RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 PRXQ9BXM0 1461 aa12.23□□□□□ -0.45
TRIM41-209ENST00000515834 AKR1B15C9JRZ8 316 aaPredicted RBP12.23□□□□□ -0.45
TRIM41-209ENST00000515834 WDR46O15213 610 aaKnown RBP12.23□□□□□ -0.45
TRIM41-209ENST00000515834 HPDP32754 393 aaPredicted RBP12.23□□□□□ -0.45
TRIM41-209ENST00000515834 CYP2J2P51589 502 aa12.23□□□□□ -0.45
TRIM41-209ENST00000515834 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.23□□□□□ -0.45
TRIM41-209ENST00000515834 TMEM87BQ96K49 555 aa12.23□□□□□ -0.45
TRIM41-209ENST00000515834 LIG4P49917 911 aa12.22□□□□□ -0.45
TRIM41-209ENST00000515834 HDAC1Q13547 482 aaPredicted RBP12.22□□□□□ -0.45
TRIM41-209ENST00000515834 CLRN2A0PK11 232 aa12.22□□□□□ -0.45
TRIM41-209ENST00000515834 ARID4AP29374 1257 aaPredicted RBP12.22□□□□□ -0.45
TRIM41-209ENST00000515834 ARPP19P56211 112 aa12.22□□□□□ -0.45
TRIM41-209ENST00000515834 CEP85LQ5SZL2 805 aa12.22□□□□□ -0.45
TRIM41-209ENST00000515834 TRIM50Q86XT4 487 aa12.22□□□□□ -0.45
TRIM41-209ENST00000515834 ATF5Q9Y2D1 282 aaPredicted RBP12.22□□□□□ -0.45
TRIM41-209ENST00000515834 ZNF532Q9HCE3 1301 aa12.22□□□□□ -0.45
TRIM41-209ENST00000515834 TBC1D22AQ8WUA7 517 aa12.22□□□□□ -0.45
TRIM41-209ENST00000515834 VPS18Q9P253 973 aa12.22□□□□□ -0.45
TRIM41-209ENST00000515834 THRAP3Q9Y2W1 955 aaKnown RBP12.22□□□□□ -0.45
TRIM41-209ENST00000515834 LONRF3Q496Y0 759 aa12.22□□□□□ -0.45
TRIM41-209ENST00000515834 CERS3Q8IU89 383 aa12.22□□□□□ -0.45
TRIM41-209ENST00000515834 LRRC47Q8N1G4 583 aaKnown RBP12.22□□□□□ -0.45
TRIM41-209ENST00000515834 XPAP23025 273 aaPredicted RBP12.22□□□□□ -0.45
TRIM41-209ENST00000515834 GKAP1Q5VSY0 366 aaPredicted RBP12.22□□□□□ -0.45
TRIM41-209ENST00000515834 LGR6Q9HBX8 967 aa12.22□□□□□ -0.45
TRIM41-209ENST00000515834 RALGAPBQ86X10 1494 aa12.22□□□□□ -0.45
TRIM41-209ENST00000515834 XKR9Q5GH70 373 aa12.21□□□□□ -0.45
TRIM41-209ENST00000515834 KRT25Q7Z3Z0 450 aa12.21□□□□□ -0.45
TRIM41-209ENST00000515834 SLC52A2Q9HAB3 445 aa12.21□□□□□ -0.45
TRIM41-209ENST00000515834 TRPM2O94759 1503 aa12.21□□□□□ -0.45
TRIM41-209ENST00000515834 BCRP11274 1271 aa12.21□□□□□ -0.45
TRIM41-209ENST00000515834 SYT10Q6XYQ8 523 aa12.21□□□□□ -0.45
TRIM41-209ENST00000515834 CABP7Q86V35 215 aa12.21□□□□□ -0.45
TRIM41-209ENST00000515834 APPBP2Q92624 585 aa12.21□□□□□ -0.45
TRIM41-209ENST00000515834 TBC1D32Q96NH3 1257 aa12.21□□□□□ -0.45
TRIM41-209ENST00000515834 SLAIN2Q9P270 581 aa12.21□□□□□ -0.45
TRIM41-209ENST00000515834 PCDHB15Q9Y5E8 787 aa12.21□□□□□ -0.45
TRIM41-209ENST00000515834 A2MP01023 1474 aa12.21□□□□□ -0.45
TRIM41-209ENST00000515834 TNNC2P02585 160 aa12.21□□□□□ -0.45
TRIM41-209ENST00000515834 RNASELQ05823 741 aaKnown RBP12.21□□□□□ -0.45
TRIM41-209ENST00000515834 FYB2Q5VWT5 728 aa12.21□□□□□ -0.45
TRIM41-209ENST00000515834 STMN2Q93045 179 aa12.21□□□□□ -0.45
TRIM41-209ENST00000515834 AP5M1Q9H0R1 490 aa12.21□□□□□ -0.45
TRIM41-209ENST00000515834 MAP3K19Q56UN5 1328 aa12.21□□□□□ -0.45
TRIM41-209ENST00000515834 ATP5DP30049 168 aa12.21□□□□□ -0.45
TRIM41-209ENST00000515834 ZAP70P43403 619 aa12.21□□□□□ -0.45
TRIM41-209ENST00000515834 G2E3Q7L622 706 aa12.21□□□□□ -0.45
TRIM41-209ENST00000515834 CNGA4Q8IV77 575 aa12.21□□□□□ -0.45
TRIM41-209ENST00000515834 RXRBP28702 533 aa12.21□□□□□ -0.46
TRIM41-209ENST00000515834 KLHL40Q2TBA0 621 aa12.21□□□□□ -0.46
TRIM41-209ENST00000515834 CERKLQ49MI3 558 aaPredicted RBP12.21□□□□□ -0.46
TRIM41-209ENST00000515834 PRR16Q569H4 304 aa12.21□□□□□ -0.46
TRIM41-209ENST00000515834 KCNJ14Q9UNX9 436 aa12.21□□□□□ -0.46
TRIM41-209ENST00000515834 PCDHB13Q9Y5F0 798 aa12.21□□□□□ -0.46
TRIM41-209ENST00000515834 MROH5Q6ZUA9 1318 aa12.21□□□□□ -0.46
TRIM41-209ENST00000515834 ATF7P17544 494 aaPredicted RBP12.21□□□□□ -0.46
TRIM41-209ENST00000515834 IGSF22Q8N9C0 903 aa12.21□□□□□ -0.46
TRIM41-209ENST00000515834 PHACTR3Q96KR7 559 aa12.21□□□□□ -0.46
TRIM41-209ENST00000515834 ANGEL1Q9UNK9 670 aaKnown RBP12.21□□□□□ -0.46
TRIM41-209ENST00000515834 TNNQ9UQP3 1299 aa12.21□□□□□ -0.46
TRIM41-209ENST00000515834 CEP57Q86XR8 500 aa12.2□□□□□ -0.46
TRIM41-209ENST00000515834 MICAL1Q8TDZ2 1067 aa12.2□□□□□ -0.46
TRIM41-209ENST00000515834 RPS6KB1P23443 525 aa12.2□□□□□ -0.46
TRIM41-209ENST00000515834 YWHAEP62258 255 aaKnown RBP12.2□□□□□ -0.46
TRIM41-209ENST00000515834 SF3A3Q12874 501 aaKnown RBP eCLIP12.2□□□□□ -0.46
TRIM41-209ENST00000515834 MUM1L1Q5H9M0 696 aa12.2□□□□□ -0.46
TRIM41-209ENST00000515834 AKT3Q9Y243 479 aa12.2□□□□□ -0.46
TRIM41-209ENST00000515834 SOS1Q07889 1333 aaPredicted RBP12.2□□□□□ -0.46
TRIM41-209ENST00000515834 FLAD1Q8NFF5 587 aa12.2□□□□□ -0.46
TRIM41-209ENST00000515834 SYNRGQ9UMZ2 1314 aa12.2□□□□□ -0.46
TRIM41-209ENST00000515834 SPDYE2BA6NHP3 402 aa12.2□□□□□ -0.46
TRIM41-209ENST00000515834 SPDYE6P0CI01 402 aa12.2□□□□□ -0.46
TRIM41-209ENST00000515834 PPP1R2P41236 205 aa12.2□□□□□ -0.46
TRIM41-209ENST00000515834 TTC30BQ8N4P2 665 aa12.2□□□□□ -0.46
TRIM41-209ENST00000515834 PSMB7Q99436 277 aa12.2□□□□□ -0.46
TRIM41-209ENST00000515834 BAG1Q99933 345 aaPredicted RBP12.2□□□□□ -0.46
TRIM41-209ENST00000515834 BLZF1Q9H2G9 400 aa12.2□□□□□ -0.46
TRIM41-209ENST00000515834 ZMYM3Q14202 1370 aa12.2□□□□□ -0.46
TRIM41-209ENST00000515834 SMCO2A6NFE2 343 aa12.2□□□□□ -0.46
TRIM41-209ENST00000515834 TBC1D8O95759 1140 aa12.2□□□□□ -0.46
TRIM41-209ENST00000515834 SAT1P21673 171 aa12.2□□□□□ -0.46
TRIM41-209ENST00000515834 OSBPP22059 807 aa12.2□□□□□ -0.46
TRIM41-209ENST00000515834 RPS8P62241 208 aaKnown RBP12.2□□□□□ -0.46
TRIM41-209ENST00000515834 PAK1Q13153 545 aa12.2□□□□□ -0.46
TRIM41-209ENST00000515834 KIAA1841Q6NSI8 718 aa12.2□□□□□ -0.46
TRIM41-209ENST00000515834 STAMQ92783 540 aa12.2□□□□□ -0.46
TRIM41-209ENST00000515834 POLR2MP0CAP2 368 aa12.19□□□□□ -0.46
TRIM41-209ENST00000515834 TMOD1P28289 359 aa12.19□□□□□ -0.46
TRIM41-209ENST00000515834 ZNF131P52739 623 aa12.19□□□□□ -0.46
TRIM41-209ENST00000515834 POLGP54098 1239 aaPredicted RBP12.19□□□□□ -0.46
TRIM41-209ENST00000515834 KCNH3Q9ULD8 1083 aa12.19□□□□□ -0.46
TRIM41-209ENST00000515834 SLC27A2O14975 620 aa12.19□□□□□ -0.46
TRIM41-209ENST00000515834 CEP128Q6ZU80 1094 aa12.19□□□□□ -0.46
TRIM41-209ENST00000515834 VPS54Q9P1Q0 977 aa12.19□□□□□ -0.46
TRIM41-209ENST00000515834 LRRIQ4A6NIV6 560 aa12.19□□□□□ -0.46
TRIM41-209ENST00000515834 ACTN4O43707 911 aaKnown RBP12.19□□□□□ -0.46
TRIM41-209ENST00000515834 DIS3L2Q8IYB7 885 aaKnown RBP12.19□□□□□ -0.46
TRIM41-209ENST00000515834 RSAD2Q8WXG1 361 aa12.19□□□□□ -0.46
TRIM41-209ENST00000515834 ASXL1Q8IXJ9 1541 aa12.19□□□□□ -0.46
TRIM41-209ENST00000515834 CUL7Q14999 1698 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms