RNA–Protein interactions for RNA: ENST00000514778.1

SMAD1-213, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-213ENST00000514778 TRPM7Q96QT4 1865 aa8.45□□□□□ -1.06
SMAD1-213ENST00000514778 SPDYE5A6NIY4 337 aa8.44□□□□□ -1.06
SMAD1-213ENST00000514778 UBE2Q2LH0YL09 131 aa8.44□□□□□ -1.06
SMAD1-213ENST00000514778 FOXP2O15409 715 aa8.44□□□□□ -1.06
SMAD1-213ENST00000514778 FGAP02671 866 aa8.44□□□□□ -1.06
SMAD1-213ENST00000514778 ASNSP08243 561 aa8.44□□□□□ -1.06
SMAD1-213ENST00000514778 FGRP09769 529 aa8.44□□□□□ -1.06
SMAD1-213ENST00000514778 MAP2K2P36507 400 aa8.44□□□□□ -1.06
SMAD1-213ENST00000514778 PLCD1P51178 756 aa8.44□□□□□ -1.06
SMAD1-213ENST00000514778 PPATQ06203 517 aa8.44□□□□□ -1.06
SMAD1-213ENST00000514778 PDE4BQ07343 736 aa8.44□□□□□ -1.06
SMAD1-213ENST00000514778 NOGQ13253 232 aa8.44□□□□□ -1.06
SMAD1-213ENST00000514778 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.44□□□□□ -1.06
SMAD1-213ENST00000514778 KIAA1211Q6ZU35 1233 aa8.44□□□□□ -1.06
SMAD1-213ENST00000514778 C16orf86Q6ZW13 317 aa8.44□□□□□ -1.06
SMAD1-213ENST00000514778 MIGA2Q7L4E1 593 aa8.44□□□□□ -1.06
SMAD1-213ENST00000514778 ZNF589Q86UQ0 364 aaPredicted RBP8.44□□□□□ -1.06
SMAD1-213ENST00000514778 ERO1BQ86YB8 467 aa8.44□□□□□ -1.06
SMAD1-213ENST00000514778 SCYL3Q8IZE3 742 aa8.44□□□□□ -1.06
SMAD1-213ENST00000514778 ESYT1Q9BSJ8 1104 aa8.44□□□□□ -1.06
SMAD1-213ENST00000514778 EPB41L4AQ9HCS5 686 aaPredicted RBP8.44□□□□□ -1.06
SMAD1-213ENST00000514778 PICK1Q9NRD5 415 aa8.44□□□□□ -1.06
SMAD1-213ENST00000514778 SAP30BPQ9UHR5 308 aaKnown RBP8.44□□□□□ -1.06
SMAD1-213ENST00000514778 CXCL11O14625 94 aa8.43□□□□□ -1.06
SMAD1-213ENST00000514778 SLC10A3P09131 477 aa8.43□□□□□ -1.06
SMAD1-213ENST00000514778 CAP2P40123 477 aa8.43□□□□□ -1.06
SMAD1-213ENST00000514778 ZNF157P51786 506 aaPredicted RBP8.43□□□□□ -1.06
SMAD1-213ENST00000514778 VGLL4Q14135 290 aa8.43□□□□□ -1.06
SMAD1-213ENST00000514778 CERKLQ49MI3 558 aaPredicted RBP8.43□□□□□ -1.06
SMAD1-213ENST00000514778 CCDC129Q6ZRS4 1044 aa8.43□□□□□ -1.06
SMAD1-213ENST00000514778 MAP4K1Q92918 833 aa8.43□□□□□ -1.06
SMAD1-213ENST00000514778 RNF41Q9H4P4 317 aaPredicted RBP8.43□□□□□ -1.06
SMAD1-213ENST00000514778 DNAJC18Q9H819 358 aa8.43□□□□□ -1.06
SMAD1-213ENST00000514778 AS3MTQ9HBK9 375 aa8.43□□□□□ -1.06
SMAD1-213ENST00000514778 GTF3C3Q9Y5Q9 886 aa8.43□□□□□ -1.06
SMAD1-213ENST00000514778 MINDY4BA8MYZ0 360 aa8.42□□□□□ -1.06
SMAD1-213ENST00000514778 ZNF213O14771 459 aa8.42□□□□□ -1.06
SMAD1-213ENST00000514778 REC8O95072 547 aa8.42□□□□□ -1.06
SMAD1-213ENST00000514778 INPP5BP32019 993 aa8.42□□□□□ -1.06
SMAD1-213ENST00000514778 SHMT1P34896 483 aa8.42□□□□□ -1.06
SMAD1-213ENST00000514778 CDK8P49336 464 aa8.42□□□□□ -1.06
SMAD1-213ENST00000514778 PPARAQ07869 468 aa8.42□□□□□ -1.06
SMAD1-213ENST00000514778 PPIL2Q13356 520 aa8.42□□□□□ -1.06
SMAD1-213ENST00000514778 PRKG1Q13976 671 aa8.42□□□□□ -1.06
SMAD1-213ENST00000514778 IMMTQ16891 758 aaKnown RBP8.42□□□□□ -1.06
SMAD1-213ENST00000514778 VPS53Q5VIR6 699 aa8.42□□□□□ -1.06
SMAD1-213ENST00000514778 SPRYD7Q5W111 196 aa8.42□□□□□ -1.06
SMAD1-213ENST00000514778 MOB2Q70IA6 237 aa8.42□□□□□ -1.06
SMAD1-213ENST00000514778 RASAL3Q86YV0 1011 aa8.42□□□□□ -1.06
SMAD1-213ENST00000514778 DNAJC5GQ8N7S2 189 aa8.42□□□□□ -1.06
SMAD1-213ENST00000514778 CAPNS2Q96L46 248 aa8.42□□□□□ -1.06
SMAD1-213ENST00000514778 WDR18Q9BV38 432 aa8.42□□□□□ -1.06
SMAD1-213ENST00000514778 SLC4A5Q9BY07 1137 aa8.42□□□□□ -1.06
SMAD1-213ENST00000514778 MKNK2Q9HBH9 465 aa8.42□□□□□ -1.06
SMAD1-213ENST00000514778 CABP5Q9NP86 173 aa8.42□□□□□ -1.06
SMAD1-213ENST00000514778 EMILIN3Q9NT22 766 aa8.42□□□□□ -1.06
SMAD1-213ENST00000514778 SYNPO2Q9UMS6 1093 aa8.42□□□□□ -1.06
SMAD1-213ENST00000514778 SNCAIPQ9Y6H5 919 aa8.42□□□□□ -1.06
SMAD1-213ENST00000514778 WDR33Q9C0J8 1336 aaKnown RBP8.42□□□□□ -1.06
SMAD1-213ENST00000514778 CDK5RAP2Q96SN8 1893 aa8.42□□□□□ -1.06
SMAD1-213ENST00000514778 AK9Q5TCS8 1911 aa8.42□□□□□ -1.06
SMAD1-213ENST00000514778 POLR2AP24928 1970 aaKnown RBP8.42□□□□□ -1.06
SMAD1-213ENST00000514778 NAV1Q8NEY1 1877 aa8.41□□□□□ -1.06
SMAD1-213ENST00000514778 TESPA1A2RU30 521 aaPredicted RBP8.41□□□□□ -1.06
SMAD1-213ENST00000514778 MANSC4A6NHS7 340 aaPredicted RBP8.41□□□□□ -1.06
SMAD1-213ENST00000514778 USP17L5A8MUK1 530 aa8.41□□□□□ -1.06
SMAD1-213ENST00000514778 FAM155AB1AL88 458 aaPredicted RBP8.41□□□□□ -1.06
SMAD1-213ENST00000514778 ORC4O43929 436 aa8.41□□□□□ -1.06
SMAD1-213ENST00000514778 CYP2D6P10635 497 aa8.41□□□□□ -1.06
SMAD1-213ENST00000514778 PTPRAP18433 802 aa8.41□□□□□ -1.06
SMAD1-213ENST00000514778 PTPREP23469 700 aa8.41□□□□□ -1.06
SMAD1-213ENST00000514778 GTF2A2P52657 109 aa8.41□□□□□ -1.06
SMAD1-213ENST00000514778 SREBF2Q12772 1141 aa8.41□□□□□ -1.06
SMAD1-213ENST00000514778 ABCB5Q2M3G0 1257 aa8.41□□□□□ -1.06
SMAD1-213ENST00000514778 TMEM179Q6ZVK1 233 aa8.41□□□□□ -1.06
SMAD1-213ENST00000514778 SKAP1Q86WV1 359 aa8.41□□□□□ -1.06
SMAD1-213ENST00000514778 ZNF444Q8N0Y2 327 aaPredicted RBP8.41□□□□□ -1.06
SMAD1-213ENST00000514778 STAG1Q8WVM7 1258 aa8.41□□□□□ -1.06
SMAD1-213ENST00000514778 ZKSCAN4Q969J2 545 aaPredicted RBP8.41□□□□□ -1.06
SMAD1-213ENST00000514778 OPTNQ96CV9 577 aa8.41□□□□□ -1.06
SMAD1-213ENST00000514778 WNK4Q96J92 1243 aa8.41□□□□□ -1.06
SMAD1-213ENST00000514778 LSG1Q9H089 658 aaKnown RBP8.41□□□□□ -1.06
SMAD1-213ENST00000514778 CNNM2Q9H8M5 875 aa8.41□□□□□ -1.06
SMAD1-213ENST00000514778 KANSL2Q9H9L4 492 aa8.41□□□□□ -1.06
SMAD1-213ENST00000514778 ZCCHC17Q9NP64 241 aaKnown RBP8.41□□□□□ -1.06
SMAD1-213ENST00000514778 ZBTB21Q9ULJ3 1066 aa8.41□□□□□ -1.06
SMAD1-213ENST00000514778 KCNH4Q9UQ05 1017 aa8.41□□□□□ -1.06
SMAD1-213ENST00000514778 AFG3L2Q9Y4W6 797 aa8.41□□□□□ -1.06
SMAD1-213ENST00000514778 PLIN4Q96Q06 1357 aa8.4□□□□□ -1.06
SMAD1-213ENST00000514778 C19orf81C9J6K1 198 aa8.4□□□□□ -1.06
SMAD1-213ENST00000514778 CETPP11597 493 aa8.4□□□□□ -1.06
SMAD1-213ENST00000514778 TM4SF4P48230 202 aa8.4□□□□□ -1.06
SMAD1-213ENST00000514778 VEGFBP49765 207 aa8.4□□□□□ -1.06
SMAD1-213ENST00000514778 SNAPC2Q13487 334 aa8.4□□□□□ -1.06
SMAD1-213ENST00000514778 TSGA10IPQ3SY00 556 aa8.4□□□□□ -1.06
SMAD1-213ENST00000514778 AKNAD1Q5T1N1 836 aa8.4□□□□□ -1.06
SMAD1-213ENST00000514778 RNF20Q5VTR2 975 aa8.4□□□□□ -1.06
SMAD1-213ENST00000514778 MFSD6Q6ZSS7 791 aa8.4□□□□□ -1.06
SMAD1-213ENST00000514778 JMYQ8N9B5 988 aa8.4□□□□□ -1.06
SMAD1-213ENST00000514778 ZNF280CQ8ND82 737 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms