RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 MAFGO15525 162 aa9.87□□□□□ -0.83
VCAN-208ENST00000512590 PPARGP37231 505 aaPredicted RBP9.87□□□□□ -0.83
VCAN-208ENST00000512590 MYSM1Q5VVJ2 828 aa9.87□□□□□ -0.83
VCAN-208ENST00000512590 TTC23LQ6PF05 361 aa9.87□□□□□ -0.83
VCAN-208ENST00000512590 DCLK2Q8N568 766 aa9.87□□□□□ -0.83
VCAN-208ENST00000512590 ZC3H15Q8WU90 426 aaKnown RBP9.87□□□□□ -0.83
VCAN-208ENST00000512590 SCAND2PQ9GZW5 306 aaPredicted RBP9.87□□□□□ -0.83
VCAN-208ENST00000512590 PDZRN3Q9UPQ7 1066 aa9.87□□□□□ -0.83
VCAN-208ENST00000512590 ZNF233A6NK53 670 aa9.86□□□□□ -0.83
VCAN-208ENST00000512590 CCDC85CA6NKD9 419 aa9.86□□□□□ -0.83
VCAN-208ENST00000512590 STAM2O75886 525 aa9.86□□□□□ -0.83
VCAN-208ENST00000512590 NXNQ6DKJ4 435 aa9.86□□□□□ -0.83
VCAN-208ENST00000512590 ANKS4BQ8N8V4 417 aa9.86□□□□□ -0.83
VCAN-208ENST00000512590 ALG1Q9BT22 464 aa9.86□□□□□ -0.83
VCAN-208ENST00000512590 IL16Q14005 1332 aa9.86□□□□□ -0.83
VCAN-208ENST00000512590 CIITAP33076 1130 aa9.86□□□□□ -0.83
VCAN-208ENST00000512590 IRX4P78413 519 aa9.86□□□□□ -0.83
VCAN-208ENST00000512590 PLIN2Q99541 437 aa9.86□□□□□ -0.83
VCAN-208ENST00000512590 GNAT1P11488 350 aa9.86□□□□□ -0.83
VCAN-208ENST00000512590 SOX5P35711 763 aa9.86□□□□□ -0.83
VCAN-208ENST00000512590 TNNC1P63316 161 aa9.86□□□□□ -0.83
VCAN-208ENST00000512590 DTHD1Q6ZMT9 781 aa9.86□□□□□ -0.83
VCAN-208ENST00000512590 MYCT1Q8N699 235 aa9.86□□□□□ -0.83
VCAN-208ENST00000512590 WDR66Q8TBY9 1149 aa9.86□□□□□ -0.83
VCAN-208ENST00000512590 STMN2Q93045 179 aa9.86□□□□□ -0.83
VCAN-208ENST00000512590 NACC1Q96RE7 527 aa9.86□□□□□ -0.83
VCAN-208ENST00000512590 MIS12Q9H081 205 aa9.86□□□□□ -0.83
VCAN-208ENST00000512590 VCXQ9H320 206 aa9.86□□□□□ -0.83
VCAN-208ENST00000512590 USP40Q9NVE5 1235 aa9.86□□□□□ -0.83
VCAN-208ENST00000512590 SAT1P21673 171 aa9.86□□□□□ -0.83
VCAN-208ENST00000512590 LETM2Q2VYF4 491 aa9.86□□□□□ -0.83
VCAN-208ENST00000512590 ACCSLQ4AC99 568 aa9.86□□□□□ -0.83
VCAN-208ENST00000512590 GKAP1Q5VSY0 366 aaPredicted RBP9.86□□□□□ -0.83
VCAN-208ENST00000512590 GBP6Q6ZN66 633 aa9.86□□□□□ -0.83
VCAN-208ENST00000512590 ZNF212Q9UDV6 495 aa9.86□□□□□ -0.83
VCAN-208ENST00000512590 EPRSP07814 1512 aaKnown RBP9.86□□□□□ -0.83
VCAN-208ENST00000512590 ERFEQ4G0M1 354 aa9.86□□□□□ -0.83
VCAN-208ENST00000512590 ABHD8Q96I13 439 aa9.86□□□□□ -0.83
VCAN-208ENST00000512590 OXCT2Q9BYC2 517 aaPredicted RBP9.86□□□□□ -0.83
VCAN-208ENST00000512590 NKIRAS1Q9NYS0 192 aa9.86□□□□□ -0.83
VCAN-208ENST00000512590 GRIN3BO60391 1043 aa9.85□□□□□ -0.83
VCAN-208ENST00000512590 TSPY1Q01534 308 aa9.85□□□□□ -0.83
VCAN-208ENST00000512590 PTPN14Q15678 1187 aa9.85□□□□□ -0.83
VCAN-208ENST00000512590 HP1BP3Q5SSJ5 553 aaPredicted RBP9.85□□□□□ -0.83
VCAN-208ENST00000512590 TMTC1Q8IUR5 882 aa9.85□□□□□ -0.83
VCAN-208ENST00000512590 CNGA4Q8IV77 575 aa9.85□□□□□ -0.83
VCAN-208ENST00000512590 THEM5Q8N1Q8 247 aa9.85□□□□□ -0.83
VCAN-208ENST00000512590 RNF181Q9P0P0 153 aa9.85□□□□□ -0.83
VCAN-208ENST00000512590 ADD3Q9UEY8 706 aaKnown RBP9.85□□□□□ -0.83
VCAN-208ENST00000512590 ACEP12821 1306 aa9.85□□□□□ -0.83
VCAN-208ENST00000512590 PCDH11XQ9BZA7 1347 aa9.85□□□□□ -0.83
VCAN-208ENST00000512590 PCDH11YQ9BZA8 1340 aa9.85□□□□□ -0.83
VCAN-208ENST00000512590 MYOM3Q5VTT5 1437 aa9.85□□□□□ -0.83
VCAN-208ENST00000512590 TMEM191BP0C7N4 346 aa9.85□□□□□ -0.83
VCAN-208ENST00000512590 NPR1P16066 1061 aa9.85□□□□□ -0.83
VCAN-208ENST00000512590 PTGS1P23219 599 aa9.85□□□□□ -0.83
VCAN-208ENST00000512590 SLC12A1Q13621 1099 aa9.85□□□□□ -0.83
VCAN-208ENST00000512590 PARP10Q53GL7 1025 aa9.85□□□□□ -0.83
VCAN-208ENST00000512590 SDCCAG3Q96C92 435 aa9.85□□□□□ -0.83
VCAN-208ENST00000512590 HAUS1Q96CS2 278 aa9.85□□□□□ -0.83
VCAN-208ENST00000512590 VCX3BQ9H321 246 aa9.85□□□□□ -0.83
VCAN-208ENST00000512590 ATP5DP30049 168 aa9.85□□□□□ -0.83
VCAN-208ENST00000512590 DSTYKQ6XUX3 929 aa9.85□□□□□ -0.83
VCAN-208ENST00000512590 TMC6Q7Z403 805 aa9.85□□□□□ -0.83
VCAN-208ENST00000512590 TSHZ2Q9NRE2 1034 aa9.85□□□□□ -0.83
VCAN-208ENST00000512590 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.85□□□□□ -0.83
VCAN-208ENST00000512590 ERICH4A6NGS2 130 aa9.85□□□□□ -0.83
VCAN-208ENST00000512590 I3L4J1 428 aa9.85□□□□□ -0.83
VCAN-208ENST00000512590 NDUFB5O43674 189 aa9.85□□□□□ -0.83
VCAN-208ENST00000512590 POLGP54098 1239 aaPredicted RBP9.85□□□□□ -0.83
VCAN-208ENST00000512590 USP14P54578 494 aa9.85□□□□□ -0.83
VCAN-208ENST00000512590 NBPF1Q3BBV0 1214 aa9.85□□□□□ -0.83
VCAN-208ENST00000512590 CCDC171Q6TFL3 1326 aa9.85□□□□□ -0.83
VCAN-208ENST00000512590 CCDC88BA6NC98 1476 aa9.85□□□□□ -0.83
VCAN-208ENST00000512590 RSPH10B2B2RC85 870 aa9.84□□□□□ -0.83
VCAN-208ENST00000512590 RSPH10BP0C881 870 aa9.84□□□□□ -0.83
VCAN-208ENST00000512590 CEP85LQ5SZL2 805 aa9.84□□□□□ -0.83
VCAN-208ENST00000512590 ANKS3Q6ZW76 656 aa9.84□□□□□ -0.83
VCAN-208ENST00000512590 CCDC24Q8N4L8 307 aa9.84□□□□□ -0.83
VCAN-208ENST00000512590 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.84□□□□□ -0.83
VCAN-208ENST00000512590 ANGPTL8Q6UXH0 198 aa9.84□□□□□ -0.83
VCAN-208ENST00000512590 MCUQ8NE86 351 aa9.84□□□□□ -0.83
VCAN-208ENST00000512590 FGD4Q96M96 766 aa9.84□□□□□ -0.83
VCAN-208ENST00000512590 HACD3Q9P035 362 aa9.84□□□□□ -0.83
VCAN-208ENST00000512590 K7ELQ4 463 aaPredicted RBP9.84□□□□□ -0.83
VCAN-208ENST00000512590 SPAG1Q07617 926 aa9.84□□□□□ -0.83
VCAN-208ENST00000512590 PHKG1Q16816 387 aa9.84□□□□□ -0.83
VCAN-208ENST00000512590 MEI1Q5TIA1 1274 aa9.84□□□□□ -0.83
VCAN-208ENST00000512590 XAGE3Q8WTP9 111 aa9.84□□□□□ -0.83
VCAN-208ENST00000512590 AKAP7Q9P0M2 348 aaPredicted RBP9.84□□□□□ -0.83
VCAN-208ENST00000512590 INPP5FQ9Y2H2 1132 aa9.84□□□□□ -0.83
VCAN-208ENST00000512590 TLDC2A0PJX2 215 aa9.84□□□□□ -0.83
VCAN-208ENST00000512590 TRIM37O94972 964 aa9.84□□□□□ -0.83
VCAN-208ENST00000512590 ACTN1P12814 892 aa9.84□□□□□ -0.83
VCAN-208ENST00000512590 TRIM14Q14142 442 aa9.84□□□□□ -0.83
VCAN-208ENST00000512590 HAUS6Q7Z4H7 955 aa9.84□□□□□ -0.83
VCAN-208ENST00000512590 CHD1LQ86WJ1 897 aa9.84□□□□□ -0.83
VCAN-208ENST00000512590 CCDC13Q8IYE1 715 aa9.84□□□□□ -0.83
VCAN-208ENST00000512590 TTF2Q9UNY4 1162 aaKnown RBP9.84□□□□□ -0.83
VCAN-208ENST00000512590 A6NJR5 290 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms