RNA–Protein interactions for RNA: ENST00000509662.5

ATP2C1-217, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 559 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-217ENST00000509662 RAET1EQ8TD07 263 aa28.43■■■□□ 2.14
ATP2C1-217ENST00000509662 CCDC136Q96JN2 1154 aa28.43■■■□□ 2.14
ATP2C1-217ENST00000509662 KIAA1683Q9H0B3 1180 aa28.42■■■□□ 2.14
ATP2C1-217ENST00000509662 EMILIN3Q9NT22 766 aa28.42■■■□□ 2.14
ATP2C1-217ENST00000509662 MYPNQ86TC9 1320 aa28.42■■■□□ 2.14
ATP2C1-217ENST00000509662 TRIM6-TRIM34B2RNG4 842 aa28.41■■■□□ 2.14
ATP2C1-217ENST00000509662 GNAT2P19087 354 aa28.41■■■□□ 2.14
ATP2C1-217ENST00000509662 GIMAP6Q6P9H5 292 aa28.41■■■□□ 2.14
ATP2C1-217ENST00000509662 TICAM2Q86XR7 235 aa28.41■■■□□ 2.14
ATP2C1-217ENST00000509662 DYNLL2Q96FJ2 89 aa28.41■■■□□ 2.14
ATP2C1-217ENST00000509662 CCDC17Q96LX7 622 aa28.41■■■□□ 2.14
ATP2C1-217ENST00000509662 TMEM106CQ9BVX2 250 aa28.41■■■□□ 2.14
ATP2C1-217ENST00000509662 ZSWIM8A7E2V4 1837 aa28.41■■■□□ 2.14
ATP2C1-217ENST00000509662 TNPO2O14787 897 aaKnown RBP28.4■■■□□ 2.14
ATP2C1-217ENST00000509662 GPAA1O43292 621 aa28.4■■■□□ 2.14
ATP2C1-217ENST00000509662 GSPT1P15170 499 aaKnown RBP28.4■■■□□ 2.14
ATP2C1-217ENST00000509662 EVX2Q03828 476 aa28.4■■■□□ 2.14
ATP2C1-217ENST00000509662 SEPT2Q15019 361 aa28.4■■■□□ 2.14
ATP2C1-217ENST00000509662 TTC22Q5TAA0 569 aa28.4■■■□□ 2.14
ATP2C1-217ENST00000509662 ERICH6BQ5W0A0 696 aa28.4■■■□□ 2.14
ATP2C1-217ENST00000509662 CTR9Q6PD62 1173 aa28.4■■■□□ 2.14
ATP2C1-217ENST00000509662 TMEM179Q6ZVK1 233 aa28.4■■■□□ 2.14
ATP2C1-217ENST00000509662 ZNF333Q96JL9 665 aa28.4■■■□□ 2.14
ATP2C1-217ENST00000509662 C12orf42Q96LP6 360 aa28.4■■■□□ 2.14
ATP2C1-217ENST00000509662 SEC62Q99442 399 aaKnown RBP28.4■■■□□ 2.14
ATP2C1-217ENST00000509662 P2RX7Q99572 595 aaKnown RBP28.4■■■□□ 2.14
ATP2C1-217ENST00000509662 ARPP21Q9UBL0 812 aaPredicted RBP28.4■■■□□ 2.14
ATP2C1-217ENST00000509662 BAZ2AQ9UIF9 1905 aaKnown RBP28.39■■■□□ 2.14
ATP2C1-217ENST00000509662 CDK8P49336 464 aa28.39■■■□□ 2.14
ATP2C1-217ENST00000509662 ZYXQ15942 572 aaKnown RBP28.39■■■□□ 2.14
ATP2C1-217ENST00000509662 SLC44A5Q8NCS7 719 aa28.39■■■□□ 2.14
ATP2C1-217ENST00000509662 RILPL2Q969X0 211 aa28.39■■■□□ 2.14
ATP2C1-217ENST00000509662 COA7Q96BR5 231 aa28.39■■■□□ 2.14
ATP2C1-217ENST00000509662 CYP2D7A0A087X1C5 515 aa28.38■■■□□ 2.13
ATP2C1-217ENST00000509662 GSG1L2A8MUP6 293 aa28.38■■■□□ 2.13
ATP2C1-217ENST00000509662 GUCY1A2P33402 732 aa28.38■■■□□ 2.13
ATP2C1-217ENST00000509662 C16orf86Q6ZW13 317 aa28.38■■■□□ 2.13
ATP2C1-217ENST00000509662 ACER1Q8TDN7 264 aa28.38■■■□□ 2.13
ATP2C1-217ENST00000509662 GTF3C2Q8WUA4 911 aaPredicted RBP28.38■■■□□ 2.13
ATP2C1-217ENST00000509662 USP17L15C9J2P7 530 aa28.37■■■□□ 2.13
ATP2C1-217ENST00000509662 USP17L13C9JLJ4 530 aa28.37■■■□□ 2.13
ATP2C1-217ENST00000509662 USP17L11C9JVI0 530 aa28.37■■■□□ 2.13
ATP2C1-217ENST00000509662 USP17L18D6R9N7 530 aa28.37■■■□□ 2.13
ATP2C1-217ENST00000509662 USP17L22D6RA61 530 aa28.37■■■□□ 2.13
ATP2C1-217ENST00000509662 USP17L17D6RBQ6 530 aa28.37■■■□□ 2.13
ATP2C1-217ENST00000509662 USP17L19D6RCP7 530 aa28.37■■■□□ 2.13
ATP2C1-217ENST00000509662 USP17L20D6RJB6 530 aa28.37■■■□□ 2.13
ATP2C1-217ENST00000509662 APPP05067 770 aa28.37■■■□□ 2.13
ATP2C1-217ENST00000509662 GRK4P32298 578 aa28.37■■■□□ 2.13
ATP2C1-217ENST00000509662 HERVK_113P62684 666 aa28.37■■■□□ 2.13
ATP2C1-217ENST00000509662 PRKCZQ05513 592 aa28.37■■■□□ 2.13
ATP2C1-217ENST00000509662 USP17L24Q0WX57 530 aa28.37■■■□□ 2.13
ATP2C1-217ENST00000509662 SBK1Q52WX2 424 aa28.37■■■□□ 2.13
ATP2C1-217ENST00000509662 SH3TC2Q8TF17 1288 aa28.37■■■□□ 2.13
ATP2C1-217ENST00000509662 MORF4L1Q9UBU8 362 aa28.37■■■□□ 2.13
ATP2C1-217ENST00000509662 MGAMO43451 1857 aa28.37■■■□□ 2.13
ATP2C1-217ENST00000509662 A0A0D9SFI3 127 aa28.35■■■□□ 2.13
ATP2C1-217ENST00000509662 FAM227BQ96M60 508 aa28.35■■■□□ 2.13
ATP2C1-217ENST00000509662 EPB41L4AQ9HCS5 686 aaPredicted RBP28.35■■■□□ 2.13
ATP2C1-217ENST00000509662 PATL2C9JE40 543 aaKnown RBP28.34■■■□□ 2.13
ATP2C1-217ENST00000509662 FLT3LGP49771 235 aa28.34■■■□□ 2.13
ATP2C1-217ENST00000509662 GPRC5AQ8NFJ5 357 aa28.34■■■□□ 2.13
ATP2C1-217ENST00000509662 NACAP1Q9BZK3 213 aa28.34■■■□□ 2.13
ATP2C1-217ENST00000509662 ARHGEF10LQ9HCE6 1279 aa28.34■■■□□ 2.13
ATP2C1-217ENST00000509662 BIN2Q9UBW5 565 aaPredicted RBP28.34■■■□□ 2.13
ATP2C1-217ENST00000509662 GABRQQ9UN88 632 aa28.34■■■□□ 2.13
ATP2C1-217ENST00000509662 HTTP42858 3142 aa28.34■■■□□ 2.13
ATP2C1-217ENST00000509662 MINDY4BA8MYZ0 360 aa28.33■■■□□ 2.13
ATP2C1-217ENST00000509662 AKR1B1P15121 316 aa28.33■■■□□ 2.13
ATP2C1-217ENST00000509662 SDSP20132 328 aa28.33■■■□□ 2.13
ATP2C1-217ENST00000509662 TDO2P48775 406 aa28.33■■■□□ 2.13
ATP2C1-217ENST00000509662 CCDC129Q6ZRS4 1044 aa28.33■■■□□ 2.13
ATP2C1-217ENST00000509662 SKAP1Q86WV1 359 aa28.33■■■□□ 2.13
ATP2C1-217ENST00000509662 SLAIN1Q8ND83 568 aa28.33■■■□□ 2.13
ATP2C1-217ENST00000509662 SH2D4AQ9H788 454 aa28.33■■■□□ 2.13
ATP2C1-217ENST00000509662 HELLSQ9NRZ9 838 aa28.33■■■□□ 2.13
ATP2C1-217ENST00000509662 MYH8P13535 1937 aa28.33■■■□□ 2.13
ATP2C1-217ENST00000509662 POTEFA5A3E0 1075 aa28.32■■■□□ 2.12
ATP2C1-217ENST00000509662 VCAM1P19320 739 aa28.32■■■□□ 2.12
ATP2C1-217ENST00000509662 NMIQ13287 307 aaPredicted RBP28.32■■■□□ 2.12
ATP2C1-217ENST00000509662 CATSPERGQ6ZRH7 1159 aa28.32■■■□□ 2.12
ATP2C1-217ENST00000509662 CCAR1Q8IX12 1150 aaKnown RBP28.32■■■□□ 2.12
ATP2C1-217ENST00000509662 MKNK2Q9HBH9 465 aa28.32■■■□□ 2.12
ATP2C1-217ENST00000509662 ZNF287Q9HBT7 754 aa28.32■■■□□ 2.12
ATP2C1-217ENST00000509662 RBPJLQ9UBG7 517 aa28.32■■■□□ 2.12
ATP2C1-217ENST00000509662 SMIM22K7EJ46 135 aa28.31■■■□□ 2.12
ATP2C1-217ENST00000509662 ADCY3O60266 1144 aa28.31■■■□□ 2.12
ATP2C1-217ENST00000509662 MYCP01106 439 aaPredicted RBP28.31■■■□□ 2.12
ATP2C1-217ENST00000509662 UBXN2AP68543 259 aa28.31■■■□□ 2.12
ATP2C1-217ENST00000509662 ICA1Q05084 483 aa28.31■■■□□ 2.12
ATP2C1-217ENST00000509662 IRF5Q13568 498 aa28.31■■■□□ 2.12
ATP2C1-217ENST00000509662 KANSL2Q9H9L4 492 aa28.31■■■□□ 2.12
ATP2C1-217ENST00000509662 PPP4R2Q9NY27 417 aa28.31■■■□□ 2.12
ATP2C1-217ENST00000509662 A0A1W2PRG0 241 aa28.3■■■□□ 2.12
ATP2C1-217ENST00000509662 FOXP2O15409 715 aa28.3■■■□□ 2.12
ATP2C1-217ENST00000509662 IFNL3Q8IZI9 196 aa28.3■■■□□ 2.12
ATP2C1-217ENST00000509662 PXYLP1Q8TE99 480 aa28.3■■■□□ 2.12
ATP2C1-217ENST00000509662 PAGR1Q9BTK6 254 aa28.3■■■□□ 2.12
ATP2C1-217ENST00000509662 RPAP3Q9H6T3 665 aaPredicted RBP28.3■■■□□ 2.12
ATP2C1-217ENST00000509662 KIAA0100Q14667 2235 aaKnown RBP28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms