RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 USPL1Q5W0Q7 1092 aa0.11□□□□□ -2.39
RNU6-1238P-201ENST00000517215 HEATR6Q6AI08 1181 aaKnown RBP0.11□□□□□ -2.39
RNU6-1238P-201ENST00000517215 LAIR1Q6GTX8 287 aa0.11□□□□□ -2.39
RNU6-1238P-201ENST00000517215 LRFN4Q6PJG9 635 aa0.11□□□□□ -2.39
RNU6-1238P-201ENST00000517215 GPRIN1Q7Z2K8 1008 aa0.11□□□□□ -2.39
RNU6-1238P-201ENST00000517215 TOP6BLQ8N6T0 577 aa0.11□□□□□ -2.39
RNU6-1238P-201ENST00000517215 GPR150Q8NGU9 434 aa0.11□□□□□ -2.39
RNU6-1238P-201ENST00000517215 ARHGEF1Q92888 912 aaKnown RBP0.11□□□□□ -2.39
RNU6-1238P-201ENST00000517215 ZBTB9Q96C00 473 aa0.11□□□□□ -2.39
RNU6-1238P-201ENST00000517215 CCDC85AQ96PX6 553 aaPredicted RBP0.11□□□□□ -2.39
RNU6-1238P-201ENST00000517215 WACQ9BTA9 647 aa0.11□□□□□ -2.39
RNU6-1238P-201ENST00000517215 SLC29A3Q9BZD2 475 aa0.11□□□□□ -2.39
RNU6-1238P-201ENST00000517215 FOXQ1Q9C009 403 aa0.11□□□□□ -2.39
RNU6-1238P-201ENST00000517215 PHACTR1Q9C0D0 580 aa0.11□□□□□ -2.39
RNU6-1238P-201ENST00000517215 ADAMTS10Q9H324 1103 aa0.11□□□□□ -2.39
RNU6-1238P-201ENST00000517215 SOX17Q9H6I2 414 aaPredicted RBP0.11□□□□□ -2.39
RNU6-1238P-201ENST00000517215 WDR70Q9NW82 654 aa0.11□□□□□ -2.39
RNU6-1238P-201ENST00000517215 PMF1-BGLAPU3KQ54 211 aa0.11□□□□□ -2.39
RNU6-1238P-201ENST00000517215 H3BS24 57 aa0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 MMP20O60882 483 aa0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 GPR37L1O60883 481 aa0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 GCP02774 474 aa0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 C1SP09871 688 aa0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 PFKLP17858 780 aa0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 RFX1P22670 979 aa0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 INPP5BP32019 993 aa0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 SARSP49591 514 aaKnown RBP0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 FOXG1P55316 489 aaPredicted RBP0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 KRTAP12-2P59991 146 aa0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 CHRNEQ04844 493 aa0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 CTDSPL2Q05D32 466 aa0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 TMEM62Q0P6H9 643 aa0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 FSTL1Q12841 308 aa0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 RAPGEF1Q13905 1077 aa0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 AKAP4Q5JQC9 854 aa0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 LCE3EQ5T5B0 92 aa0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 HGSNATQ68CP4 663 aa0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 KRTAP5-10Q6L8G5 202 aa0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 C22orf34Q6ZV56 151 aa0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 RD3Q7Z3Z2 195 aa0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 TMC6Q7Z403 805 aa0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 PLEKHH3Q7Z736 793 aa0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 FAM124AQ86V42 546 aa0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 SRRM1Q8IYB3 904 aaKnown RBP0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 REXO1Q8N1G1 1221 aaKnown RBP0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 Q8TCH9 128 aa0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 ADAMTS17Q8TE56 1095 aa0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 ADAMTS15Q8TE58 950 aa0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 EXTL1Q92935 676 aa0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 RGMAQ96B86 450 aa0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 CLIP3Q96DZ5 547 aa0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 SIRT1Q96EB6 747 aa0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 SPACA7Q96KW9 195 aa0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 ZNF778Q96MU6 729 aa0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 PBX4Q9BYU1 374 aa0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 NRSN2Q9GZP1 204 aa0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 RASSF4Q9H2L5 321 aa0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 QTRT2Q9H974 415 aaKnown RBP0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 NTMQ9P121 344 aa0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 DMGDHQ9UI17 866 aaKnown RBP0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 MAPK8IP1Q9UQF2 711 aa0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 TACC3Q9Y6A5 838 aa0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 OTOGLQ3ZCN5 2332 aa0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 SYNGAP1Q96PV0 1343 aa0.1□□□□□ -2.39
RNU6-1238P-201ENST00000517215 MUC16Q8WXI7 14507 aa0.09□□□□□ -2.39
RNU6-1238P-201ENST00000517215 CCDC187A0A096LP49 1063 aa0.09□□□□□ -2.4
RNU6-1238P-201ENST00000517215 ERI2A8K979 691 aaKnown RBP0.09□□□□□ -2.4
RNU6-1238P-201ENST00000517215 FAM155AB1AL88 458 aaPredicted RBP0.09□□□□□ -2.4
RNU6-1238P-201ENST00000517215 BACH1O14867 736 aa0.09□□□□□ -2.4
RNU6-1238P-201ENST00000517215 IRF6O14896 467 aa0.09□□□□□ -2.4
RNU6-1238P-201ENST00000517215 BMP15O95972 392 aa0.09□□□□□ -2.4
RNU6-1238P-201ENST00000517215 ESR1P03372 595 aa0.09□□□□□ -2.4
RNU6-1238P-201ENST00000517215 FBXO45P0C2W1 286 aa0.09□□□□□ -2.4
RNU6-1238P-201ENST00000517215 ARSDP51689 593 aa0.09□□□□□ -2.4
RNU6-1238P-201ENST00000517215 EPHB4P54760 987 aa0.09□□□□□ -2.4
RNU6-1238P-201ENST00000517215 EPHA4P54764 986 aa0.09□□□□□ -2.4
RNU6-1238P-201ENST00000517215 NCKAP1LP55160 1127 aa0.09□□□□□ -2.4
RNU6-1238P-201ENST00000517215 PSMA6P60900 246 aaKnown RBP0.09□□□□□ -2.4
RNU6-1238P-201ENST00000517215 HYAL2Q12891 473 aa0.09□□□□□ -2.4
RNU6-1238P-201ENST00000517215 RTL5Q5HYW3 569 aaPredicted RBP0.09□□□□□ -2.4
RNU6-1238P-201ENST00000517215 FAM26FQ5R3K3 315 aa0.09□□□□□ -2.4
RNU6-1238P-201ENST00000517215 ZNF425Q6IV72 752 aa0.09□□□□□ -2.4
RNU6-1238P-201ENST00000517215 SH2D6Q7Z4S9 175 aa0.09□□□□□ -2.4
RNU6-1238P-201ENST00000517215 NLRX1Q86UT6 975 aa0.09□□□□□ -2.4
RNU6-1238P-201ENST00000517215 TMPRSS12Q86WS5 348 aa0.09□□□□□ -2.4
RNU6-1238P-201ENST00000517215 SPPL2CQ8IUH8 684 aa0.09□□□□□ -2.4
RNU6-1238P-201ENST00000517215 SLC9A9Q8IVB4 645 aa0.09□□□□□ -2.4
RNU6-1238P-201ENST00000517215 ZC3H7AQ8IWR0 971 aaKnown RBP0.09□□□□□ -2.4
RNU6-1238P-201ENST00000517215 SMYD4Q8IYR2 804 aaPredicted RBP0.09□□□□□ -2.4
RNU6-1238P-201ENST00000517215 RPUSD2Q8IZ73 545 aaKnown RBP0.09□□□□□ -2.4
RNU6-1238P-201ENST00000517215 MFSD4AQ8N468 514 aa0.09□□□□□ -2.4
RNU6-1238P-201ENST00000517215 ANKS4BQ8N8V4 417 aa0.09□□□□□ -2.4
RNU6-1238P-201ENST00000517215 NR4A3Q92570 626 aa0.09□□□□□ -2.4
RNU6-1238P-201ENST00000517215 DHX38Q92620 1227 aaKnown RBP0.09□□□□□ -2.4
RNU6-1238P-201ENST00000517215 WBP2Q969T9 261 aa0.09□□□□□ -2.4
RNU6-1238P-201ENST00000517215 POP1Q99575 1024 aaKnown RBP0.09□□□□□ -2.4
RNU6-1238P-201ENST00000517215 R3HDMLQ9H3Y0 253 aa0.09□□□□□ -2.4
RNU6-1238P-201ENST00000517215 PIDD1Q9HB75 910 aa0.09□□□□□ -2.4
RNU6-1238P-201ENST00000517215 CRTAC1Q9NQ79 661 aa0.09□□□□□ -2.4
RNU6-1238P-201ENST00000517215 LIMD1Q9UGP4 676 aa0.09□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms