RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 ANTXR1Q9H6X2 564 aa8.94□□□□□ -0.98
SCARNA1-201ENST00000517138 PRDM7Q9NQW5 492 aa8.94□□□□□ -0.98
SCARNA1-201ENST00000517138 METTL5Q9NRN9 209 aaKnown RBP8.94□□□□□ -0.98
SCARNA1-201ENST00000517138 SEMA3GQ9NS98 782 aa8.94□□□□□ -0.98
SCARNA1-201ENST00000517138 CEP131Q9UPN4 1083 aa8.94□□□□□ -0.98
SCARNA1-201ENST00000517138 ST14Q9Y5Y6 855 aa8.94□□□□□ -0.98
SCARNA1-201ENST00000517138 ROBO2Q9HCK4 1378 aa8.94□□□□□ -0.98
SCARNA1-201ENST00000517138 COL17A1Q9UMD9 1497 aaPredicted RBP8.94□□□□□ -0.98
SCARNA1-201ENST00000517138 SLC22A31A6NKX4 558 aa8.93□□□□□ -0.98
SCARNA1-201ENST00000517138 WASH4PA8MWX3 477 aa8.93□□□□□ -0.98
SCARNA1-201ENST00000517138 IRAK1P51617 712 aa8.93□□□□□ -0.98
SCARNA1-201ENST00000517138 APOBRQ0VD83 1088 aa8.93□□□□□ -0.98
SCARNA1-201ENST00000517138 PLCL1Q15111 1095 aa8.93□□□□□ -0.98
SCARNA1-201ENST00000517138 DIEXFQ68CQ4 756 aaKnown RBP8.93□□□□□ -0.98
SCARNA1-201ENST00000517138 GK5Q6ZS86 529 aa8.93□□□□□ -0.98
SCARNA1-201ENST00000517138 C22orf34Q6ZV56 151 aa8.93□□□□□ -0.98
SCARNA1-201ENST00000517138 KIAA0825Q8IV33 1275 aa8.93□□□□□ -0.98
SCARNA1-201ENST00000517138 SLFN12Q8IYM2 578 aa8.93□□□□□ -0.98
SCARNA1-201ENST00000517138 KIF2CQ99661 725 aa8.93□□□□□ -0.98
SCARNA1-201ENST00000517138 NT5C1AQ9BXI3 368 aa8.93□□□□□ -0.98
SCARNA1-201ENST00000517138 SNX11Q9Y5W9 270 aa8.93□□□□□ -0.98
SCARNA1-201ENST00000517138 PITPNM2Q9BZ72 1349 aa8.93□□□□□ -0.98
SCARNA1-201ENST00000517138 FAM155AB1AL88 458 aaPredicted RBP8.92□□□□□ -0.98
SCARNA1-201ENST00000517138 H3BS24 57 aa8.92□□□□□ -0.98
SCARNA1-201ENST00000517138 LRRN2O75325 713 aa8.92□□□□□ -0.98
SCARNA1-201ENST00000517138 YARSP54577 528 aaKnown RBP8.92□□□□□ -0.98
SCARNA1-201ENST00000517138 CBLL1Q75N03 491 aa8.92□□□□□ -0.98
SCARNA1-201ENST00000517138 NKD1Q969G9 470 aa8.92□□□□□ -0.98
SCARNA1-201ENST00000517138 ATP13A1Q9HD20 1204 aa8.92□□□□□ -0.98
SCARNA1-201ENST00000517138 DDX41Q9UJV9 622 aaKnown RBP8.92□□□□□ -0.98
SCARNA1-201ENST00000517138 SCAMP3O14828 347 aaKnown RBP8.91□□□□□ -0.98
SCARNA1-201ENST00000517138 ATE1O95260 518 aa8.91□□□□□ -0.98
SCARNA1-201ENST00000517138 TAL1P17542 331 aaPredicted RBP8.91□□□□□ -0.98
SCARNA1-201ENST00000517138 FUT4P22083 530 aa8.91□□□□□ -0.98
SCARNA1-201ENST00000517138 POLR2BP30876 1174 aaKnown RBP8.91□□□□□ -0.98
SCARNA1-201ENST00000517138 MCM4P33991 863 aa8.91□□□□□ -0.98
SCARNA1-201ENST00000517138 HDLBPQ00341 1268 aaKnown RBP8.91□□□□□ -0.98
SCARNA1-201ENST00000517138 ZNF792Q3KQV3 632 aa8.91□□□□□ -0.98
SCARNA1-201ENST00000517138 ARSHQ5FYA8 562 aa8.91□□□□□ -0.98
SCARNA1-201ENST00000517138 MCTP1Q6DN14 999 aa8.91□□□□□ -0.98
SCARNA1-201ENST00000517138 SLITRK4Q8IW52 837 aa8.91□□□□□ -0.98
SCARNA1-201ENST00000517138 MBNL3Q9NUK0 354 aaKnown RBP8.91□□□□□ -0.98
SCARNA1-201ENST00000517138 CLCN7P51798 805 aa8.9□□□□□ -0.98
SCARNA1-201ENST00000517138 OVOS1Q6IE37 1185 aa8.9□□□□□ -0.98
SCARNA1-201ENST00000517138 AGBL5Q8NDL9 886 aa8.9□□□□□ -0.98
SCARNA1-201ENST00000517138 EHMT1Q9H9B1 1298 aa8.9□□□□□ -0.98
SCARNA1-201ENST00000517138 CCDC9Q9Y3X0 531 aaKnown RBP8.9□□□□□ -0.98
SCARNA1-201ENST00000517138 RNASE1P07998 156 aaKnown RBP8.89□□□□□ -0.99
SCARNA1-201ENST00000517138 ETV3P41162 512 aa8.89□□□□□ -0.99
SCARNA1-201ENST00000517138 IKZF1Q13422 519 aa8.89□□□□□ -0.99
SCARNA1-201ENST00000517138 ZNF746Q6NUN9 644 aaPredicted RBP8.89□□□□□ -0.99
SCARNA1-201ENST00000517138 PHACTR4Q8IZ21 702 aa8.89□□□□□ -0.99
SCARNA1-201ENST00000517138 ASB11Q8WXH4 323 aa8.89□□□□□ -0.99
SCARNA1-201ENST00000517138 UBOX5O94941 541 aa8.88□□□□□ -0.99
SCARNA1-201ENST00000517138 CYP7A1P22680 504 aa8.88□□□□□ -0.99
SCARNA1-201ENST00000517138 UBE2FQ969M7 185 aa8.88□□□□□ -0.99
SCARNA1-201ENST00000517138 CCDC74BQ96LY2 380 aa8.88□□□□□ -0.99
SCARNA1-201ENST00000517138 ZSWIM5Q9P217 1185 aa8.88□□□□□ -0.99
SCARNA1-201ENST00000517138 KIR3DL1P43629 444 aa8.87□□□□□ -0.99
SCARNA1-201ENST00000517138 TNNI2P48788 182 aa8.87□□□□□ -0.99
SCARNA1-201ENST00000517138 ANGEL2Q5VTE6 544 aaKnown RBP8.87□□□□□ -0.99
SCARNA1-201ENST00000517138 NT5DC4Q86YG4 428 aa8.87□□□□□ -0.99
SCARNA1-201ENST00000517138 DTWD2Q8NBA8 298 aa8.87□□□□□ -0.99
SCARNA1-201ENST00000517138 ATG4CQ96DT6 458 aa8.87□□□□□ -0.99
SCARNA1-201ENST00000517138 KREMEN1Q96MU8 473 aa8.87□□□□□ -0.99
SCARNA1-201ENST00000517138 GMIPQ9P107 970 aa8.87□□□□□ -0.99
SCARNA1-201ENST00000517138 ZP2Q05996 745 aa8.86□□□□□ -0.99
SCARNA1-201ENST00000517138 REXO1Q8N1G1 1221 aaKnown RBP8.86□□□□□ -0.99
SCARNA1-201ENST00000517138 LRRN4CLQ8ND94 238 aa8.86□□□□□ -0.99
SCARNA1-201ENST00000517138 PI4K2BQ8TCG2 481 aa8.86□□□□□ -0.99
SCARNA1-201ENST00000517138 VWCEQ96DN2 955 aa8.86□□□□□ -0.99
SCARNA1-201ENST00000517138 DUSP15Q9H1R2 295 aaPredicted RBP8.86□□□□□ -0.99
SCARNA1-201ENST00000517138 CARS2Q9HA77 564 aaKnown RBP8.86□□□□□ -0.99
SCARNA1-201ENST00000517138 RGS13O14921 159 aa8.85□□□□□ -0.99
SCARNA1-201ENST00000517138 RAG1P15918 1043 aa8.85□□□□□ -0.99
SCARNA1-201ENST00000517138 ZNF165P49910 485 aa8.85□□□□□ -0.99
SCARNA1-201ENST00000517138 PAK2Q13177 524 aa8.85□□□□□ -0.99
SCARNA1-201ENST00000517138 CNNM2Q9H8M5 875 aa8.85□□□□□ -0.99
SCARNA1-201ENST00000517138 GBP1P32455 592 aa8.84□□□□□ -0.99
SCARNA1-201ENST00000517138 CDCP2Q5VXM1 449 aa8.84□□□□□ -0.99
SCARNA1-201ENST00000517138 RNF141Q8WVD5 230 aa8.84□□□□□ -0.99
SCARNA1-201ENST00000517138 COX4I2Q96KJ9 171 aa8.84□□□□□ -0.99
SCARNA1-201ENST00000517138 KRTAP4-8Q9BYQ9 185 aa8.84□□□□□ -0.99
SCARNA1-201ENST00000517138 RC3H2Q9HBD1 1191 aaKnown RBP8.84□□□□□ -0.99
SCARNA1-201ENST00000517138 PPT2Q9UMR5 302 aa8.84□□□□□ -0.99
SCARNA1-201ENST00000517138 SHISA3A0PJX4 238 aa8.83□□□□□ -1
SCARNA1-201ENST00000517138 ESR1P03372 595 aa8.83□□□□□ -1
SCARNA1-201ENST00000517138 RAD51AP2Q09MP3 1159 aa8.83□□□□□ -1
SCARNA1-201ENST00000517138 MLECQ14165 292 aa8.83□□□□□ -1
SCARNA1-201ENST00000517138 NLRC3Q7RTR2 1065 aa8.83□□□□□ -1
SCARNA1-201ENST00000517138 ZNF654Q8IZM8 581 aa8.83□□□□□ -1
SCARNA1-201ENST00000517138 PIWIL2Q8TC59 973 aaKnown RBP8.83□□□□□ -1
SCARNA1-201ENST00000517138 TMEM40Q8WWA1 233 aa8.83□□□□□ -1
SCARNA1-201ENST00000517138 ZNF512BQ96KM6 892 aaPredicted RBP8.83□□□□□ -1
SCARNA1-201ENST00000517138 FAM86C2PA6NEL3 165 aa8.82□□□□□ -1
SCARNA1-201ENST00000517138 SRFP11831 508 aa8.82□□□□□ -1
SCARNA1-201ENST00000517138 NME1P15531 152 aaKnown RBP8.82□□□□□ -1
SCARNA1-201ENST00000517138 SLC23A3Q6PIS1 610 aa8.82□□□□□ -1
SCARNA1-201ENST00000517138 GINM1Q9NU53 330 aa8.82□□□□□ -1
SCARNA1-201ENST00000517138 ZNRF3Q9ULT6 936 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms