RNA–Protein interactions for RNA: ENST00000510331.1

LSM6-206, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-206ENST00000510331 SWAP70Q9UH65 585 aa22.3■■□□□ 1.16
LSM6-206ENST00000510331 MKI67P46013 3256 aaKnown RBP22.3■■□□□ 1.16
LSM6-206ENST00000510331 PRMT2P55345 433 aa22.29■■□□□ 1.16
LSM6-206ENST00000510331 CTR9Q6PD62 1173 aa22.29■■□□□ 1.16
LSM6-206ENST00000510331 USP17L2Q6R6M4 530 aa22.29■■□□□ 1.16
LSM6-206ENST00000510331 AMOTL1Q8IY63 956 aa22.29■■□□□ 1.16
LSM6-206ENST00000510331 LNPKQ9C0E8 428 aa22.29■■□□□ 1.16
LSM6-206ENST00000510331 ARPP21Q9UBL0 812 aaPredicted RBP22.29■■□□□ 1.16
LSM6-206ENST00000510331 PDE4DIPQ5VU43 2346 aa22.28■■□□□ 1.16
LSM6-206ENST00000510331 POTEFA5A3E0 1075 aa22.28■■□□□ 1.16
LSM6-206ENST00000510331 GSG1L2A8MUP6 293 aa22.28■■□□□ 1.16
LSM6-206ENST00000510331 PEX10O60683 326 aa22.28■■□□□ 1.16
LSM6-206ENST00000510331 MYCP01106 439 aaPredicted RBP22.28■■□□□ 1.16
LSM6-206ENST00000510331 AKR1B1P15121 316 aa22.28■■□□□ 1.16
LSM6-206ENST00000510331 HOXA7P31268 230 aaPredicted RBP22.28■■□□□ 1.16
LSM6-206ENST00000510331 GCLCP48506 637 aaPredicted RBP22.28■■□□□ 1.16
LSM6-206ENST00000510331 C16orf86Q6ZW13 317 aa22.28■■□□□ 1.16
LSM6-206ENST00000510331 SMC5Q8IY18 1101 aa22.28■■□□□ 1.16
LSM6-206ENST00000510331 C12orf42Q96LP6 360 aa22.28■■□□□ 1.16
LSM6-206ENST00000510331 SEC62Q99442 399 aaKnown RBP22.28■■□□□ 1.16
LSM6-206ENST00000510331 KIAA1683Q9H0B3 1180 aa22.28■■□□□ 1.16
LSM6-206ENST00000510331 GABRQQ9UN88 632 aa22.28■■□□□ 1.16
LSM6-206ENST00000510331 PLXNB2O15031 1838 aa22.28■■□□□ 1.16
LSM6-206ENST00000510331 ROBO3Q96MS0 1386 aa22.27■■□□□ 1.16
LSM6-206ENST00000510331 A0A0G2JMZ2 1700 aa22.27■■□□□ 1.16
LSM6-206ENST00000510331 TNPO2O14787 897 aaKnown RBP22.27■■□□□ 1.16
LSM6-206ENST00000510331 IGHDP01880 384 aa22.27■■□□□ 1.16
LSM6-206ENST00000510331 VCAM1P19320 739 aa22.27■■□□□ 1.16
LSM6-206ENST00000510331 CDK8P49336 464 aa22.27■■□□□ 1.16
LSM6-206ENST00000510331 PDE1AP54750 535 aa22.27■■□□□ 1.16
LSM6-206ENST00000510331 HERVK_113P62684 666 aa22.27■■□□□ 1.16
LSM6-206ENST00000510331 RAET1EQ8TD07 263 aa22.27■■□□□ 1.16
LSM6-206ENST00000510331 STAP2Q9UGK3 403 aa22.27■■□□□ 1.16
LSM6-206ENST00000510331 A0A1W2PRG0 241 aa22.26■■□□□ 1.15
LSM6-206ENST00000510331 HOXD10P28358 340 aa22.26■■□□□ 1.15
LSM6-206ENST00000510331 B4GALNT3Q6L9W6 998 aa22.26■■□□□ 1.15
LSM6-206ENST00000510331 TMEM179Q6ZVK1 233 aa22.26■■□□□ 1.15
LSM6-206ENST00000510331 P2RX7Q99572 595 aaKnown RBP22.26■■□□□ 1.15
LSM6-206ENST00000510331 RWDD1Q9H446 243 aaPredicted RBP22.26■■□□□ 1.15
LSM6-206ENST00000510331 TXNRD2Q9NNW7 524 aa22.26■■□□□ 1.15
LSM6-206ENST00000510331 PARP14Q460N5 1801 aa22.26■■□□□ 1.15
LSM6-206ENST00000510331 USP14P54578 494 aa22.25■■□□□ 1.15
LSM6-206ENST00000510331 IRX6P78412 446 aaPredicted RBP22.25■■□□□ 1.15
LSM6-206ENST00000510331 LRRFIP1Q32MZ4 808 aaKnown RBP22.25■■□□□ 1.15
LSM6-206ENST00000510331 MORF4L1Q9UBU8 362 aa22.25■■□□□ 1.15
LSM6-206ENST00000510331 TAOK2Q9UL54 1235 aa22.25■■□□□ 1.15
LSM6-206ENST00000510331 RLFQ13129 1914 aa22.25■■□□□ 1.15
LSM6-206ENST00000510331 TDO2P48775 406 aa22.24■■□□□ 1.15
LSM6-206ENST00000510331 ICA1Q05084 483 aa22.24■■□□□ 1.15
LSM6-206ENST00000510331 ZMYM1Q5SVZ6 1142 aa22.24■■□□□ 1.15
LSM6-206ENST00000510331 POTEEQ6S8J3 1075 aa22.24■■□□□ 1.15
LSM6-206ENST00000510331 NBPF11Q86T75 865 aa22.24■■□□□ 1.15
LSM6-206ENST00000510331 GRK4P32298 578 aa22.23■■□□□ 1.15
LSM6-206ENST00000510331 FLT3LGP49771 235 aa22.23■■□□□ 1.15
LSM6-206ENST00000510331 SBK1Q52WX2 424 aa22.23■■□□□ 1.15
LSM6-206ENST00000510331 GIMAP6Q6P9H5 292 aa22.23■■□□□ 1.15
LSM6-206ENST00000510331 STK11IPQ8N1F8 1099 aa22.23■■□□□ 1.15
LSM6-206ENST00000510331 GNAT2P19087 354 aa22.22■■□□□ 1.15
LSM6-206ENST00000510331 CCDC129Q6ZRS4 1044 aa22.22■■□□□ 1.15
LSM6-206ENST00000510331 PAGR1Q9BTK6 254 aa22.22■■□□□ 1.15
LSM6-206ENST00000510331 RPAP3Q9H6T3 665 aaPredicted RBP22.22■■□□□ 1.15
LSM6-206ENST00000510331 MINDY4BA8MYZ0 360 aa22.21■■□□□ 1.15
LSM6-206ENST00000510331 USP17L15C9J2P7 530 aa22.21■■□□□ 1.15
LSM6-206ENST00000510331 USP17L13C9JLJ4 530 aa22.21■■□□□ 1.15
LSM6-206ENST00000510331 USP17L11C9JVI0 530 aa22.21■■□□□ 1.15
LSM6-206ENST00000510331 USP17L18D6R9N7 530 aa22.21■■□□□ 1.15
LSM6-206ENST00000510331 USP17L22D6RA61 530 aa22.21■■□□□ 1.15
LSM6-206ENST00000510331 USP17L17D6RBQ6 530 aa22.21■■□□□ 1.15
LSM6-206ENST00000510331 USP17L19D6RCP7 530 aa22.21■■□□□ 1.15
LSM6-206ENST00000510331 USP17L20D6RJB6 530 aa22.21■■□□□ 1.15
LSM6-206ENST00000510331 APPP05067 770 aa22.21■■□□□ 1.15
LSM6-206ENST00000510331 NUCB1Q02818 461 aa22.21■■□□□ 1.15
LSM6-206ENST00000510331 USP17L24Q0WX57 530 aa22.21■■□□□ 1.15
LSM6-206ENST00000510331 KIAA1755Q5JYT7 1200 aa22.21■■□□□ 1.15
LSM6-206ENST00000510331 CHD1LQ86WJ1 897 aa22.21■■□□□ 1.15
LSM6-206ENST00000510331 COA7Q96BR5 231 aa22.21■■□□□ 1.15
LSM6-206ENST00000510331 EVI5LQ96CN4 794 aa22.21■■□□□ 1.15
LSM6-206ENST00000510331 CCDC17Q96LX7 622 aa22.21■■□□□ 1.15
LSM6-206ENST00000510331 RBPJLQ9UBG7 517 aa22.21■■□□□ 1.15
LSM6-206ENST00000510331 MYH4Q9Y623 1939 aa22.2■■□□□ 1.14
LSM6-206ENST00000510331 FOXP2O15409 715 aa22.2■■□□□ 1.14
LSM6-206ENST00000510331 ELNP15502 786 aa22.2■■□□□ 1.14
LSM6-206ENST00000510331 RASA1P20936 1047 aa22.2■■□□□ 1.14
LSM6-206ENST00000510331 MTFR1Q15390 333 aa22.2■■□□□ 1.14
LSM6-206ENST00000510331 CATSPERGQ6ZRH7 1159 aa22.2■■□□□ 1.14
LSM6-206ENST00000510331 SIAH1Q8IUQ4 282 aa22.2■■□□□ 1.14
LSM6-206ENST00000510331 SLAIN1Q8ND83 568 aa22.2■■□□□ 1.14
LSM6-206ENST00000510331 ADCY3O60266 1144 aa22.19■■□□□ 1.14
LSM6-206ENST00000510331 CNMDO75829 334 aa22.19■■□□□ 1.14
LSM6-206ENST00000510331 EN2P19622 333 aaPredicted RBP22.19■■□□□ 1.14
LSM6-206ENST00000510331 ERVK-9P63128 1117 aa22.19■■□□□ 1.14
LSM6-206ENST00000510331 ERVK-24P63145 666 aa22.19■■□□□ 1.14
LSM6-206ENST00000510331 IFNL3Q8IZI9 196 aa22.19■■□□□ 1.14
LSM6-206ENST00000510331 GPRC5AQ8NFJ5 357 aa22.19■■□□□ 1.14
LSM6-206ENST00000510331 GTF3C2Q8WUA4 911 aaPredicted RBP22.19■■□□□ 1.14
LSM6-206ENST00000510331 TMEM106CQ9BVX2 250 aa22.19■■□□□ 1.14
LSM6-206ENST00000510331 ARHGEF10LQ9HCE6 1279 aa22.19■■□□□ 1.14
LSM6-206ENST00000510331 SPDYE16A6NNV3 312 aaPredicted RBP22.18■■□□□ 1.14
LSM6-206ENST00000510331 IRF5Q13568 498 aa22.18■■□□□ 1.14
LSM6-206ENST00000510331 SPICE1Q8N0Z3 855 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms