RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 NELFCDQ8IXH7 590 aa11.75□□□□□ -0.53
NEK1-206ENST00000510533 JDP2Q8WYK2 163 aa11.75□□□□□ -0.53
NEK1-206ENST00000510533 AATFQ9NY61 560 aaKnown RBP eCLIP11.75□□□□□ -0.53
NEK1-206ENST00000510533 NDUFB9Q9Y6M9 179 aa11.75□□□□□ -0.53
NEK1-206ENST00000510533 KIF24Q5T7B8 1368 aa11.75□□□□□ -0.53
NEK1-206ENST00000510533 ZNF518AQ6AHZ1 1483 aa11.75□□□□□ -0.53
NEK1-206ENST00000510533 GCKRQ14397 625 aa11.75□□□□□ -0.53
NEK1-206ENST00000510533 KRT71Q3SY84 523 aa11.75□□□□□ -0.53
NEK1-206ENST00000510533 RRAGAQ7L523 313 aa11.75□□□□□ -0.53
NEK1-206ENST00000510533 STAMQ92783 540 aa11.75□□□□□ -0.53
NEK1-206ENST00000510533 TCOF1Q13428 1488 aaKnown RBP11.75□□□□□ -0.53
NEK1-206ENST00000510533 NBPF14Q5TI25 921 aa11.74□□□□□ -0.53
NEK1-206ENST00000510533 MYCT1Q8N699 235 aa11.74□□□□□ -0.53
NEK1-206ENST00000510533 FAM207AQ9NSI2 230 aaPredicted RBP11.74□□□□□ -0.53
NEK1-206ENST00000510533 ZNF532Q9HCE3 1301 aa11.74□□□□□ -0.53
NEK1-206ENST00000510533 NCKAP5LQ9HCH0 1330 aa11.74□□□□□ -0.53
NEK1-206ENST00000510533 UHRF1BP1Q6BDS2 1440 aa11.74□□□□□ -0.53
NEK1-206ENST00000510533 ERCC3P19447 782 aa11.74□□□□□ -0.53
NEK1-206ENST00000510533 LGSNQ5TDP6 509 aa11.74□□□□□ -0.53
NEK1-206ENST00000510533 SPATA5Q8NB90 893 aa11.74□□□□□ -0.53
NEK1-206ENST00000510533 MIPOL1Q8TD10 442 aa11.74□□□□□ -0.53
NEK1-206ENST00000510533 RAB17Q9H0T7 212 aa11.74□□□□□ -0.53
NEK1-206ENST00000510533 CPSF2Q9P2I0 782 aaKnown RBP11.74□□□□□ -0.53
NEK1-206ENST00000510533 USTQ9Y2C2 406 aa11.74□□□□□ -0.53
NEK1-206ENST00000510533 PFKFB1P16118 471 aa11.74□□□□□ -0.53
NEK1-206ENST00000510533 KRT15P19012 456 aa11.74□□□□□ -0.53
NEK1-206ENST00000510533 ZAP70P43403 619 aa11.74□□□□□ -0.53
NEK1-206ENST00000510533 DCUN1D2Q6PH85 259 aa11.74□□□□□ -0.53
NEK1-206ENST00000510533 DDX41Q9UJV9 622 aaKnown RBP11.74□□□□□ -0.53
NEK1-206ENST00000510533 SSH2Q76I76 1423 aa11.74□□□□□ -0.53
NEK1-206ENST00000510533 GCNT3O95395 438 aa11.74□□□□□ -0.53
NEK1-206ENST00000510533 ATP5JP18859 108 aa11.74□□□□□ -0.53
NEK1-206ENST00000510533 DENND2CQ68D51 928 aa11.74□□□□□ -0.53
NEK1-206ENST00000510533 VPS54Q9P1Q0 977 aa11.74□□□□□ -0.53
NEK1-206ENST00000510533 PARP2Q9UGN5 583 aa11.74□□□□□ -0.53
NEK1-206ENST00000510533 I3L4J1 428 aa11.73□□□□□ -0.53
NEK1-206ENST00000510533 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.73□□□□□ -0.53
NEK1-206ENST00000510533 MAIP1Q8WWC4 291 aa11.73□□□□□ -0.53
NEK1-206ENST00000510533 C19orf44Q9H6X5 657 aa11.73□□□□□ -0.53
NEK1-206ENST00000510533 EDC4Q6P2E9 1401 aaKnown RBP11.73□□□□□ -0.53
NEK1-206ENST00000510533 ZNF500O60304 480 aaPredicted RBP11.73□□□□□ -0.53
NEK1-206ENST00000510533 TAF12Q16514 161 aa11.73□□□□□ -0.53
NEK1-206ENST00000510533 C2CD5Q86YS7 1000 aa11.73□□□□□ -0.53
NEK1-206ENST00000510533 AFAP1L2Q8N4X5 818 aa11.73□□□□□ -0.53
NEK1-206ENST00000510533 CNBD1Q8NA66 436 aa11.73□□□□□ -0.53
NEK1-206ENST00000510533 TRIM58Q8NG06 486 aa11.73□□□□□ -0.53
NEK1-206ENST00000510533 OR8K1Q8NGG5 319 aa11.73□□□□□ -0.53
NEK1-206ENST00000510533 GABPB2Q8TAK5 448 aaPredicted RBP11.73□□□□□ -0.53
NEK1-206ENST00000510533 MRPL44Q9H9J2 332 aaKnown RBP11.73□□□□□ -0.53
NEK1-206ENST00000510533 TFCP2L1Q9NZI6 479 aa11.73□□□□□ -0.53
NEK1-206ENST00000510533 DAPK3O43293 454 aa11.73□□□□□ -0.53
NEK1-206ENST00000510533 SH3BP5O60239 455 aa11.73□□□□□ -0.53
NEK1-206ENST00000510533 GNA14O95837 355 aa11.73□□□□□ -0.53
NEK1-206ENST00000510533 PPARDQ03181 441 aa11.73□□□□□ -0.53
NEK1-206ENST00000510533 MAEAQ7L5Y9 396 aa11.73□□□□□ -0.53
NEK1-206ENST00000510533 RNF34Q969K3 372 aa11.73□□□□□ -0.53
NEK1-206ENST00000510533 ZNF274Q96GC6 653 aaPredicted RBP11.73□□□□□ -0.53
NEK1-206ENST00000510533 MAST3O60307 1309 aa11.73□□□□□ -0.53
NEK1-206ENST00000510533 CASQ2O14958 399 aaPredicted RBP11.73□□□□□ -0.53
NEK1-206ENST00000510533 GNPATO15228 680 aa11.73□□□□□ -0.53
NEK1-206ENST00000510533 TAF5LO75529 589 aa11.73□□□□□ -0.53
NEK1-206ENST00000510533 SLC1A4P43007 532 aa11.73□□□□□ -0.53
NEK1-206ENST00000510533 NLRC4Q9NPP4 1024 aa11.73□□□□□ -0.53
NEK1-206ENST00000510533 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.73□□□□□ -0.53
NEK1-206ENST00000510533 LONRF2Q1L5Z9 754 aa11.73□□□□□ -0.53
NEK1-206ENST00000510533 TRAPPC3LQ5T215 181 aa11.73□□□□□ -0.53
NEK1-206ENST00000510533 CCDC117Q8IWD4 279 aaPredicted RBP11.73□□□□□ -0.53
NEK1-206ENST00000510533 GDAP1L1Q96MZ0 367 aa11.73□□□□□ -0.53
NEK1-206ENST00000510533 LGR6Q9HBX8 967 aa11.73□□□□□ -0.53
NEK1-206ENST00000510533 PPANQ9NQ55 473 aaKnown RBP11.73□□□□□ -0.53
NEK1-206ENST00000510533 PFDN4Q9NQP4 134 aa11.73□□□□□ -0.53
NEK1-206ENST00000510533 AMFRQ9UKV5 643 aa11.73□□□□□ -0.53
NEK1-206ENST00000510533 ZNF608Q9ULD9 1512 aaPredicted RBP11.72□□□□□ -0.53
NEK1-206ENST00000510533 NUP153P49790 1475 aaKnown RBP11.72□□□□□ -0.53
NEK1-206ENST00000510533 MROH5Q6ZUA9 1318 aa11.72□□□□□ -0.53
NEK1-206ENST00000510533 KCNJ18B7U540 433 aa11.72□□□□□ -0.53
NEK1-206ENST00000510533 NR1I2O75469 434 aa11.72□□□□□ -0.53
NEK1-206ENST00000510533 KCNJ12Q14500 433 aa11.72□□□□□ -0.53
NEK1-206ENST00000510533 ZSCAN26Q16670 478 aa11.72□□□□□ -0.53
NEK1-206ENST00000510533 SEPT14Q6ZU15 432 aa11.72□□□□□ -0.53
NEK1-206ENST00000510533 INSRP06213 1382 aa11.72□□□□□ -0.53
NEK1-206ENST00000510533 RAD51AP2Q09MP3 1159 aa11.72□□□□□ -0.53
NEK1-206ENST00000510533 SLC52A2Q9HAB3 445 aa11.72□□□□□ -0.53
NEK1-206ENST00000510533 GGA1Q9UJY5 639 aa11.72□□□□□ -0.53
NEK1-206ENST00000510533 TRAPPC8Q9Y2L5 1435 aa11.72□□□□□ -0.53
NEK1-206ENST00000510533 RNF123Q5XPI4 1314 aa11.72□□□□□ -0.53
NEK1-206ENST00000510533 hCG_1642624A0A1W2PR95 340 aa11.72□□□□□ -0.53
NEK1-206ENST00000510533 REXO1Q8N1G1 1221 aaKnown RBP11.72□□□□□ -0.53
NEK1-206ENST00000510533 TBC1D31Q96DN5 1066 aa11.72□□□□□ -0.53
NEK1-206ENST00000510533 C8orf37Q96NL8 207 aa11.72□□□□□ -0.53
NEK1-206ENST00000510533 NT5C3AQ9H0P0 336 aa11.72□□□□□ -0.53
NEK1-206ENST00000510533 MYO1AQ9UBC5 1043 aa11.72□□□□□ -0.53
NEK1-206ENST00000510533 DDX39AO00148 427 aaKnown RBP11.72□□□□□ -0.53
NEK1-206ENST00000510533 RNF40O75150 1001 aa11.72□□□□□ -0.53
NEK1-206ENST00000510533 CTNNA1P35221 906 aaKnown RBP11.72□□□□□ -0.53
NEK1-206ENST00000510533 LSM14BQ9BX40 385 aaKnown RBP11.72□□□□□ -0.53
NEK1-206ENST00000510533 PPP2R2CQ9Y2T4 447 aa11.72□□□□□ -0.53
NEK1-206ENST00000510533 RGS16O15492 202 aaPredicted RBP11.71□□□□□ -0.53
NEK1-206ENST00000510533 GSPT1P15170 499 aaKnown RBP11.71□□□□□ -0.53
NEK1-206ENST00000510533 CCDC38Q502W7 563 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms