RNA–Protein interactions for RNA: ENST00000512665.5

NEDD9-213, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-213ENST00000512665 CACNA1FO60840 1977 aa12.33□□□□□ -0.44
NEDD9-213ENST00000512665 DCDC2CA8MYV0 355 aa12.33□□□□□ -0.44
NEDD9-213ENST00000512665 IFIT1P09914 478 aaKnown RBP12.33□□□□□ -0.44
NEDD9-213ENST00000512665 ALADP13716 330 aa12.33□□□□□ -0.44
NEDD9-213ENST00000512665 FKBP5Q13451 457 aaPredicted RBP12.33□□□□□ -0.44
NEDD9-213ENST00000512665 SKIV2LQ15477 1246 aaKnown RBP12.33□□□□□ -0.44
NEDD9-213ENST00000512665 METTL24Q5JXM2 366 aa12.33□□□□□ -0.44
NEDD9-213ENST00000512665 PAGR1Q9BTK6 254 aa12.33□□□□□ -0.44
NEDD9-213ENST00000512665 MTIF3Q9H2K0 278 aaKnown RBP12.33□□□□□ -0.44
NEDD9-213ENST00000512665 NKX2-4Q9H2Z4 354 aa12.33□□□□□ -0.44
NEDD9-213ENST00000512665 YBX2Q9Y2T7 364 aaKnown RBP12.33□□□□□ -0.44
NEDD9-213ENST00000512665 MTCH2Q9Y6C9 303 aa12.33□□□□□ -0.44
NEDD9-213ENST00000512665 ZNF318Q5VUA4 2279 aa12.33□□□□□ -0.44
NEDD9-213ENST00000512665 C5orf42Q9H799 3197 aa12.32□□□□□ -0.44
NEDD9-213ENST00000512665 A0A1W2PQ45 241 aaPredicted RBP12.32□□□□□ -0.44
NEDD9-213ENST00000512665 A0A1W2PQY0 241 aa12.32□□□□□ -0.44
NEDD9-213ENST00000512665 CNMDO75829 334 aa12.32□□□□□ -0.44
NEDD9-213ENST00000512665 ASNSP08243 561 aa12.32□□□□□ -0.44
NEDD9-213ENST00000512665 FAM47AQ5JRC9 791 aa12.32□□□□□ -0.44
NEDD9-213ENST00000512665 BEND3Q5T5X7 828 aa12.32□□□□□ -0.44
NEDD9-213ENST00000512665 LBX2Q6XYB7 198 aa12.32□□□□□ -0.44
NEDD9-213ENST00000512665 MICALL1Q8N3F8 863 aa12.32□□□□□ -0.44
NEDD9-213ENST00000512665 HLA-CQ95604 372 aa12.32□□□□□ -0.44
NEDD9-213ENST00000512665 CD320Q9NPF0 282 aa12.32□□□□□ -0.44
NEDD9-213ENST00000512665 GINM1Q9NU53 330 aa12.32□□□□□ -0.44
NEDD9-213ENST00000512665 NRBP1Q9UHY1 535 aa12.32□□□□□ -0.44
NEDD9-213ENST00000512665 HERC5Q9UII4 1024 aaKnown RBP12.32□□□□□ -0.44
NEDD9-213ENST00000512665 MYH2Q9UKX2 1941 aa12.32□□□□□ -0.44
NEDD9-213ENST00000512665 GBF1Q92538 1859 aa12.31□□□□□ -0.44
NEDD9-213ENST00000512665 PRRC2BQ5JSZ5 2229 aaKnown RBP12.31□□□□□ -0.44
NEDD9-213ENST00000512665 GTPBP6O43824 516 aaPredicted RBP12.31□□□□□ -0.44
NEDD9-213ENST00000512665 MAP4K4O95819 1239 aaPredicted RBP12.31□□□□□ -0.44
NEDD9-213ENST00000512665 RRP1BQ14684 758 aaKnown RBP12.31□□□□□ -0.44
NEDD9-213ENST00000512665 PPP2R2DQ66LE6 453 aa12.31□□□□□ -0.44
NEDD9-213ENST00000512665 RNF180Q86T96 592 aa12.31□□□□□ -0.44
NEDD9-213ENST00000512665 SLF2Q8IX21 1173 aa12.31□□□□□ -0.44
NEDD9-213ENST00000512665 PIAS4Q8N2W9 510 aaPredicted RBP12.31□□□□□ -0.44
NEDD9-213ENST00000512665 TMEM199Q8N511 208 aa12.31□□□□□ -0.44
NEDD9-213ENST00000512665 MROH7Q68CQ1 1323 aa12.31□□□□□ -0.44
NEDD9-213ENST00000512665 FAM196BA6NMK8 535 aa12.3□□□□□ -0.44
NEDD9-213ENST00000512665 USP17L10C9JJH3 530 aa12.3□□□□□ -0.44
NEDD9-213ENST00000512665 SEMA3EO15041 775 aa12.3□□□□□ -0.44
NEDD9-213ENST00000512665 CSPP1Q1MSJ5 1256 aa12.3□□□□□ -0.44
NEDD9-213ENST00000512665 ZNF365Q70YC5 407 aa12.3□□□□□ -0.44
NEDD9-213ENST00000512665 ZGPATQ8N5A5 531 aaKnown RBP12.3□□□□□ -0.44
NEDD9-213ENST00000512665 TSEN34Q9BSV6 310 aaKnown RBP12.3□□□□□ -0.44
NEDD9-213ENST00000512665 XPNPEP3Q9NQH7 507 aa12.3□□□□□ -0.44
NEDD9-213ENST00000512665 PCDHA11Q9Y5I1 949 aa12.3□□□□□ -0.44
NEDD9-213ENST00000512665 A0A0G2JMZ2 1700 aa12.3□□□□□ -0.44
NEDD9-213ENST00000512665 STRNO43815 780 aa12.29□□□□□ -0.44
NEDD9-213ENST00000512665 MYCNP04198 464 aaPredicted RBP12.29□□□□□ -0.44
NEDD9-213ENST00000512665 CSF2RAP15509 400 aa12.29□□□□□ -0.44
NEDD9-213ENST00000512665 PICALMQ13492 652 aa12.29□□□□□ -0.44
NEDD9-213ENST00000512665 RABL6Q3YEC7 729 aaPredicted RBP12.29□□□□□ -0.44
NEDD9-213ENST00000512665 LRRC24Q50LG9 513 aa12.29□□□□□ -0.44
NEDD9-213ENST00000512665 ANO1Q5XXA6 986 aa12.29□□□□□ -0.44
NEDD9-213ENST00000512665 LPIN2Q92539 896 aa12.29□□□□□ -0.44
NEDD9-213ENST00000512665 KAZALD1Q96I82 304 aa12.29□□□□□ -0.44
NEDD9-213ENST00000512665 C12orf42Q96LP6 360 aa12.29□□□□□ -0.44
NEDD9-213ENST00000512665 RARBP10826 455 aa12.28□□□□□ -0.44
NEDD9-213ENST00000512665 RHBDL3P58872 404 aa12.28□□□□□ -0.44
NEDD9-213ENST00000512665 TWISTNBQ3B726 338 aaPredicted RBP12.28□□□□□ -0.44
NEDD9-213ENST00000512665 WDR78Q5VTH9 848 aa12.28□□□□□ -0.44
NEDD9-213ENST00000512665 GJD3Q8N144 294 aa12.28□□□□□ -0.44
NEDD9-213ENST00000512665 NUP133Q8WUM0 1156 aa12.28□□□□□ -0.44
NEDD9-213ENST00000512665 UIMC1Q96RL1 719 aa12.28□□□□□ -0.44
NEDD9-213ENST00000512665 IL23AQ9NPF7 189 aa12.28□□□□□ -0.44
NEDD9-213ENST00000512665 NDUFB9Q9Y6M9 179 aa12.28□□□□□ -0.44
NEDD9-213ENST00000512665 PDS5AQ29RF7 1337 aaKnown RBP12.28□□□□□ -0.44
NEDD9-213ENST00000512665 GPR75-ASB3A0A0A6YYF3 556 aa12.27□□□□□ -0.45
NEDD9-213ENST00000512665 MOXD2PA6NHM9 499 aa12.27□□□□□ -0.45
NEDD9-213ENST00000512665 ADORA2AP29274 412 aa12.27□□□□□ -0.45
NEDD9-213ENST00000512665 BTDP43251 543 aa12.27□□□□□ -0.45
NEDD9-213ENST00000512665 USP17L2Q6R6M4 530 aa12.27□□□□□ -0.45
NEDD9-213ENST00000512665 DPP9Q86TI2 863 aa12.27□□□□□ -0.45
NEDD9-213ENST00000512665 FAM178BQ8IXR5 827 aa12.27□□□□□ -0.45
NEDD9-213ENST00000512665 STARD7Q9NQZ5 370 aa12.27□□□□□ -0.45
NEDD9-213ENST00000512665 EMILIN3Q9NT22 766 aa12.27□□□□□ -0.45
NEDD9-213ENST00000512665 GNL3LQ9NVN8 582 aaKnown RBP12.27□□□□□ -0.45
NEDD9-213ENST00000512665 SLC5A4Q9NY91 659 aa12.27□□□□□ -0.45
NEDD9-213ENST00000512665 DENND2AQ9ULE3 1009 aa12.27□□□□□ -0.45
NEDD9-213ENST00000512665 MROH7-TTC4A0A0A0MT08 1334 aa12.27□□□□□ -0.45
NEDD9-213ENST00000512665 SPTBN4Q9H254 2564 aa12.26□□□□□ -0.45
NEDD9-213ENST00000512665 USP17L15C9J2P7 530 aa12.26□□□□□ -0.45
NEDD9-213ENST00000512665 USP17L13C9JLJ4 530 aa12.26□□□□□ -0.45
NEDD9-213ENST00000512665 USP17L11C9JVI0 530 aa12.26□□□□□ -0.45
NEDD9-213ENST00000512665 USP17L18D6R9N7 530 aa12.26□□□□□ -0.45
NEDD9-213ENST00000512665 USP17L22D6RA61 530 aa12.26□□□□□ -0.45
NEDD9-213ENST00000512665 USP17L17D6RBQ6 530 aa12.26□□□□□ -0.45
NEDD9-213ENST00000512665 USP17L19D6RCP7 530 aa12.26□□□□□ -0.45
NEDD9-213ENST00000512665 USP17L20D6RJB6 530 aa12.26□□□□□ -0.45
NEDD9-213ENST00000512665 ALDH1L1O75891 902 aa12.26□□□□□ -0.45
NEDD9-213ENST00000512665 USP17L24Q0WX57 530 aa12.26□□□□□ -0.45
NEDD9-213ENST00000512665 RALBP1Q15311 655 aa12.26□□□□□ -0.45
NEDD9-213ENST00000512665 METTL16Q86W50 562 aaKnown RBP12.26□□□□□ -0.45
NEDD9-213ENST00000512665 DZIP1Q86YF9 867 aaKnown RBP12.26□□□□□ -0.45
NEDD9-213ENST00000512665 ABRAQ8N0Z2 381 aa12.26□□□□□ -0.45
NEDD9-213ENST00000512665 C9orf78Q9NZ63 289 aaPredicted RBP12.26□□□□□ -0.45
NEDD9-213ENST00000512665 ELP1O95163 1332 aa12.26□□□□□ -0.45
NEDD9-213ENST00000512665 SIPA1L1O43166 1804 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms