RNA–Protein interactions for RNA: ENST00000515391.5

CDK7-213, Transcript of cyclin dependent kinase 7, humanhuman

TSL 2

Gene CDK7, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-213ENST00000515391 USP17L2Q6R6M4 530 aa15.7■□□□□ 0.1
CDK7-213ENST00000515391 CLEC10AQ8IUN9 316 aa15.7■□□□□ 0.1
CDK7-213ENST00000515391 STK11IPQ8N1F8 1099 aa15.7■□□□□ 0.1
CDK7-213ENST00000515391 ARMC5Q96C12 935 aa15.7■□□□□ 0.1
CDK7-213ENST00000515391 FSD1Q9BTV5 496 aa15.7■□□□□ 0.1
CDK7-213ENST00000515391 LNPKQ9C0E8 428 aa15.7■□□□□ 0.1
CDK7-213ENST00000515391 MYPNQ86TC9 1320 aa15.69■□□□□ 0.1
CDK7-213ENST00000515391 GPAA1O43292 621 aa15.69■□□□□ 0.1
CDK7-213ENST00000515391 GNRH1P01148 92 aa15.69■□□□□ 0.1
CDK7-213ENST00000515391 HOXD10P28358 340 aa15.69■□□□□ 0.1
CDK7-213ENST00000515391 CDK8P49336 464 aa15.69■□□□□ 0.1
CDK7-213ENST00000515391 PDE1AP54750 535 aa15.69■□□□□ 0.1
CDK7-213ENST00000515391 IRX3P78415 501 aaPredicted RBP15.69■□□□□ 0.1
CDK7-213ENST00000515391 PRKCZQ05513 592 aa15.69■□□□□ 0.1
CDK7-213ENST00000515391 SMC5Q8IY18 1101 aa15.69■□□□□ 0.1
CDK7-213ENST00000515391 DDRGK1Q96HY6 314 aa15.69■□□□□ 0.1
CDK7-213ENST00000515391 RWDD1Q9H446 243 aaPredicted RBP15.69■□□□□ 0.1
CDK7-213ENST00000515391 A0A1W2PRG0 241 aa15.68■□□□□ 0.1
CDK7-213ENST00000515391 ZFYP08048 801 aaPredicted RBP15.68■□□□□ 0.1
CDK7-213ENST00000515391 HOXA7P31268 230 aaPredicted RBP15.68■□□□□ 0.1
CDK7-213ENST00000515391 AAMPQ13685 434 aa15.68■□□□□ 0.1
CDK7-213ENST00000515391 FAM110CQ1W6H9 321 aa15.68■□□□□ 0.1
CDK7-213ENST00000515391 SAMD1Q6SPF0 538 aaPredicted RBP15.68■□□□□ 0.1
CDK7-213ENST00000515391 AMOTL1Q8IY63 956 aa15.68■□□□□ 0.1
CDK7-213ENST00000515391 ZNF333Q96JL9 665 aa15.68■□□□□ 0.1
CDK7-213ENST00000515391 EPB41L4AQ9HCS5 686 aaPredicted RBP15.68■□□□□ 0.1
CDK7-213ENST00000515391 STAP2Q9UGK3 403 aa15.68■□□□□ 0.1
CDK7-213ENST00000515391 SWAP70Q9UH65 585 aa15.68■□□□□ 0.1
CDK7-213ENST00000515391 MYH8P13535 1937 aa15.68■□□□□ 0.1
CDK7-213ENST00000515391 MINDY4BA8MYZ0 360 aa15.67■□□□□ 0.1
CDK7-213ENST00000515391 TNPO2O14787 897 aaKnown RBP15.67■□□□□ 0.1
CDK7-213ENST00000515391 GCLCP48506 637 aaPredicted RBP15.67■□□□□ 0.1
CDK7-213ENST00000515391 PRMT2P55345 433 aa15.67■□□□□ 0.1
CDK7-213ENST00000515391 HERVK_113P62684 666 aa15.67■□□□□ 0.1
CDK7-213ENST00000515391 POTEEQ6S8J3 1075 aa15.67■□□□□ 0.1
CDK7-213ENST00000515391 C16orf86Q6ZW13 317 aa15.67■□□□□ 0.1
CDK7-213ENST00000515391 RAET1EQ8TD07 263 aa15.67■□□□□ 0.1
CDK7-213ENST00000515391 KIAA1683Q9H0B3 1180 aa15.67■□□□□ 0.1
CDK7-213ENST00000515391 TXNRD2Q9NNW7 524 aa15.67■□□□□ 0.1
CDK7-213ENST00000515391 U3KPZ7 1027 aaPredicted RBP15.67■□□□□ 0.1
CDK7-213ENST00000515391 DOCK3Q8IZD9 2030 aa15.67■□□□□ 0.1
CDK7-213ENST00000515391 APPP05067 770 aa15.66■□□□□ 0.1
CDK7-213ENST00000515391 VCAM1P19320 739 aa15.66■□□□□ 0.1
CDK7-213ENST00000515391 FLT3LGP49771 235 aa15.66■□□□□ 0.1
CDK7-213ENST00000515391 KIAA1755Q5JYT7 1200 aa15.66■□□□□ 0.1
CDK7-213ENST00000515391 ZMYM1Q5SVZ6 1142 aa15.66■□□□□ 0.1
CDK7-213ENST00000515391 CCDC129Q6ZRS4 1044 aa15.66■□□□□ 0.1
CDK7-213ENST00000515391 NBPF11Q86T75 865 aa15.66■□□□□ 0.1
CDK7-213ENST00000515391 SIAH1Q8IUQ4 282 aa15.66■□□□□ 0.1
CDK7-213ENST00000515391 C12orf42Q96LP6 360 aa15.66■□□□□ 0.1
CDK7-213ENST00000515391 RBPJLQ9UBG7 517 aa15.66■□□□□ 0.1
CDK7-213ENST00000515391 ARPP21Q9UBL0 812 aaPredicted RBP15.66■□□□□ 0.1
CDK7-213ENST00000515391 EN2P19622 333 aaPredicted RBP15.65■□□□□ 0.1
CDK7-213ENST00000515391 GRK4P32298 578 aa15.65■□□□□ 0.1
CDK7-213ENST00000515391 USP14P54578 494 aa15.65■□□□□ 0.1
CDK7-213ENST00000515391 MTFR1Q15390 333 aa15.65■□□□□ 0.1
CDK7-213ENST00000515391 LRRFIP1Q32MZ4 808 aaKnown RBP15.65■□□□□ 0.1
CDK7-213ENST00000515391 Q3C1V9 767 aa15.65■□□□□ 0.1
CDK7-213ENST00000515391 SBK1Q52WX2 424 aa15.65■□□□□ 0.1
CDK7-213ENST00000515391 TMEM179Q6ZVK1 233 aa15.65■□□□□ 0.1
CDK7-213ENST00000515391 CHD1LQ86WJ1 897 aa15.65■□□□□ 0.1
CDK7-213ENST00000515391 PAGR1Q9BTK6 254 aa15.65■□□□□ 0.1
CDK7-213ENST00000515391 MORF4L1Q9UBU8 362 aa15.65■□□□□ 0.1
CDK7-213ENST00000515391 TAOK2Q9UL54 1235 aa15.65■□□□□ 0.1
CDK7-213ENST00000515391 USP17L15C9J2P7 530 aa15.64■□□□□ 0.09
CDK7-213ENST00000515391 PATL2C9JE40 543 aaKnown RBP15.64■□□□□ 0.09
CDK7-213ENST00000515391 USP17L13C9JLJ4 530 aa15.64■□□□□ 0.09
CDK7-213ENST00000515391 USP17L11C9JVI0 530 aa15.64■□□□□ 0.09
CDK7-213ENST00000515391 USP17L18D6R9N7 530 aa15.64■□□□□ 0.09
CDK7-213ENST00000515391 USP17L22D6RA61 530 aa15.64■□□□□ 0.09
CDK7-213ENST00000515391 USP17L17D6RBQ6 530 aa15.64■□□□□ 0.09
CDK7-213ENST00000515391 USP17L19D6RCP7 530 aa15.64■□□□□ 0.09
CDK7-213ENST00000515391 USP17L20D6RJB6 530 aa15.64■□□□□ 0.09
CDK7-213ENST00000515391 ELNP15502 786 aa15.64■□□□□ 0.09
CDK7-213ENST00000515391 TDO2P48775 406 aa15.64■□□□□ 0.09
CDK7-213ENST00000515391 ATP2B2Q01814 1243 aa15.64■□□□□ 0.09
CDK7-213ENST00000515391 USP17L24Q0WX57 530 aa15.64■□□□□ 0.09
CDK7-213ENST00000515391 CATSPERGQ6ZRH7 1159 aa15.64■□□□□ 0.09
CDK7-213ENST00000515391 IFNL3Q8IZI9 196 aa15.64■□□□□ 0.09
CDK7-213ENST00000515391 COA7Q96BR5 231 aa15.64■□□□□ 0.09
CDK7-213ENST00000515391 EVI5LQ96CN4 794 aa15.64■□□□□ 0.09
CDK7-213ENST00000515391 CCDC17Q96LX7 622 aa15.64■□□□□ 0.09
CDK7-213ENST00000515391 TMEM106CQ9BVX2 250 aa15.64■□□□□ 0.09
CDK7-213ENST00000515391 RPAP3Q9H6T3 665 aaPredicted RBP15.64■□□□□ 0.09
CDK7-213ENST00000515391 GNAT2P19087 354 aa15.63■□□□□ 0.09
CDK7-213ENST00000515391 RASA1P20936 1047 aa15.63■□□□□ 0.09
CDK7-213ENST00000515391 NUCB1Q02818 461 aa15.63■□□□□ 0.09
CDK7-213ENST00000515391 ICA1Q05084 483 aa15.63■□□□□ 0.09
CDK7-213ENST00000515391 GIMAP6Q6P9H5 292 aa15.63■□□□□ 0.09
CDK7-213ENST00000515391 PLEKHM2Q8IWE5 1019 aa15.63■□□□□ 0.09
CDK7-213ENST00000515391 BIN2Q9UBW5 565 aaPredicted RBP15.63■□□□□ 0.09
CDK7-213ENST00000515391 TRIM6-TRIM34B2RNG4 842 aa15.62■□□□□ 0.09
CDK7-213ENST00000515391 FOXP2O15409 715 aa15.62■□□□□ 0.09
CDK7-213ENST00000515391 ADCY3O60266 1144 aa15.62■□□□□ 0.09
CDK7-213ENST00000515391 PRDM1O75626 825 aa15.62■□□□□ 0.09
CDK7-213ENST00000515391 CNMDO75829 334 aa15.62■□□□□ 0.09
CDK7-213ENST00000515391 EEF2P13639 858 aaKnown RBP15.62■□□□□ 0.09
CDK7-213ENST00000515391 ERVK-9P63128 1117 aa15.62■□□□□ 0.09
CDK7-213ENST00000515391 ERVK-24P63145 666 aa15.62■□□□□ 0.09
CDK7-213ENST00000515391 SPICE1Q8N0Z3 855 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms