RNA–Protein interactions for RNA: ENST00000515588.1

SERF1B-208, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 2 BASIC

Gene SERF1B, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-208ENST00000515588 TRIM47Q96LD4 638 aa18.86■□□□□ 0.61
SERF1B-208ENST00000515588 KIAA1683Q9H0B3 1180 aa18.86■□□□□ 0.61
SERF1B-208ENST00000515588 A0A1W2PRG0 241 aa18.85■□□□□ 0.61
SERF1B-208ENST00000515588 MINDY4BA8MYZ0 360 aa18.85■□□□□ 0.61
SERF1B-208ENST00000515588 APPP05067 770 aa18.85■□□□□ 0.61
SERF1B-208ENST00000515588 OSBPP22059 807 aa18.85■□□□□ 0.61
SERF1B-208ENST00000515588 PSMC4P43686 418 aa18.85■□□□□ 0.61
SERF1B-208ENST00000515588 PABPC4Q13310 644 aaKnown RBP eCLIP18.85■□□□□ 0.61
SERF1B-208ENST00000515588 KIF22Q14807 665 aa18.85■□□□□ 0.61
SERF1B-208ENST00000515588 ZYXQ15942 572 aaKnown RBP18.85■□□□□ 0.61
SERF1B-208ENST00000515588 TMEM179Q6ZVK1 233 aa18.85■□□□□ 0.61
SERF1B-208ENST00000515588 CLEC10AQ8IUN9 316 aa18.85■□□□□ 0.61
SERF1B-208ENST00000515588 IFNL3Q8IZI9 196 aa18.85■□□□□ 0.61
SERF1B-208ENST00000515588 C12orf42Q96LP6 360 aa18.85■□□□□ 0.61
SERF1B-208ENST00000515588 FAM227BQ96M60 508 aa18.85■□□□□ 0.61
SERF1B-208ENST00000515588 FEZ1Q99689 392 aa18.85■□□□□ 0.61
SERF1B-208ENST00000515588 PNMA3Q9UL41 463 aa18.85■□□□□ 0.61
SERF1B-208ENST00000515588 A0A0D9SFI3 127 aa18.84■□□□□ 0.61
SERF1B-208ENST00000515588 TRIM6-TRIM34B2RNG4 842 aa18.84■□□□□ 0.61
SERF1B-208ENST00000515588 TDO2P48775 406 aa18.84■□□□□ 0.61
SERF1B-208ENST00000515588 ARHGEF6Q15052 776 aa18.84■□□□□ 0.61
SERF1B-208ENST00000515588 STK11IPQ8N1F8 1099 aa18.84■□□□□ 0.61
SERF1B-208ENST00000515588 ANKRD13CQ8N6S4 541 aa18.84■□□□□ 0.61
SERF1B-208ENST00000515588 CCDC17Q96LX7 622 aa18.84■□□□□ 0.61
SERF1B-208ENST00000515588 P2RX7Q99572 595 aaKnown RBP18.84■□□□□ 0.61
SERF1B-208ENST00000515588 ROBO3Q96MS0 1386 aa18.83■□□□□ 0.61
SERF1B-208ENST00000515588 VPS53Q5VIR6 699 aa18.83■□□□□ 0.6
SERF1B-208ENST00000515588 POTEEQ6S8J3 1075 aa18.83■□□□□ 0.6
SERF1B-208ENST00000515588 RILPL2Q969X0 211 aa18.83■□□□□ 0.6
SERF1B-208ENST00000515588 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.83■□□□□ 0.6
SERF1B-208ENST00000515588 HELLSQ9NRZ9 838 aa18.83■□□□□ 0.6
SERF1B-208ENST00000515588 PTCH2Q9Y6C5 1203 aa18.83■□□□□ 0.6
SERF1B-208ENST00000515588 FMNL1O95466 1100 aaPredicted RBP18.82■□□□□ 0.6
SERF1B-208ENST00000515588 GNRH1P01148 92 aa18.82■□□□□ 0.6
SERF1B-208ENST00000515588 VCAM1P19320 739 aa18.82■□□□□ 0.6
SERF1B-208ENST00000515588 RASA1P20936 1047 aa18.82■□□□□ 0.6
SERF1B-208ENST00000515588 GCLCP48506 637 aaPredicted RBP18.82■□□□□ 0.6
SERF1B-208ENST00000515588 USP14P54578 494 aa18.82■□□□□ 0.6
SERF1B-208ENST00000515588 IRX3P78415 501 aaPredicted RBP18.82■□□□□ 0.6
SERF1B-208ENST00000515588 NMIQ13287 307 aaPredicted RBP18.82■□□□□ 0.6
SERF1B-208ENST00000515588 FAM110CQ1W6H9 321 aa18.82■□□□□ 0.6
SERF1B-208ENST00000515588 KIAA1755Q5JYT7 1200 aa18.82■□□□□ 0.6
SERF1B-208ENST00000515588 TICAM2Q86XR7 235 aa18.82■□□□□ 0.6
SERF1B-208ENST00000515588 BRCA2P51587 3418 aa18.81■□□□□ 0.6
SERF1B-208ENST00000515588 PEX10O60683 326 aa18.81■□□□□ 0.6
SERF1B-208ENST00000515588 HERVK_113P62684 666 aa18.81■□□□□ 0.6
SERF1B-208ENST00000515588 ICA1Q05084 483 aa18.81■□□□□ 0.6
SERF1B-208ENST00000515588 ZNF589Q86UQ0 364 aaPredicted RBP18.81■□□□□ 0.6
SERF1B-208ENST00000515588 NACAP1Q9BZK3 213 aa18.81■□□□□ 0.6
SERF1B-208ENST00000515588 SRRDQ9UH36 339 aa18.81■□□□□ 0.6
SERF1B-208ENST00000515588 MYH8P13535 1937 aa18.8■□□□□ 0.6
SERF1B-208ENST00000515588 SDSP20132 328 aa18.8■□□□□ 0.6
SERF1B-208ENST00000515588 FCGRTP55899 365 aa18.8■□□□□ 0.6
SERF1B-208ENST00000515588 SOX10P56693 466 aa18.8■□□□□ 0.6
SERF1B-208ENST00000515588 MCMDC2Q4G0Z9 681 aa18.8■□□□□ 0.6
SERF1B-208ENST00000515588 NAPBQ9H115 298 aa18.8■□□□□ 0.6
SERF1B-208ENST00000515588 TXNRD2Q9NNW7 524 aa18.8■□□□□ 0.6
SERF1B-208ENST00000515588 USP17L15C9J2P7 530 aa18.79■□□□□ 0.6
SERF1B-208ENST00000515588 USP17L13C9JLJ4 530 aa18.79■□□□□ 0.6
SERF1B-208ENST00000515588 USP17L11C9JVI0 530 aa18.79■□□□□ 0.6
SERF1B-208ENST00000515588 USP17L18D6R9N7 530 aa18.79■□□□□ 0.6
SERF1B-208ENST00000515588 USP17L22D6RA61 530 aa18.79■□□□□ 0.6
SERF1B-208ENST00000515588 USP17L17D6RBQ6 530 aa18.79■□□□□ 0.6
SERF1B-208ENST00000515588 USP17L19D6RCP7 530 aa18.79■□□□□ 0.6
SERF1B-208ENST00000515588 USP17L20D6RJB6 530 aa18.79■□□□□ 0.6
SERF1B-208ENST00000515588 PRDM1O75626 825 aa18.79■□□□□ 0.6
SERF1B-208ENST00000515588 PRKCZQ05513 592 aa18.79■□□□□ 0.6
SERF1B-208ENST00000515588 PPARAQ07869 468 aa18.79■□□□□ 0.6
SERF1B-208ENST00000515588 USP17L24Q0WX57 530 aa18.79■□□□□ 0.6
SERF1B-208ENST00000515588 CATSPERGQ6ZRH7 1159 aa18.79■□□□□ 0.6
SERF1B-208ENST00000515588 ARMC5Q96C12 935 aa18.79■□□□□ 0.6
SERF1B-208ENST00000515588 MKNK2Q9HBH9 465 aa18.79■□□□□ 0.6
SERF1B-208ENST00000515588 RBPJLQ9UBG7 517 aa18.79■□□□□ 0.6
SERF1B-208ENST00000515588 MORF4L1Q9UBU8 362 aa18.79■□□□□ 0.6
SERF1B-208ENST00000515588 TMX2Q9Y320 296 aa18.79■□□□□ 0.6
SERF1B-208ENST00000515588 MYPNQ86TC9 1320 aa18.78■□□□□ 0.6
SERF1B-208ENST00000515588 EEF2P13639 858 aaKnown RBP18.78■□□□□ 0.6
SERF1B-208ENST00000515588 HOXD10P28358 340 aa18.78■□□□□ 0.6
SERF1B-208ENST00000515588 RGS19P49795 217 aa18.78■□□□□ 0.6
SERF1B-208ENST00000515588 PRMT2P55345 433 aa18.78■□□□□ 0.6
SERF1B-208ENST00000515588 RPAP3Q9H6T3 665 aaPredicted RBP18.78■□□□□ 0.6
SERF1B-208ENST00000515588 KANSL2Q9H9L4 492 aa18.78■□□□□ 0.6
SERF1B-208ENST00000515588 GABRQQ9UN88 632 aa18.78■□□□□ 0.6
SERF1B-208ENST00000515588 GSPT1P15170 499 aaKnown RBP18.77■□□□□ 0.6
SERF1B-208ENST00000515588 ALX1Q15699 326 aa18.77■□□□□ 0.6
SERF1B-208ENST00000515588 Q3C1V9 767 aa18.77■□□□□ 0.6
SERF1B-208ENST00000515588 ARHGEF10LQ9HCE6 1279 aa18.77■□□□□ 0.6
SERF1B-208ENST00000515588 INCENPQ9NQS7 918 aa18.77■□□□□ 0.6
SERF1B-208ENST00000515588 TACC3Q9Y6A5 838 aa18.77■□□□□ 0.6
SERF1B-208ENST00000515588 MGAMO43451 1857 aa18.77■□□□□ 0.6
SERF1B-208ENST00000515588 GREB1LQ9C091 1923 aaPredicted RBP18.76■□□□□ 0.59
SERF1B-208ENST00000515588 IGKV6D-41A0A0C4DH26 115 aa18.76■□□□□ 0.59
SERF1B-208ENST00000515588 TNPO2O14787 897 aaKnown RBP18.76■□□□□ 0.59
SERF1B-208ENST00000515588 CNMDO75829 334 aa18.76■□□□□ 0.59
SERF1B-208ENST00000515588 ATP2B2Q01814 1243 aa18.76■□□□□ 0.59
SERF1B-208ENST00000515588 SLC9C1Q4G0N8 1177 aa18.76■□□□□ 0.59
SERF1B-208ENST00000515588 TTC22Q5TAA0 569 aa18.76■□□□□ 0.59
SERF1B-208ENST00000515588 SPICE1Q8N0Z3 855 aa18.76■□□□□ 0.59
SERF1B-208ENST00000515588 SH3TC2Q8TF17 1288 aa18.76■□□□□ 0.59
SERF1B-208ENST00000515588 ZNF333Q96JL9 665 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms