RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 ERO1AQ96HE7 468 aa14.04□□□□□ -0.16
HMGXB3-203ENST00000510472 CPA4Q9UI42 421 aa14.04□□□□□ -0.16
HMGXB3-203ENST00000510472 FGAP02671 866 aa14.03□□□□□ -0.16
HMGXB3-203ENST00000510472 FGRP09769 529 aa14.03□□□□□ -0.16
HMGXB3-203ENST00000510472 HSPD1P10809 573 aaKnown RBP14.03□□□□□ -0.16
HMGXB3-203ENST00000510472 RASA1P20936 1047 aa14.03□□□□□ -0.16
HMGXB3-203ENST00000510472 CTGFP29279 349 aa14.03□□□□□ -0.16
HMGXB3-203ENST00000510472 TDO2P48775 406 aa14.03□□□□□ -0.16
HMGXB3-203ENST00000510472 POTEEQ6S8J3 1075 aa14.03□□□□□ -0.16
HMGXB3-203ENST00000510472 OTOP1Q7RTM1 612 aa14.03□□□□□ -0.16
HMGXB3-203ENST00000510472 CD99L2Q8TCZ2 262 aa14.03□□□□□ -0.16
HMGXB3-203ENST00000510472 ABHD8Q96I13 439 aa14.03□□□□□ -0.16
HMGXB3-203ENST00000510472 NAPBQ9H115 298 aa14.03□□□□□ -0.16
HMGXB3-203ENST00000510472 ASCC2Q9H1I8 757 aaPredicted RBP14.03□□□□□ -0.16
HMGXB3-203ENST00000510472 TMOD4Q9NZQ9 345 aa14.03□□□□□ -0.16
HMGXB3-203ENST00000510472 ANAPC4Q9UJX5 808 aa14.03□□□□□ -0.16
HMGXB3-203ENST00000510472 TACC3Q9Y6A5 838 aa14.03□□□□□ -0.16
HMGXB3-203ENST00000510472 MYH7P12883 1935 aa14.03□□□□□ -0.16
HMGXB3-203ENST00000510472 CCDC171Q6TFL3 1326 aa14.02□□□□□ -0.17
HMGXB3-203ENST00000510472 IGKV6D-41A0A0C4DH26 115 aa14.02□□□□□ -0.17
HMGXB3-203ENST00000510472 HIP1O00291 1037 aa14.02□□□□□ -0.17
HMGXB3-203ENST00000510472 LACTBP83111 547 aaPredicted RBP14.02□□□□□ -0.17
HMGXB3-203ENST00000510472 PPARAQ07869 468 aa14.02□□□□□ -0.17
HMGXB3-203ENST00000510472 PABPC4Q13310 644 aaKnown RBP eCLIP14.02□□□□□ -0.17
HMGXB3-203ENST00000510472 KANSL2Q9H9L4 492 aa14.02□□□□□ -0.17
HMGXB3-203ENST00000510472 TMX2Q9Y320 296 aa14.02□□□□□ -0.17
HMGXB3-203ENST00000510472 ZMYM6O95789 1325 aa14.01□□□□□ -0.17
HMGXB3-203ENST00000510472 MPHOSPH10O00566 681 aaKnown RBP14.01□□□□□ -0.17
HMGXB3-203ENST00000510472 USP14P54578 494 aa14.01□□□□□ -0.17
HMGXB3-203ENST00000510472 KIAA1755Q5JYT7 1200 aa14.01□□□□□ -0.17
HMGXB3-203ENST00000510472 CWC27Q6UX04 472 aaKnown RBP14.01□□□□□ -0.17
HMGXB3-203ENST00000510472 P2RX7Q99572 595 aaKnown RBP14.01□□□□□ -0.17
HMGXB3-203ENST00000510472 ARHGAP39Q9C0H5 1083 aa14.01□□□□□ -0.17
HMGXB3-203ENST00000510472 IL25Q9H293 177 aa14.01□□□□□ -0.17
HMGXB3-203ENST00000510472 EFCC1Q9HA90 598 aa14.01□□□□□ -0.17
HMGXB3-203ENST00000510472 PNMA3Q9UL41 463 aa14.01□□□□□ -0.17
HMGXB3-203ENST00000510472 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.01□□□□□ -0.17
HMGXB3-203ENST00000510472 NAV1Q8NEY1 1877 aa14.01□□□□□ -0.17
HMGXB3-203ENST00000510472 VCAM1P19320 739 aa14□□□□□ -0.17
HMGXB3-203ENST00000510472 OSBPP22059 807 aa14□□□□□ -0.17
HMGXB3-203ENST00000510472 GCLCP48506 637 aaPredicted RBP14□□□□□ -0.17
HMGXB3-203ENST00000510472 FBXO46Q6PJ61 603 aaPredicted RBP14□□□□□ -0.17
HMGXB3-203ENST00000510472 CATSPERGQ6ZRH7 1159 aa14□□□□□ -0.17
HMGXB3-203ENST00000510472 CLEC10AQ8IUN9 316 aa14□□□□□ -0.17
HMGXB3-203ENST00000510472 MKNK2Q9HBH9 465 aa14□□□□□ -0.17
HMGXB3-203ENST00000510472 ZNF287Q9HBT7 754 aa14□□□□□ -0.17
HMGXB3-203ENST00000510472 DIAPH3Q9NSV4 1193 aa14□□□□□ -0.17
HMGXB3-203ENST00000510472 PTPN22Q9Y2R2 807 aa14□□□□□ -0.17
HMGXB3-203ENST00000510472 TRIM17Q9Y577 477 aa14□□□□□ -0.17
HMGXB3-203ENST00000510472 PRDM1O75626 825 aa13.99□□□□□ -0.17
HMGXB3-203ENST00000510472 GNRH1P01148 92 aa13.99□□□□□ -0.17
HMGXB3-203ENST00000510472 EEF2P13639 858 aaKnown RBP13.99□□□□□ -0.17
HMGXB3-203ENST00000510472 CHMLP26374 656 aa13.99□□□□□ -0.17
HMGXB3-203ENST00000510472 ICA1Q05084 483 aa13.99□□□□□ -0.17
HMGXB3-203ENST00000510472 ZYXQ15942 572 aaKnown RBP13.99□□□□□ -0.17
HMGXB3-203ENST00000510472 FAM110CQ1W6H9 321 aa13.99□□□□□ -0.17
HMGXB3-203ENST00000510472 STK11IPQ8N1F8 1099 aa13.99□□□□□ -0.17
HMGXB3-203ENST00000510472 NEDD1Q8NHV4 660 aa13.99□□□□□ -0.17
HMGXB3-203ENST00000510472 SMCR8Q8TEV9 937 aaPredicted RBP13.99□□□□□ -0.17
HMGXB3-203ENST00000510472 TRIM47Q96LD4 638 aa13.99□□□□□ -0.17
HMGXB3-203ENST00000510472 FEZ1Q99689 392 aa13.99□□□□□ -0.17
HMGXB3-203ENST00000510472 INCENPQ9NQS7 918 aa13.99□□□□□ -0.17
HMGXB3-203ENST00000510472 NYAP2Q9P242 653 aa13.99□□□□□ -0.17
HMGXB3-203ENST00000510472 RBPJLQ9UBG7 517 aa13.99□□□□□ -0.17
HMGXB3-203ENST00000510472 MORF4L1Q9UBU8 362 aa13.99□□□□□ -0.17
HMGXB3-203ENST00000510472 BAZ2AQ9UIF9 1905 aaKnown RBP13.99□□□□□ -0.17
HMGXB3-203ENST00000510472 PTPRFP10586 1907 aa13.98□□□□□ -0.17
HMGXB3-203ENST00000510472 USP17L15C9J2P7 530 aa13.98□□□□□ -0.17
HMGXB3-203ENST00000510472 USP17L13C9JLJ4 530 aa13.98□□□□□ -0.17
HMGXB3-203ENST00000510472 USP17L11C9JVI0 530 aa13.98□□□□□ -0.17
HMGXB3-203ENST00000510472 USP17L18D6R9N7 530 aa13.98□□□□□ -0.17
HMGXB3-203ENST00000510472 USP17L22D6RA61 530 aa13.98□□□□□ -0.17
HMGXB3-203ENST00000510472 USP17L17D6RBQ6 530 aa13.98□□□□□ -0.17
HMGXB3-203ENST00000510472 USP17L19D6RCP7 530 aa13.98□□□□□ -0.17
HMGXB3-203ENST00000510472 USP17L20D6RJB6 530 aa13.98□□□□□ -0.17
HMGXB3-203ENST00000510472 ORC4O43929 436 aa13.98□□□□□ -0.17
HMGXB3-203ENST00000510472 PSMC4P43686 418 aa13.98□□□□□ -0.17
HMGXB3-203ENST00000510472 NOVP48745 357 aa13.98□□□□□ -0.17
HMGXB3-203ENST00000510472 MFAP1P55081 439 aaKnown RBP13.98□□□□□ -0.17
HMGXB3-203ENST00000510472 HERVK_113P62684 666 aa13.98□□□□□ -0.17
HMGXB3-203ENST00000510472 CTDSPL2Q05D32 466 aa13.98□□□□□ -0.17
HMGXB3-203ENST00000510472 PDE4BQ07343 736 aa13.98□□□□□ -0.17
HMGXB3-203ENST00000510472 USP17L24Q0WX57 530 aa13.98□□□□□ -0.17
HMGXB3-203ENST00000510472 ARHGEF6Q15052 776 aa13.98□□□□□ -0.17
HMGXB3-203ENST00000510472 LBX2Q6XYB7 198 aa13.98□□□□□ -0.17
HMGXB3-203ENST00000510472 SKAP1Q86WV1 359 aa13.98□□□□□ -0.17
HMGXB3-203ENST00000510472 ZNF444Q8N0Y2 327 aaPredicted RBP13.98□□□□□ -0.17
HMGXB3-203ENST00000510472 ANKRD13CQ8N6S4 541 aa13.98□□□□□ -0.17
HMGXB3-203ENST00000510472 LPAR1Q92633 364 aa13.98□□□□□ -0.17
HMGXB3-203ENST00000510472 MKL1Q969V6 931 aa13.98□□□□□ -0.17
HMGXB3-203ENST00000510472 DSCC1Q9BVC3 393 aa13.98□□□□□ -0.17
HMGXB3-203ENST00000510472 NBPF3Q9H094 633 aa13.98□□□□□ -0.17
HMGXB3-203ENST00000510472 VCPKMTQ9H867 229 aa13.98□□□□□ -0.17
HMGXB3-203ENST00000510472 ARHGEF10LQ9HCE6 1279 aa13.98□□□□□ -0.17
HMGXB3-203ENST00000510472 TXNRD2Q9NNW7 524 aa13.98□□□□□ -0.17
HMGXB3-203ENST00000510472 HPS5Q9UPZ3 1129 aa13.98□□□□□ -0.17
HMGXB3-203ENST00000510472 SLC3A2P08195 630 aaKnown RBP13.97□□□□□ -0.17
HMGXB3-203ENST00000510472 IRX3P78415 501 aaPredicted RBP13.97□□□□□ -0.17
HMGXB3-203ENST00000510472 RPAP3Q9H6T3 665 aaPredicted RBP13.97□□□□□ -0.17
HMGXB3-203ENST00000510472 MTMR4Q9NYA4 1195 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms