RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 TOMM22Q9NS69 142 aa14.11□□□□□ -0.15
PDLIM5-220ENST00000514830 ZBTB21Q9ULJ3 1066 aa14.11□□□□□ -0.15
PDLIM5-220ENST00000514830 PRC1O43663 620 aa14.1□□□□□ -0.15
PDLIM5-220ENST00000514830 CELF2O95319 508 aaKnown RBP14.1□□□□□ -0.15
PDLIM5-220ENST00000514830 GH2P01242 217 aa14.1□□□□□ -0.15
PDLIM5-220ENST00000514830 INPP5BP32019 993 aa14.1□□□□□ -0.15
PDLIM5-220ENST00000514830 JAG1P78504 1218 aa14.1□□□□□ -0.15
PDLIM5-220ENST00000514830 SEC23AQ15436 765 aa14.1□□□□□ -0.15
PDLIM5-220ENST00000514830 FAM47AQ5JRC9 791 aa14.1□□□□□ -0.15
PDLIM5-220ENST00000514830 STK11IPQ8N1F8 1099 aa14.1□□□□□ -0.15
PDLIM5-220ENST00000514830 TMTC2Q8N394 836 aa14.1□□□□□ -0.15
PDLIM5-220ENST00000514830 C2orf69Q8N8R5 385 aa14.1□□□□□ -0.15
PDLIM5-220ENST00000514830 IGDCC4Q8TDY8 1250 aa14.1□□□□□ -0.15
PDLIM5-220ENST00000514830 MKL1Q969V6 931 aa14.1□□□□□ -0.15
PDLIM5-220ENST00000514830 ZSCAN10Q96SZ4 725 aaPredicted RBP14.1□□□□□ -0.15
PDLIM5-220ENST00000514830 IL17RBQ9NRM6 502 aa14.1□□□□□ -0.15
PDLIM5-220ENST00000514830 MTMR4Q9NYA4 1195 aa14.1□□□□□ -0.15
PDLIM5-220ENST00000514830 NYAP2Q9P242 653 aa14.1□□□□□ -0.15
PDLIM5-220ENST00000514830 ANGEL1Q9UNK9 670 aaKnown RBP14.1□□□□□ -0.15
PDLIM5-220ENST00000514830 FOXN1O15353 648 aa14.09□□□□□ -0.15
PDLIM5-220ENST00000514830 GDF11O95390 407 aa14.09□□□□□ -0.15
PDLIM5-220ENST00000514830 EVCP57679 992 aa14.09□□□□□ -0.15
PDLIM5-220ENST00000514830 FMR1Q06787 632 aaKnown RBP eCLIP14.09□□□□□ -0.153e-9■■■■■ 33
PDLIM5-220ENST00000514830 COL9A3Q14050 684 aaPredicted RBP14.09□□□□□ -0.15
PDLIM5-220ENST00000514830 DEFB115Q30KQ5 88 aa14.09□□□□□ -0.15
PDLIM5-220ENST00000514830 RCSD1Q6JBY9 416 aa14.09□□□□□ -0.15
PDLIM5-220ENST00000514830 SGMS1Q86VZ5 419 aa14.09□□□□□ -0.15
PDLIM5-220ENST00000514830 HHIPL1Q96JK4 782 aa14.09□□□□□ -0.15
PDLIM5-220ENST00000514830 UBAC1Q9BSL1 405 aa14.09□□□□□ -0.15
PDLIM5-220ENST00000514830 WDR18Q9BV38 432 aa14.09□□□□□ -0.15
PDLIM5-220ENST00000514830 CSADQ9Y600 493 aa14.09□□□□□ -0.15
PDLIM5-220ENST00000514830 SNCAIPQ9Y6H5 919 aa14.09□□□□□ -0.15
PDLIM5-220ENST00000514830 TNKSO95271 1327 aa14.09□□□□□ -0.15
PDLIM5-220ENST00000514830 USP17L5A8MUK1 530 aa14.08□□□□□ -0.16
PDLIM5-220ENST00000514830 SH2B2O14492 632 aaPredicted RBP14.08□□□□□ -0.16
PDLIM5-220ENST00000514830 TTLL1O95922 423 aa14.08□□□□□ -0.16
PDLIM5-220ENST00000514830 PTPRAP18433 802 aa14.08□□□□□ -0.16
PDLIM5-220ENST00000514830 VEGFBP49765 207 aa14.08□□□□□ -0.16
PDLIM5-220ENST00000514830 VGLL4Q14135 290 aa14.08□□□□□ -0.16
PDLIM5-220ENST00000514830 SIAH1Q8IUQ4 282 aa14.08□□□□□ -0.16
PDLIM5-220ENST00000514830 ENAHQ8N8S7 591 aaPredicted RBP14.08□□□□□ -0.16
PDLIM5-220ENST00000514830 ZKSCAN4Q969J2 545 aaPredicted RBP14.08□□□□□ -0.16
PDLIM5-220ENST00000514830 CEP95Q96GE4 821 aa14.08□□□□□ -0.16
PDLIM5-220ENST00000514830 UPF3BQ9BZI7 483 aaKnown RBP14.08□□□□□ -0.16
PDLIM5-220ENST00000514830 PICK1Q9NRD5 415 aa14.08□□□□□ -0.16
PDLIM5-220ENST00000514830 LOC285556D6RIA3 1793 aa14.08□□□□□ -0.16
PDLIM5-220ENST00000514830 ERICH2A1L162 156 aa14.07□□□□□ -0.16
PDLIM5-220ENST00000514830 SPDYE5A6NIY4 337 aa14.07□□□□□ -0.16
PDLIM5-220ENST00000514830 MPHOSPH10O00566 681 aaKnown RBP14.07□□□□□ -0.16
PDLIM5-220ENST00000514830 IFIT3O14879 490 aaKnown RBP14.07□□□□□ -0.16
PDLIM5-220ENST00000514830 NEK4P51957 841 aa14.07□□□□□ -0.16
PDLIM5-220ENST00000514830 RCAN1P53805 252 aa14.07□□□□□ -0.16
PDLIM5-220ENST00000514830 ICA1Q05084 483 aa14.07□□□□□ -0.16
PDLIM5-220ENST00000514830 PPATQ06203 517 aa14.07□□□□□ -0.16
PDLIM5-220ENST00000514830 MAPK8IP2Q13387 824 aaPredicted RBP14.07□□□□□ -0.16
PDLIM5-220ENST00000514830 SEPT2Q15019 361 aa14.07□□□□□ -0.16
PDLIM5-220ENST00000514830 ANKRD1Q15327 319 aa14.07□□□□□ -0.16
PDLIM5-220ENST00000514830 ERO1BQ86YB8 467 aa14.07□□□□□ -0.16
PDLIM5-220ENST00000514830 LY9Q9HBG7 655 aa14.07□□□□□ -0.16
PDLIM5-220ENST00000514830 AS3MTQ9HBK9 375 aa14.07□□□□□ -0.16
PDLIM5-220ENST00000514830 PDRG1Q9NUG6 133 aa14.07□□□□□ -0.16
PDLIM5-220ENST00000514830 ABT1Q9ULW3 272 aaKnown RBP14.07□□□□□ -0.16
PDLIM5-220ENST00000514830 FZD1Q9UP38 647 aa14.07□□□□□ -0.16
PDLIM5-220ENST00000514830 UBE2Q2LH0YL09 131 aa14.06□□□□□ -0.16
PDLIM5-220ENST00000514830 NMT2O60551 498 aa14.06□□□□□ -0.16
PDLIM5-220ENST00000514830 TOP1P11387 765 aaKnown RBP14.06□□□□□ -0.16
PDLIM5-220ENST00000514830 CPA1P15085 419 aa14.06□□□□□ -0.16
PDLIM5-220ENST00000514830 ECE1P42892 770 aa14.06□□□□□ -0.16
PDLIM5-220ENST00000514830 PRKG1Q13976 671 aa14.06□□□□□ -0.16
PDLIM5-220ENST00000514830 TOB2Q14106 344 aaPredicted RBP14.06□□□□□ -0.16
PDLIM5-220ENST00000514830 TTLL12Q14166 644 aaPredicted RBP14.06□□□□□ -0.16
PDLIM5-220ENST00000514830 WTAPQ15007 396 aa14.06□□□□□ -0.16
PDLIM5-220ENST00000514830 SHROOM1Q2M3G4 852 aaPredicted RBP14.06□□□□□ -0.16
PDLIM5-220ENST00000514830 TMEM67Q5HYA8 995 aa14.06□□□□□ -0.16
PDLIM5-220ENST00000514830 MOB2Q70IA6 237 aa14.06□□□□□ -0.16
PDLIM5-220ENST00000514830 SAPCD2Q86UD0 394 aa14.06□□□□□ -0.16
PDLIM5-220ENST00000514830 MAP3K14Q99558 947 aa14.06□□□□□ -0.16
PDLIM5-220ENST00000514830 KIAA1683Q9H0B3 1180 aa14.06□□□□□ -0.16
PDLIM5-220ENST00000514830 SH2D4AQ9H788 454 aa14.06□□□□□ -0.16
PDLIM5-220ENST00000514830 ZNF408Q9H9D4 720 aa14.06□□□□□ -0.16
PDLIM5-220ENST00000514830 ARHGEF10LQ9HCE6 1279 aa14.06□□□□□ -0.16
PDLIM5-220ENST00000514830 WBP1LQ9NX94 342 aa14.06□□□□□ -0.16
PDLIM5-220ENST00000514830 TMX2Q9Y320 296 aa14.06□□□□□ -0.16
PDLIM5-220ENST00000514830 TLL2Q9Y6L7 1015 aa14.06□□□□□ -0.16
PDLIM5-220ENST00000514830 NID2Q14112 1375 aa14.06□□□□□ -0.16
PDLIM5-220ENST00000514830 ST18O60284 1047 aa14.05□□□□□ -0.16
PDLIM5-220ENST00000514830 EEF2P13639 858 aaKnown RBP14.05□□□□□ -0.16
PDLIM5-220ENST00000514830 MCM2P49736 904 aa14.05□□□□□ -0.16
PDLIM5-220ENST00000514830 LBX1P52954 281 aa14.05□□□□□ -0.16
PDLIM5-220ENST00000514830 PPIL2Q13356 520 aa14.05□□□□□ -0.16
PDLIM5-220ENST00000514830 RAB3GAP1Q15042 981 aa14.05□□□□□ -0.16
PDLIM5-220ENST00000514830 IFIT1BQ5T764 474 aaKnown RBP14.05□□□□□ -0.16
PDLIM5-220ENST00000514830 Q6ZUG5 572 aa14.05□□□□□ -0.16
PDLIM5-220ENST00000514830 CHST3Q7LGC8 479 aa14.05□□□□□ -0.16
PDLIM5-220ENST00000514830 ZNF280CQ8ND82 737 aa14.05□□□□□ -0.16
PDLIM5-220ENST00000514830 GMCL1P1Q8NEA9 526 aa14.05□□□□□ -0.16
PDLIM5-220ENST00000514830 TMEM47Q9BQJ4 181 aa14.05□□□□□ -0.16
PDLIM5-220ENST00000514830 ZKSCAN3Q9BRR0 538 aa14.05□□□□□ -0.16
PDLIM5-220ENST00000514830 KCNH4Q9UQ05 1017 aa14.05□□□□□ -0.16
PDLIM5-220ENST00000514830 AFG3L2Q9Y4W6 797 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms