RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 RASA3Q14644 834 aa23.03■■□□□ 1.28
SSBP2-218ENST00000514493 CLEC17AQ6ZS10 378 aa23.03■■□□□ 1.28
SSBP2-218ENST00000514493 CATIPQ7Z7H3 387 aa23.03■■□□□ 1.28
SSBP2-218ENST00000514493 APOBEC3FQ8IUX4 373 aaKnown RBP23.03■■□□□ 1.28
SSBP2-218ENST00000514493 SMARCC2Q8TAQ2 1214 aa23.03■■□□□ 1.28
SSBP2-218ENST00000514493 WDR90Q96KV7 1748 aa23.03■■□□□ 1.28
SSBP2-218ENST00000514493 WDR33Q9C0J8 1336 aaKnown RBP23.02■■□□□ 1.28
SSBP2-218ENST00000514493 IGKV6D-41A0A0C4DH26 115 aa23.02■■□□□ 1.28
SSBP2-218ENST00000514493 GLTPD2A6NH11 291 aa23.02■■□□□ 1.28
SSBP2-218ENST00000514493 CTDNEP1O95476 244 aa23.02■■□□□ 1.28
SSBP2-218ENST00000514493 NOVP48745 357 aa23.02■■□□□ 1.28
SSBP2-218ENST00000514493 CDAN1Q8IWY9 1227 aa23.02■■□□□ 1.28
SSBP2-218ENST00000514493 CEP95Q96GE4 821 aa23.02■■□□□ 1.28
SSBP2-218ENST00000514493 JAK2O60674 1132 aa23.01■■□□□ 1.27
SSBP2-218ENST00000514493 PTPDC1A2A3K4 754 aa23.01■■□□□ 1.27
SSBP2-218ENST00000514493 CALM1P0DP23 149 aa23.01■■□□□ 1.27
SSBP2-218ENST00000514493 CALM2P0DP24 149 aa23.01■■□□□ 1.27
SSBP2-218ENST00000514493 CALM3P0DP25 149 aa23.01■■□□□ 1.27
SSBP2-218ENST00000514493 MCM4P33991 863 aa23.01■■□□□ 1.27
SSBP2-218ENST00000514493 HIRAP54198 1017 aaPredicted RBP23.01■■□□□ 1.27
SSBP2-218ENST00000514493 TROAPQ12815 778 aa23.01■■□□□ 1.27
SSBP2-218ENST00000514493 RTN1Q16799 776 aa23.01■■□□□ 1.27
SSBP2-218ENST00000514493 CERKLQ49MI3 558 aaPredicted RBP23.01■■□□□ 1.27
SSBP2-218ENST00000514493 ANGEL2Q5VTE6 544 aaKnown RBP23.01■■□□□ 1.27
SSBP2-218ENST00000514493 TEPSINQ96N21 525 aa23.01■■□□□ 1.27
SSBP2-218ENST00000514493 KAT14Q9H8E8 782 aa23.01■■□□□ 1.27
SSBP2-218ENST00000514493 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.01■■□□□ 1.27
SSBP2-218ENST00000514493 GGA3Q9NZ52 723 aa23.01■■□□□ 1.27
SSBP2-218ENST00000514493 CPLX1O14810 134 aa23■■□□□ 1.27
SSBP2-218ENST00000514493 TBC1D12O60347 775 aa23■■□□□ 1.27
SSBP2-218ENST00000514493 PDIA4P13667 645 aaKnown RBP23■■□□□ 1.27
SSBP2-218ENST00000514493 SYT1P21579 422 aa23■■□□□ 1.27
SSBP2-218ENST00000514493 CDC27P30260 824 aa23■■□□□ 1.27
SSBP2-218ENST00000514493 HMGN5P82970 282 aaKnown RBP23■■□□□ 1.27
SSBP2-218ENST00000514493 CCDC144CPQ8IYA2 1237 aa23■■□□□ 1.27
SSBP2-218ENST00000514493 NUP133Q8WUM0 1156 aa23■■□□□ 1.27
SSBP2-218ENST00000514493 FAM217BQ9NTX9 383 aaPredicted RBP23■■□□□ 1.27
SSBP2-218ENST00000514493 STX8Q9UNK0 236 aa23■■□□□ 1.27
SSBP2-218ENST00000514493 STX6O43752 255 aa22.99■■□□□ 1.27
SSBP2-218ENST00000514493 DTNBO60941 627 aa22.99■■□□□ 1.27
SSBP2-218ENST00000514493 PDCP20941 246 aa22.99■■□□□ 1.27
SSBP2-218ENST00000514493 PPP2R5BQ15173 497 aa22.99■■□□□ 1.27
SSBP2-218ENST00000514493 MTMR4Q9NYA4 1195 aa22.99■■□□□ 1.27
SSBP2-218ENST00000514493 SCAF8Q9UPN6 1271 aaKnown RBP22.99■■□□□ 1.27
SSBP2-218ENST00000514493 PITPNM2Q9BZ72 1349 aa22.99■■□□□ 1.27
SSBP2-218ENST00000514493 POTECB2RU33 542 aa22.99■■□□□ 1.27
SSBP2-218ENST00000514493 MPHOSPH10O00566 681 aaKnown RBP22.99■■□□□ 1.27
SSBP2-218ENST00000514493 CPLX2Q6PUV4 134 aaKnown RBP22.99■■□□□ 1.27
SSBP2-218ENST00000514493 ZNF784Q8NCA9 323 aaPredicted RBP22.99■■□□□ 1.27
SSBP2-218ENST00000514493 PNMA1Q8ND90 353 aa22.99■■□□□ 1.27
SSBP2-218ENST00000514493 TMEM47Q9BQJ4 181 aa22.99■■□□□ 1.27
SSBP2-218ENST00000514493 DEFB129Q9H1M3 183 aa22.99■■□□□ 1.27
SSBP2-218ENST00000514493 CCDC196A0A1B0GTZ2 297 aa22.98■■□□□ 1.27
SSBP2-218ENST00000514493 CDKL5O76039 1030 aa22.98■■□□□ 1.27
SSBP2-218ENST00000514493 ADD1P35611 737 aaKnown RBP22.98■■□□□ 1.27
SSBP2-218ENST00000514493 MAP3K10Q02779 954 aa22.98■■□□□ 1.27
SSBP2-218ENST00000514493 PPP4R3BQ5MIZ7 849 aa22.98■■□□□ 1.27
SSBP2-218ENST00000514493 FANCBQ8NB91 859 aa22.98■■□□□ 1.27
SSBP2-218ENST00000514493 NMRK2Q9NPI5 230 aa22.98■■□□□ 1.27
SSBP2-218ENST00000514493 DDX11L8A8MPP1 907 aa22.97■■□□□ 1.27
SSBP2-218ENST00000514493 TOP1P11387 765 aaKnown RBP22.97■■□□□ 1.27
SSBP2-218ENST00000514493 TMEM179Q6ZVK1 233 aa22.97■■□□□ 1.27
SSBP2-218ENST00000514493 RRAGCQ9HB90 399 aa22.97■■□□□ 1.27
SSBP2-218ENST00000514493 RBM28Q9NW13 759 aaKnown RBP22.97■■□□□ 1.27
SSBP2-218ENST00000514493 PPP2R3BQ9Y5P8 575 aa22.97■■□□□ 1.27
SSBP2-218ENST00000514493 DOCK1Q14185 1865 aa22.97■■□□□ 1.27
SSBP2-218ENST00000514493 GDF11O95390 407 aa22.96■■□□□ 1.27
SSBP2-218ENST00000514493 BAG4O95429 457 aaKnown RBP22.96■■□□□ 1.27
SSBP2-218ENST00000514493 NTRK3Q16288 839 aa22.96■■□□□ 1.27
SSBP2-218ENST00000514493 ABCB5Q2M3G0 1257 aa22.96■■□□□ 1.27
SSBP2-218ENST00000514493 DDX11Q96FC9 970 aa22.96■■□□□ 1.27
SSBP2-218ENST00000514493 MAP3K14Q99558 947 aa22.96■■□□□ 1.27
SSBP2-218ENST00000514493 TTLL1O95922 423 aa22.96■■□□□ 1.27
SSBP2-218ENST00000514493 ZSCAN22P10073 491 aaPredicted RBP22.96■■□□□ 1.27
SSBP2-218ENST00000514493 LARP1BQ659C4 914 aaKnown RBP22.96■■□□□ 1.27
SSBP2-218ENST00000514493 KIF3AQ9Y496 699 aa22.96■■□□□ 1.27
SSBP2-218ENST00000514493 IFNAR1P17181 557 aa22.95■■□□□ 1.26
SSBP2-218ENST00000514493 RRP1BQ14684 758 aaKnown RBP22.95■■□□□ 1.26
SSBP2-218ENST00000514493 SHROOM1Q2M3G4 852 aaPredicted RBP22.95■■□□□ 1.26
SSBP2-218ENST00000514493 FOXD4L5Q5VV16 416 aaPredicted RBP22.95■■□□□ 1.26
SSBP2-218ENST00000514493 CLEC10AQ8IUN9 316 aa22.95■■□□□ 1.26
SSBP2-218ENST00000514493 FAM184AQ8NB25 1140 aa22.95■■□□□ 1.26
SSBP2-218ENST00000514493 CTCFLQ8NI51 663 aaPredicted RBP22.95■■□□□ 1.26
SSBP2-218ENST00000514493 FOXD4L4Q8WXT5 416 aaPredicted RBP22.95■■□□□ 1.26
SSBP2-218ENST00000514493 BAZ2BQ9UIF8 2168 aaKnown RBP22.95■■□□□ 1.26
SSBP2-218ENST00000514493 MTMR6Q9Y217 621 aa22.94■■□□□ 1.26
SSBP2-218ENST00000514493 STK36Q9NRP7 1315 aa22.94■■□□□ 1.26
SSBP2-218ENST00000514493 GUCY1A2P33402 732 aa22.94■■□□□ 1.26
SSBP2-218ENST00000514493 EPHX2P34913 555 aa22.94■■□□□ 1.26
SSBP2-218ENST00000514493 GRM4Q14833 912 aa22.94■■□□□ 1.26
SSBP2-218ENST00000514493 USP50Q70EL3 339 aaPredicted RBP22.94■■□□□ 1.26
SSBP2-218ENST00000514493 MIGA2Q7L4E1 593 aa22.94■■□□□ 1.26
SSBP2-218ENST00000514493 KANSL2Q9H9L4 492 aa22.94■■□□□ 1.26
SSBP2-218ENST00000514493 GOLGA6L22H0YM25 854 aa22.93■■□□□ 1.26
SSBP2-218ENST00000514493 GH2P01242 217 aa22.93■■□□□ 1.26
SSBP2-218ENST00000514493 FDPSP14324 419 aaKnown RBP22.93■■□□□ 1.26
SSBP2-218ENST00000514493 KIF5BP33176 963 aa22.93■■□□□ 1.26
SSBP2-218ENST00000514493 SEPT2Q15019 361 aa22.93■■□□□ 1.26
SSBP2-218ENST00000514493 TMTC3Q6ZXV5 915 aa22.93■■□□□ 1.26
SSBP2-218ENST00000514493 CABP5Q9NP86 173 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms