RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, human

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDGFC-208	ENST00000512711	CEP131	Q9UPN4	1083 aa		4.27	□□□□□ -1.73
PDGFC-208	ENST00000512711	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	4.27	□□□□□ -1.73
PDGFC-208	ENST00000512711	DNAJC25-GNG10	A0A024R161	153 aa		4.26	□□□□□ -1.73
PDGFC-208	ENST00000512711	SORBS3	O60504	671 aa		4.26	□□□□□ -1.73
PDGFC-208	ENST00000512711	PLCG1	P19174	1290 aa		4.26	□□□□□ -1.73
PDGFC-208	ENST00000512711	GBP2	P32456	591 aa	Predicted RBP	4.26	□□□□□ -1.73
PDGFC-208	ENST00000512711	ERVFC1	P60507	584 aa		4.26	□□□□□ -1.73
PDGFC-208	ENST00000512711	LMNB2	Q03252	620 aa		4.26	□□□□□ -1.73
PDGFC-208	ENST00000512711	MESP2	Q0VG99	397 aa		4.26	□□□□□ -1.73
PDGFC-208	ENST00000512711	RALGPS1	Q5JS13	557 aa		4.26	□□□□□ -1.73
PDGFC-208	ENST00000512711	SPOCD1	Q6ZMY3	1216 aa		4.26	□□□□□ -1.73
PDGFC-208	ENST00000512711	TMEM40	Q8WWA1	233 aa		4.26	□□□□□ -1.73
PDGFC-208	ENST00000512711	GATAD2B	Q8WXI9	593 aa		4.26	□□□□□ -1.73
PDGFC-208	ENST00000512711	RHOV	Q96L33	236 aa		4.26	□□□□□ -1.73
PDGFC-208	ENST00000512711	TMEM74	Q96NL1	305 aa		4.26	□□□□□ -1.73
PDGFC-208	ENST00000512711	RLBP1	P12271	317 aa		4.25	□□□□□ -1.73
PDGFC-208	ENST00000512711	GART	P22102	1010 aa		4.25	□□□□□ -1.73
PDGFC-208	ENST00000512711	FBXL19	Q6PCT2	694 aa		4.25	□□□□□ -1.73
PDGFC-208	ENST00000512711	CCDC84	Q86UT8	332 aa	Predicted RBP	4.25	□□□□□ -1.73
PDGFC-208	ENST00000512711	ZSWIM9	Q86XI8	627 aa		4.25	□□□□□ -1.73
PDGFC-208	ENST00000512711	RELL1	Q8IUW5	271 aa		4.25	□□□□□ -1.73
PDGFC-208	ENST00000512711	GOLM1	Q8NBJ4	401 aa		4.25	□□□□□ -1.73
PDGFC-208	ENST00000512711	BAHD1	Q8TBE0	780 aa	Predicted RBP	4.25	□□□□□ -1.73
PDGFC-208	ENST00000512711	RSRP1	Q9BUV0	290 aa		4.25	□□□□□ -1.73
PDGFC-208	ENST00000512711	ADAMTS10	Q9H324	1103 aa		4.25	□□□□□ -1.73
PDGFC-208	ENST00000512711	VTI1B	Q9UEU0	232 aa		4.25	□□□□□ -1.73
PDGFC-208	ENST00000512711	LRRC10B	A6NIK2	292 aa		4.24	□□□□□ -1.73
PDGFC-208	ENST00000512711	KRTAP9-7	A8MTY7	169 aa		4.24	□□□□□ -1.73
PDGFC-208	ENST00000512711	TLR3	O15455	904 aa	Known RBP	4.24	□□□□□ -1.73
PDGFC-208	ENST00000512711	CYP7A1	P22680	504 aa		4.24	□□□□□ -1.73
PDGFC-208	ENST00000512711	GDNF	P39905	211 aa		4.24	□□□□□ -1.73
PDGFC-208	ENST00000512711	PDE4B	Q07343	736 aa		4.24	□□□□□ -1.73
PDGFC-208	ENST00000512711	KCNMB1	Q16558	191 aa		4.24	□□□□□ -1.73
PDGFC-208	ENST00000512711	MLANA	Q16655	118 aa		4.24	□□□□□ -1.73
PDGFC-208	ENST00000512711	CCDC27	Q2M243	656 aa		4.24	□□□□□ -1.73
PDGFC-208	ENST00000512711	TMEM201	Q5SNT2	666 aa		4.24	□□□□□ -1.73
PDGFC-208	ENST00000512711	PRR23B	Q6ZRT6	265 aa		4.24	□□□□□ -1.73
PDGFC-208	ENST00000512711	FAM13C	Q8NE31	585 aa		4.24	□□□□□ -1.73
PDGFC-208	ENST00000512711	CRELD1	Q96HD1	420 aa		4.24	□□□□□ -1.73
PDGFC-208	ENST00000512711	KBTBD4	Q9NVX7	518 aa		4.24	□□□□□ -1.73
PDGFC-208	ENST00000512711	REV1	Q9UBZ9	1251 aa		4.24	□□□□□ -1.73
PDGFC-208	ENST00000512711	ADAM30	Q9UKF2	790 aa		4.24	□□□□□ -1.73
PDGFC-208	ENST00000512711	PRR36	Q9H6K5	1346 aa		4.23	□□□□□ -1.73
PDGFC-208	ENST00000512711	FARP2	O94887	1054 aa	Predicted RBP	4.23	□□□□□ -1.73
PDGFC-208	ENST00000512711	HTR3B	O95264	441 aa		4.23	□□□□□ -1.73
PDGFC-208	ENST00000512711	SRF	P11831	508 aa		4.23	□□□□□ -1.73
PDGFC-208	ENST00000512711	TPP2	P29144	1249 aa	Predicted RBP	4.23	□□□□□ -1.73
PDGFC-208	ENST00000512711	TRHR	P34981	398 aa	Predicted RBP	4.23	□□□□□ -1.73
PDGFC-208	ENST00000512711	KIR3DL1	P43629	444 aa		4.23	□□□□□ -1.73
PDGFC-208	ENST00000512711	AFM	P43652	599 aa		4.23	□□□□□ -1.73
PDGFC-208	ENST00000512711	GAB4	Q2WGN9	574 aa		4.23	□□□□□ -1.73
PDGFC-208	ENST00000512711	LDLRAD1	Q5T700	205 aa		4.23	□□□□□ -1.73
PDGFC-208	ENST00000512711	ZNF746	Q6NUN9	644 aa	Predicted RBP	4.23	□□□□□ -1.73
PDGFC-208	ENST00000512711	THAP5	Q7Z6K1	395 aa		4.23	□□□□□ -1.73
PDGFC-208	ENST00000512711	TTC6	Q86TZ1	520 aa		4.23	□□□□□ -1.73
PDGFC-208	ENST00000512711	CREG2	Q8IUH2	290 aa		4.23	□□□□□ -1.73
PDGFC-208	ENST00000512711	VWCE	Q96DN2	955 aa		4.23	□□□□□ -1.73
PDGFC-208	ENST00000512711	KIRREL1	Q96J84	757 aa		4.23	□□□□□ -1.73
PDGFC-208	ENST00000512711	ALPK1	Q96QP1	1244 aa		4.23	□□□□□ -1.73
PDGFC-208	ENST00000512711	SP110	Q9HB58	689 aa		4.23	□□□□□ -1.73
PDGFC-208	ENST00000512711	SLAMF8	Q9P0V8	285 aa		4.23	□□□□□ -1.73
PDGFC-208	ENST00000512711	EBF1	Q9UH73	591 aa		4.23	□□□□□ -1.73
PDGFC-208	ENST00000512711	KLHL3	Q9UH77	587 aa		4.23	□□□□□ -1.73
PDGFC-208	ENST00000512711	SHISA3	A0PJX4	238 aa		4.22	□□□□□ -1.73
PDGFC-208	ENST00000512711	GREM1	O60565	184 aa		4.22	□□□□□ -1.73
PDGFC-208	ENST00000512711	ETV3	P41162	512 aa		4.22	□□□□□ -1.73
PDGFC-208	ENST00000512711	CRK	P46108	304 aa		4.22	□□□□□ -1.73
PDGFC-208	ENST00000512711	HK2	P52789	917 aa		4.22	□□□□□ -1.73
PDGFC-208	ENST00000512711	ERMP1	Q7Z2K6	904 aa		4.22	□□□□□ -1.73
PDGFC-208	ENST00000512711	SLFN12	Q8IYM2	578 aa		4.22	□□□□□ -1.73
PDGFC-208	ENST00000512711	DTWD2	Q8NBA8	298 aa		4.22	□□□□□ -1.73
PDGFC-208	ENST00000512711	PIWIL2	Q8TC59	973 aa	Known RBP	4.22	□□□□□ -1.73
PDGFC-208	ENST00000512711	CYB5D2	Q8WUJ1	264 aa		4.22	□□□□□ -1.73
PDGFC-208	ENST00000512711	KIF2C	Q99661	725 aa		4.22	□□□□□ -1.73
PDGFC-208	ENST00000512711	KRTAP4-5	Q9BYR2	181 aa		4.22	□□□□□ -1.73
PDGFC-208	ENST00000512711	C19orf44	Q9H6X5	657 aa		4.22	□□□□□ -1.73
PDGFC-208	ENST00000512711	MRS2	Q9HD23	443 aa		4.22	□□□□□ -1.73
PDGFC-208	ENST00000512711	SLC22A31	A6NKX4	558 aa		4.21	□□□□□ -1.74
PDGFC-208	ENST00000512711	BPNT1	O95861	308 aa		4.21	□□□□□ -1.74
PDGFC-208	ENST00000512711	KRT1	P04264	644 aa		4.21	□□□□□ -1.74
PDGFC-208	ENST00000512711	GLI1	P08151	1106 aa		4.21	□□□□□ -1.74
PDGFC-208	ENST00000512711	TMEM67	Q5HYA8	995 aa		4.21	□□□□□ -1.74
PDGFC-208	ENST00000512711	SNAP47	Q5SQN1	464 aa		4.21	□□□□□ -1.74
PDGFC-208	ENST00000512711	FAM196A	Q6ZSG2	479 aa		4.21	□□□□□ -1.74
PDGFC-208	ENST00000512711	REC114	Q7Z4M0	266 aa		4.21	□□□□□ -1.74
PDGFC-208	ENST00000512711	CILP2	Q8IUL8	1156 aa		4.21	□□□□□ -1.74
PDGFC-208	ENST00000512711	ZNF296	Q8WUU4	475 aa	Predicted RBP	4.21	□□□□□ -1.74
PDGFC-208	ENST00000512711	KREMEN1	Q96MU8	473 aa		4.21	□□□□□ -1.74
PDGFC-208	ENST00000512711	GPR62	Q9BZJ7	368 aa		4.21	□□□□□ -1.74
PDGFC-208	ENST00000512711	BRMS1	Q9HCU9	246 aa		4.21	□□□□□ -1.74
PDGFC-208	ENST00000512711	UBOX5	O94941	541 aa		4.2	□□□□□ -1.74
PDGFC-208	ENST00000512711	POLR2B	P30876	1174 aa	Known RBP	4.2	□□□□□ -1.74
PDGFC-208	ENST00000512711	EIF4A3	P38919	411 aa	Known RBP	4.2	□□□□□ -1.74
PDGFC-208	ENST00000512711	TNNI2	P48788	182 aa		4.2	□□□□□ -1.74
PDGFC-208	ENST00000512711	YARS	P54577	528 aa	Known RBP	4.2	□□□□□ -1.74
PDGFC-208	ENST00000512711	MRPL58	Q14197	206 aa	Known RBP	4.2	□□□□□ -1.74
PDGFC-208	ENST00000512711	TIGD5	Q53EQ6	642 aa		4.2	□□□□□ -1.74
PDGFC-208	ENST00000512711	TMPRSS7	Q7RTY8	843 aa		4.2	□□□□□ -1.74
PDGFC-208	ENST00000512711	TSPYL5	Q86VY4	417 aa	Predicted RBP	4.2	□□□□□ -1.74
PDGFC-208	ENST00000512711	KSR1	Q8IVT5	923 aa		4.2	□□□□□ -1.74

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