RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 PTPN11Q06124 597 aaPredicted RBP4.5□□□□□ -1.69
DEPDC1B-204ENST00000509006 ZNF746Q6NUN9 644 aaPredicted RBP4.5□□□□□ -1.69
DEPDC1B-204ENST00000509006 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.5□□□□□ -1.69
DEPDC1B-204ENST00000509006 DBX2Q6ZNG2 339 aa4.5□□□□□ -1.69
DEPDC1B-204ENST00000509006 TMPRSS7Q7RTY8 843 aa4.5□□□□□ -1.69
DEPDC1B-204ENST00000509006 CREG2Q8IUH2 290 aa4.5□□□□□ -1.69
DEPDC1B-204ENST00000509006 MARCH10Q8NA82 808 aaPredicted RBP4.5□□□□□ -1.69
DEPDC1B-204ENST00000509006 SGPP1Q9BX95 441 aa4.5□□□□□ -1.69
DEPDC1B-204ENST00000509006 CEP44Q9C0F1 390 aa4.5□□□□□ -1.69
DEPDC1B-204ENST00000509006 WNT10AQ9GZT5 417 aa4.5□□□□□ -1.69
DEPDC1B-204ENST00000509006 CNOT6Q9ULM6 557 aaKnown RBP4.5□□□□□ -1.69
DEPDC1B-204ENST00000509006 SAMM50Q9Y512 469 aa4.5□□□□□ -1.69
DEPDC1B-204ENST00000509006 GIPC1O14908 333 aa4.49□□□□□ -1.69
DEPDC1B-204ENST00000509006 CELA3AP09093 270 aa4.49□□□□□ -1.69
DEPDC1B-204ENST00000509006 CAP2P40123 477 aa4.49□□□□□ -1.69
DEPDC1B-204ENST00000509006 KIR3DL1P43629 444 aa4.49□□□□□ -1.69
DEPDC1B-204ENST00000509006 CDK8P49336 464 aa4.49□□□□□ -1.69
DEPDC1B-204ENST00000509006 ETF1P62495 437 aaKnown RBP4.49□□□□□ -1.69
DEPDC1B-204ENST00000509006 SKOR2Q2VWA4 1001 aaPredicted RBP4.49□□□□□ -1.69
DEPDC1B-204ENST00000509006 TCERG1LQ5VWI1 586 aa4.49□□□□□ -1.69
DEPDC1B-204ENST00000509006 PCNX4Q63HM2 1172 aa4.49□□□□□ -1.69
DEPDC1B-204ENST00000509006 CDH24Q86UP0 819 aa4.49□□□□□ -1.69
DEPDC1B-204ENST00000509006 GGNQ86UU5 652 aa4.49□□□□□ -1.69
DEPDC1B-204ENST00000509006 IRF2BP1Q8IU81 584 aa4.49□□□□□ -1.69
DEPDC1B-204ENST00000509006 GAL3ST3Q96A11 431 aa4.49□□□□□ -1.69
DEPDC1B-204ENST00000509006 SLC6A17Q9H1V8 727 aa4.49□□□□□ -1.69
DEPDC1B-204ENST00000509006 GCM1Q9NP62 436 aa4.49□□□□□ -1.69
DEPDC1B-204ENST00000509006 RTEL1Q9NZ71 1219 aa4.49□□□□□ -1.69
DEPDC1B-204ENST00000509006 WWC3Q9ULE0 1092 aa4.49□□□□□ -1.69
DEPDC1B-204ENST00000509006 CYP8B1Q9UNU6 501 aa4.49□□□□□ -1.69
DEPDC1B-204ENST00000509006 KCTD3Q9Y597 815 aa4.49□□□□□ -1.69
DEPDC1B-204ENST00000509006 SEMA7AO75326 666 aa4.48□□□□□ -1.69
DEPDC1B-204ENST00000509006 CST3P01034 146 aaPredicted RBP4.48□□□□□ -1.69
DEPDC1B-204ENST00000509006 ZGLP1P0C6A0 271 aa4.48□□□□□ -1.69
DEPDC1B-204ENST00000509006 MAPK8P45983 427 aa4.48□□□□□ -1.69
DEPDC1B-204ENST00000509006 NFKB2Q00653 900 aa4.48□□□□□ -1.69
DEPDC1B-204ENST00000509006 SSPNQ14714 243 aa4.48□□□□□ -1.69
DEPDC1B-204ENST00000509006 LRRC14Q15048 493 aa4.48□□□□□ -1.69
DEPDC1B-204ENST00000509006 HID1Q8IV36 788 aa4.48□□□□□ -1.69
DEPDC1B-204ENST00000509006 ASB16Q96NS5 453 aa4.48□□□□□ -1.69
DEPDC1B-204ENST00000509006 DPH2Q9BQC3 489 aaPredicted RBP4.48□□□□□ -1.69
DEPDC1B-204ENST00000509006 PEX10O60683 326 aa4.47□□□□□ -1.69
DEPDC1B-204ENST00000509006 CYP7A1P22680 504 aa4.47□□□□□ -1.69
DEPDC1B-204ENST00000509006 TPP2P29144 1249 aaPredicted RBP4.47□□□□□ -1.69
DEPDC1B-204ENST00000509006 ZNF385BQ569K4 471 aa4.47□□□□□ -1.69
DEPDC1B-204ENST00000509006 WIPI1Q5MNZ9 446 aaPredicted RBP4.47□□□□□ -1.69
DEPDC1B-204ENST00000509006 ALG1LQ6GMV1 187 aa4.47□□□□□ -1.69
DEPDC1B-204ENST00000509006 HDXQ7Z353 690 aa4.47□□□□□ -1.69
DEPDC1B-204ENST00000509006 PRRT2Q7Z6L0 340 aaPredicted RBP4.47□□□□□ -1.69
DEPDC1B-204ENST00000509006 PDZD8Q8NEN9 1154 aa4.47□□□□□ -1.69
DEPDC1B-204ENST00000509006 INTS4Q96HW7 963 aaKnown RBP4.47□□□□□ -1.69
DEPDC1B-204ENST00000509006 Q96M66 194 aa4.47□□□□□ -1.69
DEPDC1B-204ENST00000509006 XYLT2Q9H1B5 865 aa4.47□□□□□ -1.69
DEPDC1B-204ENST00000509006 C12orf49Q9H741 205 aa4.47□□□□□ -1.69
DEPDC1B-204ENST00000509006 TEX51A0A1B0GUA7 166 aa4.46□□□□□ -1.7
DEPDC1B-204ENST00000509006 SUPT5HO00267 1087 aaKnown RBP4.46□□□□□ -1.7
DEPDC1B-204ENST00000509006 USP17L7P0C7H9 530 aa4.46□□□□□ -1.7
DEPDC1B-204ENST00000509006 PI3P19957 117 aa4.46□□□□□ -1.7
DEPDC1B-204ENST00000509006 GRK4P32298 578 aa4.46□□□□□ -1.7
DEPDC1B-204ENST00000509006 GALK1P51570 392 aa4.46□□□□□ -1.7
DEPDC1B-204ENST00000509006 EGR3Q06889 387 aa4.46□□□□□ -1.7
DEPDC1B-204ENST00000509006 GAB4Q2WGN9 574 aa4.46□□□□□ -1.7
DEPDC1B-204ENST00000509006 TMEM132EQ6IEE7 984 aa4.46□□□□□ -1.7
DEPDC1B-204ENST00000509006 LILRA2Q8N149 483 aa4.46□□□□□ -1.7
DEPDC1B-204ENST00000509006 CXorf38Q8TB03 319 aa4.46□□□□□ -1.7
DEPDC1B-204ENST00000509006 PIWIL2Q8TC59 973 aaKnown RBP4.46□□□□□ -1.7
DEPDC1B-204ENST00000509006 COX4I2Q96KJ9 171 aa4.46□□□□□ -1.7
DEPDC1B-204ENST00000509006 DUSP15Q9H1R2 295 aaPredicted RBP4.46□□□□□ -1.7
DEPDC1B-204ENST00000509006 FAM8A1Q9UBU6 413 aa4.46□□□□□ -1.7
DEPDC1B-204ENST00000509006 DUSP13Q9UII6 198 aa4.46□□□□□ -1.7
DEPDC1B-204ENST00000509006 YBX2Q9Y2T7 364 aaKnown RBP4.46□□□□□ -1.7
DEPDC1B-204ENST00000509006 OTOL1A6NHN0 477 aaPredicted RBP4.45□□□□□ -1.7
DEPDC1B-204ENST00000509006 RFXAPO00287 272 aa4.45□□□□□ -1.7
DEPDC1B-204ENST00000509006 P4HBP07237 508 aaKnown RBP4.45□□□□□ -1.7
DEPDC1B-204ENST00000509006 PDE6BP35913 854 aa4.45□□□□□ -1.7
DEPDC1B-204ENST00000509006 SV2BQ7L1I2 683 aa4.45□□□□□ -1.7
DEPDC1B-204ENST00000509006 ZSCAN29Q8IWY8 852 aaPredicted RBP4.45□□□□□ -1.7
DEPDC1B-204ENST00000509006 PANK1Q8TE04 598 aa4.45□□□□□ -1.7
DEPDC1B-204ENST00000509006 ZNF552Q9H707 407 aaPredicted RBP4.45□□□□□ -1.7
DEPDC1B-204ENST00000509006 CWC22Q9HCG8 908 aaKnown RBP4.45□□□□□ -1.7
DEPDC1B-204ENST00000509006 SPG7Q9UQ90 795 aa4.45□□□□□ -1.7
DEPDC1B-204ENST00000509006 FITM1A5D6W6 292 aa4.44□□□□□ -1.7
DEPDC1B-204ENST00000509006 OXR1Q8N573 874 aa4.44□□□□□ -1.7
DEPDC1B-204ENST00000509006 FEZF2Q8TBJ5 459 aa4.44□□□□□ -1.7
DEPDC1B-204ENST00000509006 GPR160Q9UJ42 338 aa4.44□□□□□ -1.7
DEPDC1B-204ENST00000509006 PCDHA11Q9Y5I1 949 aa4.44□□□□□ -1.7
DEPDC1B-204ENST00000509006 SNCAIPQ9Y6H5 919 aa4.44□□□□□ -1.7
DEPDC1B-204ENST00000509006 ADAMTS20P59510 1910 aa4.44□□□□□ -1.7
DEPDC1B-204ENST00000509006 GFRA2O00451 464 aa4.43□□□□□ -1.7
DEPDC1B-204ENST00000509006 CELA3BP08861 270 aa4.43□□□□□ -1.7
DEPDC1B-204ENST00000509006 LTKP29376 864 aa4.43□□□□□ -1.7
DEPDC1B-204ENST00000509006 ATP2B2Q01814 1243 aa4.43□□□□□ -1.7
DEPDC1B-204ENST00000509006 NR0B2Q15466 257 aa4.43□□□□□ -1.7
DEPDC1B-204ENST00000509006 TMEM151BQ8IW70 566 aa4.43□□□□□ -1.7
DEPDC1B-204ENST00000509006 TRIT1Q9H3H1 467 aaKnown RBP4.43□□□□□ -1.7
DEPDC1B-204ENST00000509006 TJP2Q9UDY2 1190 aa4.43□□□□□ -1.7
DEPDC1B-204ENST00000509006 IVNS1ABPQ9Y6Y0 642 aa4.43□□□□□ -1.7
DEPDC1B-204ENST00000509006 SASH1O94885 1247 aa4.42□□□□□ -1.7
DEPDC1B-204ENST00000509006 ADRB1P08588 477 aa4.42□□□□□ -1.7
DEPDC1B-204ENST00000509006 ETV3P41162 512 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms