RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 SUZ12Q15022 739 aaKnown RBP4.45□□□□□ -1.7
SCARNA15.2-201ENST00000516409 SETDB1Q15047 1291 aa4.45□□□□□ -1.7
SCARNA15.2-201ENST00000516409 AXDND1Q5T1B0 1012 aaPredicted RBP4.45□□□□□ -1.7
SCARNA15.2-201ENST00000516409 ZBTB37Q5TC79 503 aa4.45□□□□□ -1.7
SCARNA15.2-201ENST00000516409 BAHD1Q8TBE0 780 aaPredicted RBP4.45□□□□□ -1.7
SCARNA15.2-201ENST00000516409 FGD4Q96M96 766 aa4.45□□□□□ -1.7
SCARNA15.2-201ENST00000516409 APBA2Q99767 749 aa4.45□□□□□ -1.7
SCARNA15.2-201ENST00000516409 HAUS7Q99871 368 aa4.45□□□□□ -1.7
SCARNA15.2-201ENST00000516409 RUSC1Q9BVN2 902 aa4.45□□□□□ -1.7
SCARNA15.2-201ENST00000516409 MBIPQ9NS73 344 aa4.45□□□□□ -1.7
SCARNA15.2-201ENST00000516409 RAD18Q9NS91 495 aa4.45□□□□□ -1.7
SCARNA15.2-201ENST00000516409 MCM8Q9UJA3 840 aa4.45□□□□□ -1.7
SCARNA15.2-201ENST00000516409 PPP1R9AQ9ULJ8 1098 aa4.45□□□□□ -1.7
SCARNA15.2-201ENST00000516409 NSFL1CQ9UNZ2 370 aaKnown RBP4.45□□□□□ -1.7
SCARNA15.2-201ENST00000516409 EID1Q9Y6B2 187 aa4.45□□□□□ -1.7
SCARNA15.2-201ENST00000516409 IGF1RP08069 1367 aa4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 CCDC194A0A1B0GVG4 234 aa4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 M0R082 166 aa4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 RGS13O14921 159 aa4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 TBX1O43435 398 aa4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 CBFA2T2O43439 604 aa4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 EIF4EBP3O60516 100 aaPredicted RBP4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 LILRB5O75023 590 aa4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 ITGAVP06756 1048 aa4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 SLFN14P0C7P3 912 aa4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 NAT2P11245 290 aa4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 GBP1P32455 592 aa4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 NTF4P34130 210 aa4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 GRIA2P42262 883 aa4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 ZNF143P52747 638 aaPredicted RBP4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 ERVK-24P63145 666 aa4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 ID3Q02535 119 aa4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 HSP90AA2PQ14568 343 aaPredicted RBP4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 NKG7Q16617 165 aa4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 FOXD4L6Q3SYB3 417 aaPredicted RBP4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 BBS9Q3SYG4 887 aa4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 FNDC3BQ53EP0 1204 aaKnown RBP4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 DCAF15Q66K64 600 aa4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 MSL1Q68DK7 614 aa4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 HEATR6Q6AI08 1181 aaKnown RBP4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 FOXD4L3Q6VB84 417 aaPredicted RBP4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 SLCO4C1Q6ZQN7 724 aa4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 UBE3DQ7Z6J8 389 aa4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 STRA8Q7Z7C7 330 aa4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 ZNF227Q86WZ6 799 aa4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 MCATQ8IVS2 390 aaKnown RBP4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 SLFN12Q8IYM2 578 aa4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 AFAP1L2Q8N4X5 818 aa4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 GPR161Q8N6U8 529 aaKnown RBP4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 KLHL23Q8NBE8 558 aa4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 LRRN4CLQ8ND94 238 aa4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 ATL2Q8NHH9 583 aa4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 ZNF417Q8TAU3 575 aa4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 UBASH3BQ8TF42 649 aa4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 IPO9Q96P70 1041 aaKnown RBP4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 ZNF587Q96SQ5 575 aaPredicted RBP4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 KCNK4Q9NYG8 393 aa4.44□□□□□ -1.7
SCARNA15.2-201ENST00000516409 FANCGO15287 622 aa4.43□□□□□ -1.7
SCARNA15.2-201ENST00000516409 PRODHO43272 600 aa4.43□□□□□ -1.7
SCARNA15.2-201ENST00000516409 CLEC3AO75596 197 aa4.43□□□□□ -1.7
SCARNA15.2-201ENST00000516409 DNAJC8O75937 253 aaPredicted RBP4.43□□□□□ -1.7
SCARNA15.2-201ENST00000516409 EPXP11678 715 aa4.43□□□□□ -1.7
SCARNA15.2-201ENST00000516409 AKAP4Q5JQC9 854 aa4.43□□□□□ -1.7
SCARNA15.2-201ENST00000516409 HP1BP3Q5SSJ5 553 aaPredicted RBP4.43□□□□□ -1.7
SCARNA15.2-201ENST00000516409 SLC6A19Q695T7 634 aa4.43□□□□□ -1.7
SCARNA15.2-201ENST00000516409 C1orf229Q6ZS94 237 aaPredicted RBP4.43□□□□□ -1.7
SCARNA15.2-201ENST00000516409 LRRTM3Q86VH5 581 aa4.43□□□□□ -1.7
SCARNA15.2-201ENST00000516409 HID1Q8IV36 788 aa4.43□□□□□ -1.7
SCARNA15.2-201ENST00000516409 MRPL41Q8IXM3 137 aaKnown RBP4.43□□□□□ -1.7
SCARNA15.2-201ENST00000516409 DMRTC2Q8IXT2 367 aaPredicted RBP4.43□□□□□ -1.7
SCARNA15.2-201ENST00000516409 CCDC144CPQ8IYA2 1237 aa4.43□□□□□ -1.7
SCARNA15.2-201ENST00000516409 GOLGA6L1Q8N7Z2 621 aa4.43□□□□□ -1.7
SCARNA15.2-201ENST00000516409 ZNF513Q8N8E2 541 aaPredicted RBP4.43□□□□□ -1.7
SCARNA15.2-201ENST00000516409 XAGE3Q8WTP9 111 aa4.43□□□□□ -1.7
SCARNA15.2-201ENST00000516409 TSR2Q969E8 191 aaKnown RBP4.43□□□□□ -1.7
SCARNA15.2-201ENST00000516409 DHRS1Q96LJ7 313 aa4.43□□□□□ -1.7
SCARNA15.2-201ENST00000516409 CCDC74BQ96LY2 380 aa4.43□□□□□ -1.7
SCARNA15.2-201ENST00000516409 MRPL4Q9BYD3 311 aaKnown RBP4.43□□□□□ -1.7
SCARNA15.2-201ENST00000516409 KLHL25Q9H0H3 589 aa4.43□□□□□ -1.7
SCARNA15.2-201ENST00000516409 TCEAL9Q9UHQ7 104 aa4.43□□□□□ -1.7
SCARNA15.2-201ENST00000516409 AP4E1Q9UPM8 1137 aa4.43□□□□□ -1.7
SCARNA15.2-201ENST00000516409 MAPRE3Q9UPY8 281 aa4.43□□□□□ -1.7
SCARNA15.2-201ENST00000516409 WASHC2CQ9Y4E1 1318 aa4.43□□□□□ -1.7
SCARNA15.2-201ENST00000516409 FAM83GA6ND36 823 aa4.42□□□□□ -1.7
SCARNA15.2-201ENST00000516409 ALG1L2C9J202 215 aa4.42□□□□□ -1.7
SCARNA15.2-201ENST00000516409 C11orf95C9JLR9 678 aaPredicted RBP4.42□□□□□ -1.7
SCARNA15.2-201ENST00000516409 DLL1O00548 723 aa4.42□□□□□ -1.7
SCARNA15.2-201ENST00000516409 PEX14O75381 377 aa4.42□□□□□ -1.7
SCARNA15.2-201ENST00000516409 KATNA1O75449 491 aa4.42□□□□□ -1.7
SCARNA15.2-201ENST00000516409 ALDH1L1O75891 902 aa4.42□□□□□ -1.7
SCARNA15.2-201ENST00000516409 NEFMP07197 916 aa4.42□□□□□ -1.7
SCARNA15.2-201ENST00000516409 PABPC1P11940 636 aaKnown RBP4.42□□□□□ -1.7
SCARNA15.2-201ENST00000516409 CD68P34810 354 aaPredicted RBP4.42□□□□□ -1.7
SCARNA15.2-201ENST00000516409 GUCY2FP51841 1108 aa4.42□□□□□ -1.7
SCARNA15.2-201ENST00000516409 TBX4P57082 545 aa4.42□□□□□ -1.7
SCARNA15.2-201ENST00000516409 SUMO1P63165 101 aaKnown RBP4.42□□□□□ -1.7
SCARNA15.2-201ENST00000516409 TTLL4Q14679 1199 aa4.42□□□□□ -1.7
SCARNA15.2-201ENST00000516409 PRAMEF13Q5VWM6 474 aa4.42□□□□□ -1.7
SCARNA15.2-201ENST00000516409 WWC2Q6AWC2 1192 aa4.42□□□□□ -1.7
SCARNA15.2-201ENST00000516409 NSMFQ6X4W1 530 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms