RNA–Protein interactions for RNA: ENST00000514326.5

SEC31A-238, Transcript of SEC31 homolog A, COPII coat complex component, human

TSL 3

Gene SEC31A, Length 847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC31A-238	ENST00000514326	C16orf86	Q6ZW13	317 aa		18.86	■□□□□ 0.61
SEC31A-238	ENST00000514326	STK11IP	Q8N1F8	1099 aa		18.86	■□□□□ 0.61
SEC31A-238	ENST00000514326	P2RX7	Q99572	595 aa	Known RBP	18.86	■□□□□ 0.61
SEC31A-238	ENST00000514326	BAZ2A	Q9UIF9	1905 aa	Known RBP	18.86	■□□□□ 0.61
SEC31A-238	ENST00000514326		A0A1W2PRG0	241 aa		18.85	■□□□□ 0.61
SEC31A-238	ENST00000514326	MINDY4B	A8MYZ0	360 aa		18.85	■□□□□ 0.61
SEC31A-238	ENST00000514326	PEX10	O60683	326 aa		18.85	■□□□□ 0.61
SEC31A-238	ENST00000514326	APP	P05067	770 aa		18.85	■□□□□ 0.61
SEC31A-238	ENST00000514326	IRX3	P78415	501 aa	Predicted RBP	18.85	■□□□□ 0.61
SEC31A-238	ENST00000514326	SBK1	Q52WX2	424 aa		18.85	■□□□□ 0.61
SEC31A-238	ENST00000514326	GIMAP6	Q6P9H5	292 aa		18.85	■□□□□ 0.61
SEC31A-238	ENST00000514326	CLEC10A	Q8IUN9	316 aa		18.85	■□□□□ 0.61
SEC31A-238	ENST00000514326	EVI5L	Q96CN4	794 aa		18.85	■□□□□ 0.61
SEC31A-238	ENST00000514326	KIAA1683	Q9H0B3	1180 aa		18.85	■□□□□ 0.61
SEC31A-238	ENST00000514326	ARPP21	Q9UBL0	812 aa	Predicted RBP	18.85	■□□□□ 0.61
SEC31A-238	ENST00000514326	SRRD	Q9UH36	339 aa		18.85	■□□□□ 0.61
SEC31A-238	ENST00000514326	PATL2	C9JE40	543 aa	Known RBP	18.84	■□□□□ 0.61
SEC31A-238	ENST00000514326	GNRH1	P01148	92 aa		18.84	■□□□□ 0.61
SEC31A-238	ENST00000514326	GNAT2	P19087	354 aa		18.84	■□□□□ 0.61
SEC31A-238	ENST00000514326	GCLC	P48506	637 aa	Predicted RBP	18.84	■□□□□ 0.61
SEC31A-238	ENST00000514326	FCGRT	P55899	365 aa		18.84	■□□□□ 0.61
SEC31A-238	ENST00000514326	CCDC129	Q6ZRS4	1044 aa		18.84	■□□□□ 0.61
SEC31A-238	ENST00000514326	TMEM179	Q6ZVK1	233 aa		18.84	■□□□□ 0.61
SEC31A-238	ENST00000514326	PLEKHM2	Q8IWE5	1019 aa		18.84	■□□□□ 0.61
SEC31A-238	ENST00000514326	ARMC5	Q96C12	935 aa		18.84	■□□□□ 0.61
SEC31A-238	ENST00000514326	C12orf42	Q96LP6	360 aa		18.84	■□□□□ 0.61
SEC31A-238	ENST00000514326	TAOK2	Q9UL54	1235 aa		18.84	■□□□□ 0.61
SEC31A-238	ENST00000514326	TDO2	P48775	406 aa		18.83	■□□□□ 0.6
SEC31A-238	ENST00000514326	USP14	P54578	494 aa		18.83	■□□□□ 0.6
SEC31A-238	ENST00000514326	HERVK_113	P62684	666 aa		18.83	■□□□□ 0.6
SEC31A-238	ENST00000514326	PRKCZ	Q05513	592 aa		18.83	■□□□□ 0.6
SEC31A-238	ENST00000514326	FAM110C	Q1W6H9	321 aa		18.83	■□□□□ 0.6
SEC31A-238	ENST00000514326	SLC9C1	Q4G0N8	1177 aa		18.83	■□□□□ 0.6
SEC31A-238	ENST00000514326	SIAH1	Q8IUQ4	282 aa		18.83	■□□□□ 0.6
SEC31A-238	ENST00000514326	IFNL3	Q8IZI9	196 aa		18.83	■□□□□ 0.6
SEC31A-238	ENST00000514326	SH3TC2	Q8TF17	1288 aa		18.83	■□□□□ 0.6
SEC31A-238	ENST00000514326	CCDC17	Q96LX7	622 aa		18.83	■□□□□ 0.6
SEC31A-238	ENST00000514326	GABRQ	Q9UN88	632 aa		18.83	■□□□□ 0.6
SEC31A-238	ENST00000514326	MYPN	Q86TC9	1320 aa		18.82	■□□□□ 0.6
SEC31A-238	ENST00000514326	VCAM1	P19320	739 aa		18.82	■□□□□ 0.6
SEC31A-238	ENST00000514326	HOXD10	P28358	340 aa		18.82	■□□□□ 0.6
SEC31A-238	ENST00000514326	PRMT2	P55345	433 aa		18.82	■□□□□ 0.6
SEC31A-238	ENST00000514326	POTEE	Q6S8J3	1075 aa		18.82	■□□□□ 0.6
SEC31A-238	ENST00000514326	TXNRD2	Q9NNW7	524 aa		18.82	■□□□□ 0.6
SEC31A-238	ENST00000514326	TRIM6-TRIM34	B2RNG4	842 aa		18.81	■□□□□ 0.6
SEC31A-238	ENST00000514326	USP17L15	C9J2P7	530 aa		18.81	■□□□□ 0.6
SEC31A-238	ENST00000514326	USP17L13	C9JLJ4	530 aa		18.81	■□□□□ 0.6
SEC31A-238	ENST00000514326	USP17L11	C9JVI0	530 aa		18.81	■□□□□ 0.6
SEC31A-238	ENST00000514326	USP17L18	D6R9N7	530 aa		18.81	■□□□□ 0.6
SEC31A-238	ENST00000514326	USP17L22	D6RA61	530 aa		18.81	■□□□□ 0.6
SEC31A-238	ENST00000514326	USP17L17	D6RBQ6	530 aa		18.81	■□□□□ 0.6
SEC31A-238	ENST00000514326	USP17L19	D6RCP7	530 aa		18.81	■□□□□ 0.6
SEC31A-238	ENST00000514326	USP17L20	D6RJB6	530 aa		18.81	■□□□□ 0.6
SEC31A-238	ENST00000514326	FOXP2	O15409	715 aa		18.81	■□□□□ 0.6
SEC31A-238	ENST00000514326	MYC	P01106	439 aa	Predicted RBP	18.81	■□□□□ 0.6
SEC31A-238	ENST00000514326	USP17L24	Q0WX57	530 aa		18.81	■□□□□ 0.6
SEC31A-238	ENST00000514326	KIAA1755	Q5JYT7	1200 aa		18.81	■□□□□ 0.6
SEC31A-238	ENST00000514326	RAET1E	Q8TD07	263 aa		18.81	■□□□□ 0.6
SEC31A-238	ENST00000514326	RILPL2	Q969X0	211 aa		18.81	■□□□□ 0.6
SEC31A-238	ENST00000514326	ZNF333	Q96JL9	665 aa		18.81	■□□□□ 0.6
SEC31A-238	ENST00000514326	FAM227B	Q96M60	508 aa		18.81	■□□□□ 0.6
SEC31A-238	ENST00000514326	RBPJL	Q9UBG7	517 aa		18.81	■□□□□ 0.6
SEC31A-238	ENST00000514326	MORF4L1	Q9UBU8	362 aa		18.81	■□□□□ 0.6
SEC31A-238	ENST00000514326	CENPF	P49454	3210 aa		18.8	■□□□□ 0.6
SEC31A-238	ENST00000514326	TNPO2	O14787	897 aa	Known RBP	18.8	■□□□□ 0.6
SEC31A-238	ENST00000514326	MLLT1	Q03111	559 aa	Predicted RBP	18.8	■□□□□ 0.6
SEC31A-238	ENST00000514326	ICA1	Q05084	483 aa		18.8	■□□□□ 0.6
SEC31A-238	ENST00000514326	CATSPERG	Q6ZRH7	1159 aa		18.8	■□□□□ 0.6
SEC31A-238	ENST00000514326	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	18.8	■□□□□ 0.6
SEC31A-238	ENST00000514326	OSBPL3	Q9H4L5	887 aa		18.8	■□□□□ 0.6
SEC31A-238	ENST00000514326	RPAP3	Q9H6T3	665 aa	Predicted RBP	18.8	■□□□□ 0.6
SEC31A-238	ENST00000514326	MKNK2	Q9HBH9	465 aa		18.8	■□□□□ 0.6
SEC31A-238	ENST00000514326		A0A0D9SFI3	127 aa		18.79	■□□□□ 0.6
SEC31A-238	ENST00000514326	POTEF	A5A3E0	1075 aa		18.79	■□□□□ 0.6
SEC31A-238	ENST00000514326	RASA1	P20936	1047 aa		18.79	■□□□□ 0.6
SEC31A-238	ENST00000514326	FLT3LG	P49771	235 aa		18.79	■□□□□ 0.6
SEC31A-238	ENST00000514326	ATP2B2	Q01814	1243 aa		18.79	■□□□□ 0.6
SEC31A-238	ENST00000514326	VPS53	Q5VIR6	699 aa		18.79	■□□□□ 0.6
SEC31A-238	ENST00000514326	NBPF11	Q86T75	865 aa		18.79	■□□□□ 0.6
SEC31A-238	ENST00000514326	PAGR1	Q9BTK6	254 aa		18.79	■□□□□ 0.6
SEC31A-238	ENST00000514326	NACAP1	Q9BZK3	213 aa		18.79	■□□□□ 0.6
SEC31A-238	ENST00000514326	ROBO3	Q96MS0	1386 aa		18.79	■□□□□ 0.6
SEC31A-238	ENST00000514326	PRDM1	O75626	825 aa		18.78	■□□□□ 0.6
SEC31A-238	ENST00000514326	EEF2	P13639	858 aa	Known RBP	18.78	■□□□□ 0.6
SEC31A-238	ENST00000514326	PDE4A	P27815	886 aa		18.78	■□□□□ 0.6
SEC31A-238	ENST00000514326	NMI	Q13287	307 aa	Predicted RBP	18.78	■□□□□ 0.6
SEC31A-238	ENST00000514326		Q3C1V9	767 aa		18.78	■□□□□ 0.6
SEC31A-238	ENST00000514326	GPRC5A	Q8NFJ5	357 aa		18.78	■□□□□ 0.6
SEC31A-238	ENST00000514326	NAPB	Q9H115	298 aa		18.78	■□□□□ 0.6
SEC31A-238	ENST00000514326	ARHGEF10L	Q9HCE6	1279 aa		18.78	■□□□□ 0.6
SEC31A-238	ENST00000514326	HELLS	Q9NRZ9	838 aa		18.78	■□□□□ 0.6
SEC31A-238	ENST00000514326	TMX2	Q9Y320	296 aa		18.78	■□□□□ 0.6
SEC31A-238	ENST00000514326	GRK4	P32298	578 aa		18.77	■□□□□ 0.6
SEC31A-238	ENST00000514326	SPICE1	Q8N0Z3	855 aa		18.77	■□□□□ 0.6
SEC31A-238	ENST00000514326	COA7	Q96BR5	231 aa		18.77	■□□□□ 0.6
SEC31A-238	ENST00000514326	KANSL2	Q9H9L4	492 aa		18.77	■□□□□ 0.6
SEC31A-238	ENST00000514326	CNMD	O75829	334 aa		18.76	■□□□□ 0.59
SEC31A-238	ENST00000514326	ERVK-9	P63128	1117 aa		18.76	■□□□□ 0.59
SEC31A-238	ENST00000514326	ERVK-24	P63145	666 aa		18.76	■□□□□ 0.59
SEC31A-238	ENST00000514326	PPARA	Q07869	468 aa		18.76	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms