RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 OSBPP22059 807 aa21.23■□□□□ 0.99
DDR1-272ENST00000513243 PDE4AP27815 886 aa21.23■□□□□ 0.99
DDR1-272ENST00000513243 CTGFP29279 349 aa21.23■□□□□ 0.99
DDR1-272ENST00000513243 TDO2P48775 406 aa21.23■□□□□ 0.99
DDR1-272ENST00000513243 TMEM179Q6ZVK1 233 aa21.23■□□□□ 0.99
DDR1-272ENST00000513243 TICAM2Q86XR7 235 aa21.23■□□□□ 0.99
DDR1-272ENST00000513243 RILPL2Q969X0 211 aa21.23■□□□□ 0.99
DDR1-272ENST00000513243 CCDC17Q96LX7 622 aa21.23■□□□□ 0.99
DDR1-272ENST00000513243 FAM227BQ96M60 508 aa21.23■□□□□ 0.99
DDR1-272ENST00000513243 FEZ1Q99689 392 aa21.23■□□□□ 0.99
DDR1-272ENST00000513243 KIAA1683Q9H0B3 1180 aa21.23■□□□□ 0.99
DDR1-272ENST00000513243 FOXP2O15409 715 aa21.22■□□□□ 0.99
DDR1-272ENST00000513243 HOXA7P31268 230 aaPredicted RBP21.22■□□□□ 0.99
DDR1-272ENST00000513243 ZYXQ15942 572 aaKnown RBP21.22■□□□□ 0.99
DDR1-272ENST00000513243 C12orf42Q96LP6 360 aa21.22■□□□□ 0.99
DDR1-272ENST00000513243 NACAP1Q9BZK3 213 aa21.22■□□□□ 0.99
DDR1-272ENST00000513243 HELLSQ9NRZ9 838 aa21.22■□□□□ 0.99
DDR1-272ENST00000513243 A0A0D9SFI3 127 aa21.21■□□□□ 0.99
DDR1-272ENST00000513243 A0A1W2PRG0 241 aa21.21■□□□□ 0.99
DDR1-272ENST00000513243 PSMC4P43686 418 aa21.21■□□□□ 0.99
DDR1-272ENST00000513243 STK11IPQ8N1F8 1099 aa21.21■□□□□ 0.99
DDR1-272ENST00000513243 TRIM47Q96LD4 638 aa21.21■□□□□ 0.99
DDR1-272ENST00000513243 ROBO3Q96MS0 1386 aa21.21■□□□□ 0.99
DDR1-272ENST00000513243 ZSWIM8A7E2V4 1837 aa21.2■□□□□ 0.98
DDR1-272ENST00000513243 USP14P54578 494 aa21.2■□□□□ 0.98
DDR1-272ENST00000513243 NMIQ13287 307 aaPredicted RBP21.2■□□□□ 0.98
DDR1-272ENST00000513243 CLEC10AQ8IUN9 316 aa21.2■□□□□ 0.98
DDR1-272ENST00000513243 SIAH1Q8IUQ4 282 aa21.2■□□□□ 0.98
DDR1-272ENST00000513243 ANKRD13CQ8N6S4 541 aa21.2■□□□□ 0.98
DDR1-272ENST00000513243 GNRH1P01148 92 aa21.19■□□□□ 0.98
DDR1-272ENST00000513243 SDSP20132 328 aa21.19■□□□□ 0.98
DDR1-272ENST00000513243 GCLCP48506 637 aaPredicted RBP21.19■□□□□ 0.98
DDR1-272ENST00000513243 IRX3P78415 501 aaPredicted RBP21.19■□□□□ 0.98
DDR1-272ENST00000513243 MCMDC2Q4G0Z9 681 aa21.19■□□□□ 0.98
DDR1-272ENST00000513243 VPS53Q5VIR6 699 aa21.19■□□□□ 0.98
DDR1-272ENST00000513243 P2RX7Q99572 595 aaKnown RBP21.19■□□□□ 0.98
DDR1-272ENST00000513243 NAPBQ9H115 298 aa21.19■□□□□ 0.98
DDR1-272ENST00000513243 FMNL1O95466 1100 aaPredicted RBP21.18■□□□□ 0.98
DDR1-272ENST00000513243 RASA1P20936 1047 aa21.18■□□□□ 0.98
DDR1-272ENST00000513243 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.18■□□□□ 0.98
DDR1-272ENST00000513243 MKNK2Q9HBH9 465 aa21.18■□□□□ 0.98
DDR1-272ENST00000513243 PTCH2Q9Y6C5 1203 aa21.18■□□□□ 0.98
DDR1-272ENST00000513243 MYH8P13535 1937 aa21.17■□□□□ 0.98
DDR1-272ENST00000513243 VCAM1P19320 739 aa21.17■□□□□ 0.98
DDR1-272ENST00000513243 FCGRTP55899 365 aa21.17■□□□□ 0.98
DDR1-272ENST00000513243 ICA1Q05084 483 aa21.17■□□□□ 0.98
DDR1-272ENST00000513243 FAM110CQ1W6H9 321 aa21.17■□□□□ 0.98
DDR1-272ENST00000513243 USP17L15C9J2P7 530 aa21.16■□□□□ 0.98
DDR1-272ENST00000513243 USP17L13C9JLJ4 530 aa21.16■□□□□ 0.98
DDR1-272ENST00000513243 USP17L11C9JVI0 530 aa21.16■□□□□ 0.98
DDR1-272ENST00000513243 USP17L18D6R9N7 530 aa21.16■□□□□ 0.98
DDR1-272ENST00000513243 USP17L22D6RA61 530 aa21.16■□□□□ 0.98
DDR1-272ENST00000513243 USP17L17D6RBQ6 530 aa21.16■□□□□ 0.98
DDR1-272ENST00000513243 USP17L19D6RCP7 530 aa21.16■□□□□ 0.98
DDR1-272ENST00000513243 USP17L20D6RJB6 530 aa21.16■□□□□ 0.98
DDR1-272ENST00000513243 HERVK_113P62684 666 aa21.16■□□□□ 0.98
DDR1-272ENST00000513243 PPARAQ07869 468 aa21.16■□□□□ 0.98
DDR1-272ENST00000513243 USP17L24Q0WX57 530 aa21.16■□□□□ 0.98
DDR1-272ENST00000513243 ZNF589Q86UQ0 364 aaPredicted RBP21.16■□□□□ 0.98
DDR1-272ENST00000513243 KANSL2Q9H9L4 492 aa21.16■□□□□ 0.98
DDR1-272ENST00000513243 SRRDQ9UH36 339 aa21.16■□□□□ 0.98
DDR1-272ENST00000513243 PEX10O60683 326 aa21.15■□□□□ 0.98
DDR1-272ENST00000513243 PRDM1O75626 825 aa21.15■□□□□ 0.98
DDR1-272ENST00000513243 EEF2P13639 858 aaKnown RBP21.15■□□□□ 0.98
DDR1-272ENST00000513243 PRMT2P55345 433 aa21.15■□□□□ 0.98
DDR1-272ENST00000513243 KIAA1755Q5JYT7 1200 aa21.15■□□□□ 0.98
DDR1-272ENST00000513243 POTEEQ6S8J3 1075 aa21.15■□□□□ 0.98
DDR1-272ENST00000513243 CATSPERGQ6ZRH7 1159 aa21.15■□□□□ 0.98
DDR1-272ENST00000513243 ARHGEF10LQ9HCE6 1279 aa21.15■□□□□ 0.98
DDR1-272ENST00000513243 TMX2Q9Y320 296 aa21.15■□□□□ 0.98
DDR1-272ENST00000513243 GSPT1P15170 499 aaKnown RBP21.14■□□□□ 0.97
DDR1-272ENST00000513243 HOXD10P28358 340 aa21.14■□□□□ 0.97
DDR1-272ENST00000513243 ALX1Q15699 326 aa21.14■□□□□ 0.97
DDR1-272ENST00000513243 TTC22Q5TAA0 569 aa21.14■□□□□ 0.97
DDR1-272ENST00000513243 RPAP3Q9H6T3 665 aaPredicted RBP21.14■□□□□ 0.97
DDR1-272ENST00000513243 ZNF287Q9HBT7 754 aa21.14■□□□□ 0.97
DDR1-272ENST00000513243 TXNRD2Q9NNW7 524 aa21.14■□□□□ 0.97
DDR1-272ENST00000513243 RBPJLQ9UBG7 517 aa21.14■□□□□ 0.97
DDR1-272ENST00000513243 MORF4L1Q9UBU8 362 aa21.14■□□□□ 0.97
DDR1-272ENST00000513243 CCDC171Q6TFL3 1326 aa21.13■□□□□ 0.97
DDR1-272ENST00000513243 HTTP42858 3142 aa21.13■□□□□ 0.97
DDR1-272ENST00000513243 SLC3A2P08195 630 aaKnown RBP21.13■□□□□ 0.97
DDR1-272ENST00000513243 HSPD1P10809 573 aaKnown RBP21.13■□□□□ 0.97
DDR1-272ENST00000513243 ATP2B2Q01814 1243 aa21.13■□□□□ 0.97
DDR1-272ENST00000513243 CWC27Q6UX04 472 aaKnown RBP21.13■□□□□ 0.97
DDR1-272ENST00000513243 ZNF444Q8N0Y2 327 aaPredicted RBP21.13■□□□□ 0.97
DDR1-272ENST00000513243 ARMC5Q96C12 935 aa21.13■□□□□ 0.97
DDR1-272ENST00000513243 SH2D4AQ9H788 454 aa21.13■□□□□ 0.97
DDR1-272ENST00000513243 DIAPH3Q9NSV4 1193 aa21.13■□□□□ 0.97
DDR1-272ENST00000513243 MYPNQ86TC9 1320 aa21.12■□□□□ 0.97
DDR1-272ENST00000513243 TNPO2O14787 897 aaKnown RBP21.12■□□□□ 0.97
DDR1-272ENST00000513243 FGAP02671 866 aa21.12■□□□□ 0.97
DDR1-272ENST00000513243 SOX10P56693 466 aa21.12■□□□□ 0.97
DDR1-272ENST00000513243 PRKCZQ05513 592 aa21.12■□□□□ 0.97
DDR1-272ENST00000513243 CTDSPL2Q05D32 466 aa21.12■□□□□ 0.97
DDR1-272ENST00000513243 PDE4BQ07343 736 aa21.12■□□□□ 0.97
DDR1-272ENST00000513243 LPAR1Q92633 364 aa21.12■□□□□ 0.97
DDR1-272ENST00000513243 VCPKMTQ9H867 229 aa21.12■□□□□ 0.97
DDR1-272ENST00000513243 GABRQQ9UN88 632 aa21.12■□□□□ 0.97
DDR1-272ENST00000513243 IGKV6D-41A0A0C4DH26 115 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms