RNA–Protein interactions for RNA: ENST00000511708.1

COPS4-210, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 3

Gene COPS4, Length 824 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-210ENST00000511708 SHROOM1Q2M3G4 852 aaPredicted RBP14.9□□□□□ -0.02
COPS4-210ENST00000511708 SPTY2D1Q68D10 685 aaPredicted RBP14.9□□□□□ -0.02
COPS4-210ENST00000511708 CCDC102BQ68D86 513 aa14.9□□□□□ -0.02
COPS4-210ENST00000511708 NECAB3Q96P71 396 aaPredicted RBP14.9□□□□□ -0.02
COPS4-210ENST00000511708 LRFN3Q9BTN0 628 aa14.9□□□□□ -0.02
COPS4-210ENST00000511708 PRDM12Q9H4Q4 367 aa14.9□□□□□ -0.02
COPS4-210ENST00000511708 DNAJC18Q9H819 358 aa14.9□□□□□ -0.02
COPS4-210ENST00000511708 CWC22Q9HCG8 908 aaKnown RBP14.9□□□□□ -0.02
COPS4-210ENST00000511708 FBXO3Q9UK99 471 aa14.9□□□□□ -0.02
COPS4-210ENST00000511708 GBF1Q92538 1859 aa14.9□□□□□ -0.02
COPS4-210ENST00000511708 CIAO1O76071 339 aa14.89□□□□□ -0.03
COPS4-210ENST00000511708 BMP1P13497 986 aa14.89□□□□□ -0.03
COPS4-210ENST00000511708 ADORA1P30542 326 aa14.89□□□□□ -0.03
COPS4-210ENST00000511708 FPGSQ05932 587 aa14.89□□□□□ -0.03
COPS4-210ENST00000511708 ANO1Q5XXA6 986 aa14.89□□□□□ -0.03
COPS4-210ENST00000511708 OLFML2BQ68BL8 750 aa14.89□□□□□ -0.03
COPS4-210ENST00000511708 METTL16Q86W50 562 aaKnown RBP14.89□□□□□ -0.03
COPS4-210ENST00000511708 FERMT2Q96AC1 680 aa14.89□□□□□ -0.03
COPS4-210ENST00000511708 USP44Q9H0E7 712 aa14.89□□□□□ -0.03
COPS4-210ENST00000511708 GINM1Q9NU53 330 aa14.89□□□□□ -0.03
COPS4-210ENST00000511708 CEP126Q9P2H0 1117 aa14.89□□□□□ -0.03
COPS4-210ENST00000511708 PI4KBQ9UBF8 816 aa14.89□□□□□ -0.03
COPS4-210ENST00000511708 HCN4Q9Y3Q4 1203 aa14.89□□□□□ -0.03
COPS4-210ENST00000511708 RAG1P15918 1043 aa14.88□□□□□ -0.03
COPS4-210ENST00000511708 USP17L2Q6R6M4 530 aa14.88□□□□□ -0.03
COPS4-210ENST00000511708 LBX2Q6XYB7 198 aa14.88□□□□□ -0.03
COPS4-210ENST00000511708 IL27Q8NEV9 243 aa14.88□□□□□ -0.03
COPS4-210ENST00000511708 C12orf42Q96LP6 360 aa14.88□□□□□ -0.03
COPS4-210ENST00000511708 PBX4Q9BYU1 374 aa14.88□□□□□ -0.03
COPS4-210ENST00000511708 CXXC1Q9P0U4 656 aaPredicted RBP14.88□□□□□ -0.03
COPS4-210ENST00000511708 PHF24Q9UPV7 400 aa14.88□□□□□ -0.03
COPS4-210ENST00000511708 IVNS1ABPQ9Y6Y0 642 aa14.88□□□□□ -0.03
COPS4-210ENST00000511708 ZNFX1Q9P2E3 1918 aaKnown RBP14.88□□□□□ -0.03
COPS4-210ENST00000511708 PBX2P40425 430 aa14.87□□□□□ -0.03
COPS4-210ENST00000511708 RASIP1Q5U651 963 aa14.87□□□□□ -0.03
COPS4-210ENST00000511708 WDR78Q5VTH9 848 aa14.87□□□□□ -0.03
COPS4-210ENST00000511708 ERICH6Q7L0X2 663 aa14.87□□□□□ -0.03
COPS4-210ENST00000511708 WDR63Q8IWG1 891 aa14.87□□□□□ -0.03
COPS4-210ENST00000511708 BTBD7Q9P203 1132 aa14.87□□□□□ -0.03
COPS4-210ENST00000511708 ZBTB21Q9ULJ3 1066 aa14.87□□□□□ -0.03
COPS4-210ENST00000511708 USP17L15C9J2P7 530 aa14.86□□□□□ -0.03
COPS4-210ENST00000511708 USP17L13C9JLJ4 530 aa14.86□□□□□ -0.03
COPS4-210ENST00000511708 USP17L11C9JVI0 530 aa14.86□□□□□ -0.03
COPS4-210ENST00000511708 USP17L18D6R9N7 530 aa14.86□□□□□ -0.03
COPS4-210ENST00000511708 USP17L22D6RA61 530 aa14.86□□□□□ -0.03
COPS4-210ENST00000511708 USP17L17D6RBQ6 530 aa14.86□□□□□ -0.03
COPS4-210ENST00000511708 USP17L19D6RCP7 530 aa14.86□□□□□ -0.03
COPS4-210ENST00000511708 USP17L20D6RJB6 530 aa14.86□□□□□ -0.03
COPS4-210ENST00000511708 LDHCP07864 332 aa14.86□□□□□ -0.03
COPS4-210ENST00000511708 USP17L24Q0WX57 530 aa14.86□□□□□ -0.03
COPS4-210ENST00000511708 CCDC85BQ15834 202 aaPredicted RBP14.86□□□□□ -0.03
COPS4-210ENST00000511708 FAM47AQ5JRC9 791 aa14.86□□□□□ -0.03
COPS4-210ENST00000511708 NSUN4Q96CB9 384 aaKnown RBP14.86□□□□□ -0.03
COPS4-210ENST00000511708 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.86□□□□□ -0.03
COPS4-210ENST00000511708 SIL1Q9H173 461 aa14.86□□□□□ -0.03
COPS4-210ENST00000511708 DHX36Q9H2U1 1008 aaKnown RBP14.86□□□□□ -0.03
COPS4-210ENST00000511708 GDF11O95390 407 aa14.85□□□□□ -0.03
COPS4-210ENST00000511708 CATSPERGQ6ZRH7 1159 aa14.85□□□□□ -0.03
COPS4-210ENST00000511708 TEX11Q8IYF3 940 aa14.85□□□□□ -0.03
COPS4-210ENST00000511708 EPHX3Q9H6B9 360 aa14.85□□□□□ -0.03
COPS4-210ENST00000511708 A0A0G2JMZ2 1700 aa14.84□□□□□ -0.03
COPS4-210ENST00000511708 GRXCR1A8MXD5 290 aa14.84□□□□□ -0.03
COPS4-210ENST00000511708 MYCNP04198 464 aaPredicted RBP14.84□□□□□ -0.03
COPS4-210ENST00000511708 ADORA2AP29274 412 aa14.84□□□□□ -0.03
COPS4-210ENST00000511708 GSTO1P78417 241 aa14.84□□□□□ -0.03
COPS4-210ENST00000511708 FAAP100Q0VG06 881 aa14.84□□□□□ -0.03
COPS4-210ENST00000511708 C16orf59Q7L2K0 433 aa14.84□□□□□ -0.03
COPS4-210ENST00000511708 ANKRD33Q7Z3H0 272 aa14.84□□□□□ -0.03
COPS4-210ENST00000511708 FOXP4Q8IVH2 680 aaPredicted RBP14.84□□□□□ -0.03
COPS4-210ENST00000511708 TOX2Q96NM4 488 aa14.84□□□□□ -0.03
COPS4-210ENST00000511708 TMEM39AQ9NV64 488 aa14.84□□□□□ -0.03
COPS4-210ENST00000511708 PRRC2BQ5JSZ5 2229 aaKnown RBP14.84□□□□□ -0.03
COPS4-210ENST00000511708 SPDYE16A6NNV3 312 aaPredicted RBP14.83□□□□□ -0.04
COPS4-210ENST00000511708 STRNO43815 780 aa14.83□□□□□ -0.04
COPS4-210ENST00000511708 PQBP1O60828 265 aaKnown RBP14.83□□□□□ -0.04
COPS4-210ENST00000511708 COBLO75128 1261 aa14.83□□□□□ -0.04
COPS4-210ENST00000511708 IL15P40933 162 aaPredicted RBP14.83□□□□□ -0.04
COPS4-210ENST00000511708 TMEM240Q5SV17 173 aa14.83□□□□□ -0.04
COPS4-210ENST00000511708 PRAMEF19Q5SWL8 479 aa14.83□□□□□ -0.04
COPS4-210ENST00000511708 DPP9Q86TI2 863 aa14.83□□□□□ -0.04
COPS4-210ENST00000511708 SLC44A5Q8NCS7 719 aa14.83□□□□□ -0.04
COPS4-210ENST00000511708 SH3RF3Q8TEJ3 882 aaPredicted RBP14.83□□□□□ -0.04
COPS4-210ENST00000511708 A0A1W2PQ45 241 aaPredicted RBP14.82□□□□□ -0.04
COPS4-210ENST00000511708 A0A1W2PQY0 241 aa14.82□□□□□ -0.04
COPS4-210ENST00000511708 TIMP1P01033 207 aa14.82□□□□□ -0.04
COPS4-210ENST00000511708 IGFBP4P22692 258 aa14.82□□□□□ -0.04
COPS4-210ENST00000511708 TIMM10P62072 90 aa14.82□□□□□ -0.04
COPS4-210ENST00000511708 TFF2Q03403 129 aa14.82□□□□□ -0.04
COPS4-210ENST00000511708 TMEM31Q5JXX7 168 aa14.82□□□□□ -0.04
COPS4-210ENST00000511708 CCDC129Q6ZRS4 1044 aa14.82□□□□□ -0.04
COPS4-210ENST00000511708 C11orf16Q9NQ32 467 aa14.82□□□□□ -0.04
COPS4-210ENST00000511708 TBX21Q9UL17 535 aa14.82□□□□□ -0.04
COPS4-210ENST00000511708 MYH1P12882 1939 aa14.82□□□□□ -0.04
COPS4-210ENST00000511708 VCAM1P19320 739 aa14.81□□□□□ -0.04
COPS4-210ENST00000511708 KCNQ1P51787 676 aa14.81□□□□□ -0.04
COPS4-210ENST00000511708 MFSD5Q6N075 450 aa14.81□□□□□ -0.04
COPS4-210ENST00000511708 ALYREFQ86V81 257 aaKnown RBP14.81□□□□□ -0.04
COPS4-210ENST00000511708 MOV10L1Q9BXT6 1211 aaKnown RBP14.81□□□□□ -0.04
COPS4-210ENST00000511708 KIAA1683Q9H0B3 1180 aa14.81□□□□□ -0.04
COPS4-210ENST00000511708 TSPYL2Q9H2G4 693 aaPredicted RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms