RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 NLRP3Q96P20 1036 aa10.56□□□□□ -0.72
CPNE4-210ENST00000512332 CRNKL1Q9BZJ0 848 aaKnown RBP10.56□□□□□ -0.72
CPNE4-210ENST00000512332 CSRNP2Q9H175 543 aa10.56□□□□□ -0.72
CPNE4-210ENST00000512332 DCP1AQ9NPI6 582 aaPredicted RBP10.56□□□□□ -0.72
CPNE4-210ENST00000512332 V9GY48 417 aaPredicted RBP10.56□□□□□ -0.72
CPNE4-210ENST00000512332 MYH6P13533 1939 aa10.56□□□□□ -0.72
CPNE4-210ENST00000512332 WTIPA6NIX2 430 aaPredicted RBP10.56□□□□□ -0.72
CPNE4-210ENST00000512332 RPS6KA4O75676 772 aa10.56□□□□□ -0.72
CPNE4-210ENST00000512332 TOP1P11387 765 aaKnown RBP10.56□□□□□ -0.72
CPNE4-210ENST00000512332 GTF2E1P29083 439 aaPredicted RBP10.56□□□□□ -0.72
CPNE4-210ENST00000512332 HIBADHP31937 336 aaKnown RBP10.56□□□□□ -0.72
CPNE4-210ENST00000512332 MECOMQ03112 1051 aa10.56□□□□□ -0.72
CPNE4-210ENST00000512332 TBX2Q13207 712 aaPredicted RBP10.56□□□□□ -0.72
CPNE4-210ENST00000512332 TBC1D9BQ66K14 1250 aa10.56□□□□□ -0.72
CPNE4-210ENST00000512332 NUTM2AQ8IVF1 878 aaPredicted RBP10.56□□□□□ -0.72
CPNE4-210ENST00000512332 VPS54Q9P1Q0 977 aa10.56□□□□□ -0.72
CPNE4-210ENST00000512332 ARPP21Q9UBL0 812 aaPredicted RBP10.56□□□□□ -0.72
CPNE4-210ENST00000512332 MYH2Q9UKX2 1941 aa10.56□□□□□ -0.72
CPNE4-210ENST00000512332 PRKCSHP14314 528 aaPredicted RBP10.55□□□□□ -0.72
CPNE4-210ENST00000512332 NPY5RQ15761 445 aa10.55□□□□□ -0.72
CPNE4-210ENST00000512332 SMAP1Q8IYB5 467 aaPredicted RBP10.55□□□□□ -0.72
CPNE4-210ENST00000512332 GSDMAQ96QA5 445 aa10.55□□□□□ -0.72
CPNE4-210ENST00000512332 SETDB2Q96T68 719 aa10.55□□□□□ -0.72
CPNE4-210ENST00000512332 PYM1Q9BRP8 204 aaKnown RBP10.55□□□□□ -0.72
CPNE4-210ENST00000512332 TAOK2Q9UL54 1235 aa10.55□□□□□ -0.72
CPNE4-210ENST00000512332 NFE2L3Q9Y4A8 694 aa10.55□□□□□ -0.72
CPNE4-210ENST00000512332 CYP2D7A0A087X1C5 515 aa10.54□□□□□ -0.72
CPNE4-210ENST00000512332 SMIM22K7EJ46 135 aa10.54□□□□□ -0.72
CPNE4-210ENST00000512332 ARHGAP6O43182 974 aa10.54□□□□□ -0.72
CPNE4-210ENST00000512332 SLU7O95391 586 aaKnown RBP10.54□□□□□ -0.72
CPNE4-210ENST00000512332 PLEKHA8P1O95397 391 aa10.54□□□□□ -0.72
CPNE4-210ENST00000512332 PRR29P0C7W0 189 aa10.54□□□□□ -0.72
CPNE4-210ENST00000512332 PLCD1P51178 756 aa10.54□□□□□ -0.72
CPNE4-210ENST00000512332 ETF1P62495 437 aaKnown RBP10.54□□□□□ -0.72
CPNE4-210ENST00000512332 CCDC93Q567U6 631 aa10.54□□□□□ -0.72
CPNE4-210ENST00000512332 SPTY2D1Q68D10 685 aaPredicted RBP10.54□□□□□ -0.72
CPNE4-210ENST00000512332 TPTE2Q6XPS3 522 aa10.54□□□□□ -0.72
CPNE4-210ENST00000512332 CTCFLQ8NI51 663 aaPredicted RBP10.54□□□□□ -0.72
CPNE4-210ENST00000512332 INTS13Q9NVM9 706 aa10.54□□□□□ -0.72
CPNE4-210ENST00000512332 CNTNAP5Q8WYK1 1306 aa10.54□□□□□ -0.72
CPNE4-210ENST00000512332 BAZ2AQ9UIF9 1905 aaKnown RBP10.54□□□□□ -0.72
CPNE4-210ENST00000512332 FMR1Q06787 632 aaKnown RBP eCLIP10.54□□□□□ -0.72
CPNE4-210ENST00000512332 USP49Q70CQ1 688 aa10.54□□□□□ -0.72
CPNE4-210ENST00000512332 ANKS1AQ92625 1134 aa10.54□□□□□ -0.72
CPNE4-210ENST00000512332 ZNF215Q9UL58 517 aaPredicted RBP10.54□□□□□ -0.72
CPNE4-210ENST00000512332 PHLPP2Q6ZVD8 1323 aa10.54□□□□□ -0.72
CPNE4-210ENST00000512332 CASZ1Q86V15 1759 aa10.54□□□□□ -0.72
CPNE4-210ENST00000512332 COL24A1Q17RW2 1714 aa10.53□□□□□ -0.72
CPNE4-210ENST00000512332 TAF1P21675 1872 aa10.53□□□□□ -0.72
CPNE4-210ENST00000512332 ZSCAN12O43309 604 aa10.53□□□□□ -0.72
CPNE4-210ENST00000512332 STX10O60499 249 aa10.53□□□□□ -0.72
CPNE4-210ENST00000512332 ATP2C1P98194 919 aaPredicted RBP10.53□□□□□ -0.72
CPNE4-210ENST00000512332 PFKFB3Q16875 520 aaPredicted RBP10.53□□□□□ -0.72
CPNE4-210ENST00000512332 EARS2Q5JPH6 523 aaKnown RBP10.53□□□□□ -0.72
CPNE4-210ENST00000512332 SPECC1LQ69YQ0 1117 aa10.53□□□□□ -0.72
CPNE4-210ENST00000512332 NBPF5PQ86XG9 351 aaPredicted RBP10.53□□□□□ -0.72
CPNE4-210ENST00000512332 DGKHQ86XP1 1220 aa10.53□□□□□ -0.72
CPNE4-210ENST00000512332 TMEM139Q8IV31 216 aa10.53□□□□□ -0.72
CPNE4-210ENST00000512332 SRBD1Q8N5C6 995 aaKnown RBP10.53□□□□□ -0.72
CPNE4-210ENST00000512332 PAGE5Q96GU1 130 aa10.53□□□□□ -0.72
CPNE4-210ENST00000512332 IRS2Q9Y4H2 1338 aa10.53□□□□□ -0.72
CPNE4-210ENST00000512332 GOLGA6L9A6NEM1 432 aa10.53□□□□□ -0.72
CPNE4-210ENST00000512332 PRDM1O75626 825 aa10.53□□□□□ -0.72
CPNE4-210ENST00000512332 SCG2P13521 617 aa10.53□□□□□ -0.72
CPNE4-210ENST00000512332 ATP2B1P20020 1258 aa10.53□□□□□ -0.72
CPNE4-210ENST00000512332 CDK11BP21127 795 aaKnown RBP10.53□□□□□ -0.72
CPNE4-210ENST00000512332 TM4SF1P30408 202 aa10.53□□□□□ -0.72
CPNE4-210ENST00000512332 KIF5BP33176 963 aa10.53□□□□□ -0.72
CPNE4-210ENST00000512332 NR1I3Q14994 352 aa10.53□□□□□ -0.72
CPNE4-210ENST00000512332 CCDC178Q5BJE1 867 aa10.53□□□□□ -0.72
CPNE4-210ENST00000512332 TTC38Q5R3I4 469 aa10.53□□□□□ -0.72
CPNE4-210ENST00000512332 SPATA1Q5VX52 437 aa10.53□□□□□ -0.72
CPNE4-210ENST00000512332 FAM177A1Q8N128 213 aaPredicted RBP10.53□□□□□ -0.72
CPNE4-210ENST00000512332 MED15Q96RN5 788 aa10.53□□□□□ -0.72
CPNE4-210ENST00000512332 SH3GLB2Q9NR46 395 aa10.53□□□□□ -0.72
CPNE4-210ENST00000512332 LTBP4Q8N2S1 1624 aa10.53□□□□□ -0.72
CPNE4-210ENST00000512332 A0A1B0GTH6 734 aa10.52□□□□□ -0.73
CPNE4-210ENST00000512332 FAM205CA6NFA0 338 aa10.52□□□□□ -0.73
CPNE4-210ENST00000512332 TMEM232C9JQI7 657 aa10.52□□□□□ -0.73
CPNE4-210ENST00000512332 KLRK1P26718 216 aa10.52□□□□□ -0.73
CPNE4-210ENST00000512332 CALML3P27482 149 aa10.52□□□□□ -0.73
CPNE4-210ENST00000512332 DPYDQ12882 1025 aa10.52□□□□□ -0.73
CPNE4-210ENST00000512332 VPS72Q15906 364 aa10.52□□□□□ -0.73
CPNE4-210ENST00000512332 ARL6IP4Q66PJ3 421 aaKnown RBP10.52□□□□□ -0.73
CPNE4-210ENST00000512332 MAST2Q6P0Q8 1798 aa10.52□□□□□ -0.73
CPNE4-210ENST00000512332 TRIM65Q6PJ69 517 aa10.52□□□□□ -0.73
CPNE4-210ENST00000512332 BICDL1Q6ZP65 573 aa10.52□□□□□ -0.73
CPNE4-210ENST00000512332 PDILTQ8N807 584 aa10.52□□□□□ -0.73
CPNE4-210ENST00000512332 SYMPKQ92797 1274 aaKnown RBP10.52□□□□□ -0.73
CPNE4-210ENST00000512332 EPSTI1Q96J88 318 aa10.52□□□□□ -0.73
CPNE4-210ENST00000512332 MKRN1Q9UHC7 482 aaKnown RBP10.52□□□□□ -0.73
CPNE4-210ENST00000512332 LAMB1P07942 1786 aa10.52□□□□□ -0.73
CPNE4-210ENST00000512332 A0A087X0B3 334 aa10.52□□□□□ -0.73
CPNE4-210ENST00000512332 ZPR1O75312 459 aa10.52□□□□□ -0.73
CPNE4-210ENST00000512332 CUL4BQ13620 913 aa10.52□□□□□ -0.73
CPNE4-210ENST00000512332 RCSD1Q6JBY9 416 aa10.52□□□□□ -0.73
CPNE4-210ENST00000512332 SYT10Q6XYQ8 523 aa10.52□□□□□ -0.73
CPNE4-210ENST00000512332 REXO1L1PQ8IX06 675 aa10.52□□□□□ -0.73
CPNE4-210ENST00000512332 TC2NQ8N9U0 490 aa10.52□□□□□ -0.73
CPNE4-210ENST00000512332 IQUBQ8NA54 791 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms