ENST00000517533 TDRD10Q5VZ19 366 aaKnown RBP7.79□□□□□ -1.16
CTNNA1-202ENST00000517533 SLC6A19Q695T7 634 aa7.79□□□□□ -1.16
CTNNA1-202ENST00000517533 KIAA1211LQ6NV74 962 aa7.79□□□□□ -1.16
CTNNA1-202ENST00000517533 JMYQ8N9B5 988 aa7.79□□□□□ -1.16
CTNNA1-202ENST00000517533 SLC6A18Q96N87 628 aa7.79□□□□□ -1.16
CTNNA1-202ENST00000517533 CYP4F12Q9HCS2 524 aa7.79□□□□□ -1.16
CTNNA1-202ENST00000517533 ENAMQ9NRM1 1142 aa7.79□□□□□ -1.16
CTNNA1-202ENST00000517533 FANCLQ9NW38 375 aa7.79□□□□□ -1.16
CTNNA1-202ENST00000517533 FAN1Q9Y2M0 1017 aa7.79□□□□□ -1.16
CTNNA1-202ENST00000517533 CST3P01034 146 aaPredicted RBP7.78□□□□□ -1.16
CTNNA1-202ENST00000517533 CAP2P40123 477 aa7.78□□□□□ -1.16
CTNNA1-202ENST00000517533 SLC10A6Q3KNW5 377 aa7.78□□□□□ -1.16
CTNNA1-202ENST00000517533 MTERF2Q49AM1 385 aa7.78□□□□□ -1.16
CTNNA1-202ENST00000517533 CDPF1Q6NVV7 123 aa7.78□□□□□ -1.16
CTNNA1-202ENST00000517533 TMEM130Q8N3G9 435 aa7.78□□□□□ -1.16
CTNNA1-202ENST00000517533 XAGE3Q8WTP9 111 aa7.78□□□□□ -1.16
CTNNA1-202ENST00000517533 STAG1Q8WVM7 1258 aa7.78□□□□□ -1.16
CTNNA1-202ENST00000517533 UBL7Q96S82 380 aaPredicted RBP7.78□□□□□ -1.16
CTNNA1-202ENST00000517533 IRF2BPLQ9H1B7 796 aa7.78□□□□□ -1.16
CTNNA1-202ENST00000517533 PHAXQ9H814 394 aaKnown RBP7.78□□□□□ -1.16
CTNNA1-202ENST00000517533 MKL2Q9ULH7 1088 aa7.78□□□□□ -1.16
CTNNA1-202ENST00000517533 G3BP2Q9UN86 482 aaKnown RBP7.78□□□□□ -1.16
CTNNA1-202ENST00000517533 KRBA1A5PL33 1030 aa7.77□□□□□ -1.17
CTNNA1-202ENST00000517533 DYNC1LI2O43237 492 aaPredicted RBP7.77□□□□□ -1.17
CTNNA1-202ENST00000517533 SUSD5O60279 629 aa7.77□□□□□ -1.17
CTNNA1-202ENST00000517533 RNGTTO60942 597 aaKnown RBP7.77□□□□□ -1.17
CTNNA1-202ENST00000517533 DNAJC6O75061 913 aa7.77□□□□□ -1.17
CTNNA1-202ENST00000517533 IFRD2Q12894 506 aaPredicted RBP7.77□□□□□ -1.17
CTNNA1-202ENST00000517533 TKFCQ3LXA3 575 aa7.77□□□□□ -1.17
CTNNA1-202ENST00000517533 PLEKHG4Q58EX7 1191 aa7.77□□□□□ -1.17
CTNNA1-202ENST00000517533 GORABQ5T7V8 394 aa7.77□□□□□ -1.17
CTNNA1-202ENST00000517533 Q6ZS46 218 aa7.77□□□□□ -1.17
CTNNA1-202ENST00000517533 PHACTR4Q8IZ21 702 aa7.77□□□□□ -1.17
CTNNA1-202ENST00000517533 RIN3Q8TB24 985 aa7.77□□□□□ -1.17
CTNNA1-202ENST00000517533 DCAF11Q8TEB1 546 aa7.77□□□□□ -1.17
CTNNA1-202ENST00000517533 ZNF512BQ96KM6 892 aaPredicted RBP7.77□□□□□ -1.17
CTNNA1-202ENST00000517533 LGR4Q9BXB1 951 aa7.77□□□□□ -1.17
CTNNA1-202ENST00000517533 ACSS3Q9H6R3 686 aa7.77□□□□□ -1.17
CTNNA1-202ENST00000517533 TMEM260Q9NX78 707 aa7.77□□□□□ -1.17
CTNNA1-202ENST00000517533 SLC12A7Q9Y666 1083 aa7.77□□□□□ -1.17
CTNNA1-202ENST00000517533 KDM2BQ8NHM5 1336 aa7.77□□□□□ -1.17
CTNNA1-202ENST00000517533 ADCY3O60266 1144 aa7.76□□□□□ -1.17
CTNNA1-202ENST00000517533 FAM153BP0C7A2 387 aa7.76□□□□□ -1.17
CTNNA1-202ENST00000517533 NOS3P29474 1203 aa7.76□□□□□ -1.17
CTNNA1-202ENST00000517533 YARSP54577 528 aaKnown RBP7.76□□□□□ -1.17
CTNNA1-202ENST00000517533 HNRNPUQ00839 825 aaKnown RBP eCLIP7.76□□□□□ -1.17
CTNNA1-202ENST00000517533 SLC7A5Q01650 507 aa7.76□□□□□ -1.17
CTNNA1-202ENST00000517533 GNPTABQ3T906 1256 aa7.76□□□□□ -1.17
CTNNA1-202ENST00000517533 C2orf27AQ580R0 203 aa7.76□□□□□ -1.17
CTNNA1-202ENST00000517533 ARMCX6Q7L4S7 300 aa7.76□□□□□ -1.17
CTNNA1-202ENST00000517533 TICAM2Q86XR7 235 aa7.76□□□□□ -1.17
CTNNA1-202ENST00000517533 SMYD4Q8IYR2 804 aaPredicted RBP7.76□□□□□ -1.17
CTNNA1-202ENST00000517533 ZNF513Q8N8E2 541 aaPredicted RBP7.76□□□□□ -1.17
CTNNA1-202ENST00000517533 ST13P5Q8NFI4 369 aaPredicted RBP7.76□□□□□ -1.17
CTNNA1-202ENST00000517533 DNAJB8Q8NHS0 232 aa7.76□□□□□ -1.17
CTNNA1-202ENST00000517533 SPC25Q9HBM1 224 aa7.76□□□□□ -1.17
CTNNA1-202ENST00000517533 SUCOQ9UBS9 1254 aaKnown RBP7.76□□□□□ -1.17
CTNNA1-202ENST00000517533 CCDC194A0A1B0GVG4 234 aa7.75□□□□□ -1.17
CTNNA1-202ENST00000517533 CBFA2T2O43439 604 aa7.75□□□□□ -1.17
CTNNA1-202ENST00000517533 WIPF1O43516 503 aa7.75□□□□□ -1.17
CTNNA1-202ENST00000517533 TP53P04637 393 aaPredicted RBP7.75□□□□□ -1.17
CTNNA1-202ENST00000517533 PMS1P54277 932 aaKnown RBP7.75□□□□□ -1.17
CTNNA1-202ENST00000517533 CHMP4BP1P59074 171 aa7.75□□□□□ -1.17
CTNNA1-202ENST00000517533 SSRP1Q08945 709 aaKnown RBP7.75□□□□□ -1.17
CTNNA1-202ENST00000517533 NCAPHQ15003 741 aa7.75□□□□□ -1.17
CTNNA1-202ENST00000517533 HSP90AB2PQ58FF8 381 aa7.75□□□□□ -1.17
CTNNA1-202ENST00000517533 AXDND1Q5T1B0 1012 aaPredicted RBP7.75□□□□□ -1.17
CTNNA1-202ENST00000517533 ANKRD34AQ69YU3 496 aa7.75□□□□□ -1.17
CTNNA1-202ENST00000517533 FDX2Q6P4F2 183 aa7.75□□□□□ -1.17
CTNNA1-202ENST00000517533 CYB5D2Q8WUJ1 264 aa7.75□□□□□ -1.17
CTNNA1-202ENST00000517533 CCDC74BQ96LY2 380 aa7.75□□□□□ -1.17
CTNNA1-202ENST00000517533 PSMG3-AS1Q96PY0 264 aa7.75□□□□□ -1.17
CTNNA1-202ENST00000517533 LGR6Q9HBX8 967 aa7.75□□□□□ -1.17
CTNNA1-202ENST00000517533 DDX56Q9NY93 547 aaKnown RBP7.75□□□□□ -1.17
CTNNA1-202ENST00000517533 GABBR1Q9UBS5 961 aa7.75□□□□□ -1.17
CTNNA1-202ENST00000517533 PTCH2Q9Y6C5 1203 aa7.75□□□□□ -1.17
CTNNA1-202ENST00000517533 CNTNAP4Q9C0A0 1308 aa7.75□□□□□ -1.17
CTNNA1-202ENST00000517533 SHOXO15266 292 aa7.74□□□□□ -1.17
CTNNA1-202ENST00000517533 RAB6AP20340 208 aa7.74□□□□□ -1.17
CTNNA1-202ENST00000517533 AMPD3Q01432 767 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms