RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 CCNA1P78396 465 aa11.56□□□□□ -0.56
NEDD9-211ENST00000508546 MFSD14CQ5VZR4 134 aa11.56□□□□□ -0.56
NEDD9-211ENST00000508546 USP17L2Q6R6M4 530 aa11.56□□□□□ -0.56
NEDD9-211ENST00000508546 PPM1EQ8WY54 764 aa11.56□□□□□ -0.56
NEDD9-211ENST00000508546 LPAR1Q92633 364 aa11.56□□□□□ -0.56
NEDD9-211ENST00000508546 EDC3Q96F86 508 aaKnown RBP11.56□□□□□ -0.56
NEDD9-211ENST00000508546 MEIS3Q99687 375 aa11.56□□□□□ -0.56
NEDD9-211ENST00000508546 PAGR1Q9BTK6 254 aa11.56□□□□□ -0.56
NEDD9-211ENST00000508546 API5Q9BZZ5 524 aaKnown RBP11.56□□□□□ -0.56
NEDD9-211ENST00000508546 SENP6Q9GZR1 1112 aaPredicted RBP11.56□□□□□ -0.56
NEDD9-211ENST00000508546 LRP2BPQ9P2M1 347 aa11.56□□□□□ -0.56
NEDD9-211ENST00000508546 ZBTB21Q9ULJ3 1066 aa11.56□□□□□ -0.56
NEDD9-211ENST00000508546 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.56□□□□□ -0.56
NEDD9-211ENST00000508546 ZNF236Q9UL36 1845 aa11.56□□□□□ -0.56
NEDD9-211ENST00000508546 MYO9BQ13459 2157 aa11.55□□□□□ -0.56
NEDD9-211ENST00000508546 XIRP2A4UGR9 3374 aa11.55□□□□□ -0.56
NEDD9-211ENST00000508546 SLC15A5A6NIM6 579 aa11.55□□□□□ -0.56
NEDD9-211ENST00000508546 DNM1LO00429 736 aa11.55□□□□□ -0.56
NEDD9-211ENST00000508546 SRGAP3O43295 1099 aa11.55□□□□□ -0.56
NEDD9-211ENST00000508546 IGSF3O75054 1194 aa11.55□□□□□ -0.56
NEDD9-211ENST00000508546 HOXC6P09630 235 aa11.55□□□□□ -0.56
NEDD9-211ENST00000508546 UQCRFS1P1P0C7P4 283 aa11.55□□□□□ -0.56
NEDD9-211ENST00000508546 RTP1P59025 263 aa11.55□□□□□ -0.56
NEDD9-211ENST00000508546 GORABQ5T7V8 394 aa11.55□□□□□ -0.56
NEDD9-211ENST00000508546 CRACR2BQ8N4Y2 399 aaPredicted RBP11.55□□□□□ -0.56
NEDD9-211ENST00000508546 C12orf42Q96LP6 360 aa11.55□□□□□ -0.56
NEDD9-211ENST00000508546 EMILIN3Q9NT22 766 aa11.55□□□□□ -0.56
NEDD9-211ENST00000508546 AATFQ9NY61 560 aaKnown RBP eCLIP11.55□□□□□ -0.56
NEDD9-211ENST00000508546 PRKAG2Q9UGJ0 569 aa11.55□□□□□ -0.56
NEDD9-211ENST00000508546 DDX20Q9UHI6 824 aaKnown RBP11.55□□□□□ -0.56
NEDD9-211ENST00000508546 FLT1P17948 1338 aa11.55□□□□□ -0.56
NEDD9-211ENST00000508546 REV3LO60673 3130 aa11.54□□□□□ -0.56
NEDD9-211ENST00000508546 CNMDO75829 334 aa11.54□□□□□ -0.56
NEDD9-211ENST00000508546 GDF11O95390 407 aa11.54□□□□□ -0.56
NEDD9-211ENST00000508546 IGHA2P01877 340 aa11.54□□□□□ -0.56
NEDD9-211ENST00000508546 GNAI3P08754 354 aa11.54□□□□□ -0.56
NEDD9-211ENST00000508546 CT47B1P0C2W7 299 aaPredicted RBP11.54□□□□□ -0.56
NEDD9-211ENST00000508546 PTPREP23469 700 aa11.54□□□□□ -0.56
NEDD9-211ENST00000508546 DNAJB2P25686 324 aa11.54□□□□□ -0.56
NEDD9-211ENST00000508546 MRPS5P82675 430 aaKnown RBP11.54□□□□□ -0.56
NEDD9-211ENST00000508546 SHROOM1Q2M3G4 852 aaPredicted RBP11.54□□□□□ -0.56
NEDD9-211ENST00000508546 NAA16Q6N069 864 aaPredicted RBP11.54□□□□□ -0.56
NEDD9-211ENST00000508546 LBX2Q6XYB7 198 aa11.54□□□□□ -0.56
NEDD9-211ENST00000508546 MAPKAPK5Q8IW41 473 aa11.54□□□□□ -0.56
NEDD9-211ENST00000508546 TGFBRAP1Q8WUH2 860 aa11.54□□□□□ -0.56
NEDD9-211ENST00000508546 BADQ92934 168 aa11.54□□□□□ -0.56
NEDD9-211ENST00000508546 TRIM34Q9BYJ4 488 aa11.54□□□□□ -0.56
NEDD9-211ENST00000508546 CWC22Q9HCG8 908 aaKnown RBP11.54□□□□□ -0.56
NEDD9-211ENST00000508546 FLRT1Q9NZU1 646 aa11.54□□□□□ -0.56
NEDD9-211ENST00000508546 NOB1Q9ULX3 412 aaKnown RBP11.54□□□□□ -0.56
NEDD9-211ENST00000508546 CHD9Q3L8U1 2897 aa11.53□□□□□ -0.56
NEDD9-211ENST00000508546 USP17L15C9J2P7 530 aa11.53□□□□□ -0.56
NEDD9-211ENST00000508546 USP17L13C9JLJ4 530 aa11.53□□□□□ -0.56
NEDD9-211ENST00000508546 USP17L11C9JVI0 530 aa11.53□□□□□ -0.56
NEDD9-211ENST00000508546 USP17L18D6R9N7 530 aa11.53□□□□□ -0.56
NEDD9-211ENST00000508546 USP17L22D6RA61 530 aa11.53□□□□□ -0.56
NEDD9-211ENST00000508546 USP17L17D6RBQ6 530 aa11.53□□□□□ -0.56
NEDD9-211ENST00000508546 USP17L19D6RCP7 530 aa11.53□□□□□ -0.56
NEDD9-211ENST00000508546 USP17L20D6RJB6 530 aa11.53□□□□□ -0.56
NEDD9-211ENST00000508546 USP17L24Q0WX57 530 aa11.53□□□□□ -0.56
NEDD9-211ENST00000508546 GRB14Q14449 540 aa11.53□□□□□ -0.56
NEDD9-211ENST00000508546 ATF7IPQ6VMQ6 1270 aa11.53□□□□□ -0.56
NEDD9-211ENST00000508546 RNPC3Q96LT9 517 aaKnown RBP11.53□□□□□ -0.56
NEDD9-211ENST00000508546 EPHX3Q9H6B9 360 aa11.53□□□□□ -0.56
NEDD9-211ENST00000508546 PRDM5Q9NQX1 630 aaPredicted RBP11.53□□□□□ -0.56
NEDD9-211ENST00000508546 PALD1Q9ULE6 856 aa11.53□□□□□ -0.56
NEDD9-211ENST00000508546 HLA-DOAP06340 250 aa11.52□□□□□ -0.57
NEDD9-211ENST00000508546 USP14P54578 494 aa11.52□□□□□ -0.57
NEDD9-211ENST00000508546 ATP2B2Q01814 1243 aa11.52□□□□□ -0.57
NEDD9-211ENST00000508546 CATSPERGQ6ZRH7 1159 aa11.52□□□□□ -0.57
NEDD9-211ENST00000508546 ADGRA1Q86SQ6 560 aa11.52□□□□□ -0.57
NEDD9-211ENST00000508546 TRMT2AQ8IZ69 625 aaKnown RBP11.52□□□□□ -0.57
NEDD9-211ENST00000508546 IL27Q8NEV9 243 aa11.52□□□□□ -0.57
NEDD9-211ENST00000508546 NPLOC4Q8TAT6 608 aa11.52□□□□□ -0.57
NEDD9-211ENST00000508546 KIAA1683Q9H0B3 1180 aa11.52□□□□□ -0.57
NEDD9-211ENST00000508546 ZNF576Q9H609 170 aa11.52□□□□□ -0.57
NEDD9-211ENST00000508546 C11orf16Q9NQ32 467 aa11.52□□□□□ -0.57
NEDD9-211ENST00000508546 PDLIM7Q9NR12 457 aa11.52□□□□□ -0.57
NEDD9-211ENST00000508546 ATP11BQ9Y2G3 1177 aa11.52□□□□□ -0.57
NEDD9-211ENST00000508546 IVNS1ABPQ9Y6Y0 642 aa11.52□□□□□ -0.57
NEDD9-211ENST00000508546 MYH8P13535 1937 aa11.51□□□□□ -0.57
NEDD9-211ENST00000508546 GH2P01242 217 aa11.51□□□□□ -0.57
NEDD9-211ENST00000508546 CYBAP13498 195 aa11.51□□□□□ -0.57
NEDD9-211ENST00000508546 CNGA1P29973 690 aa11.51□□□□□ -0.57
NEDD9-211ENST00000508546 EPHB4P54760 987 aa11.51□□□□□ -0.57
NEDD9-211ENST00000508546 SNX17Q15036 470 aa11.51□□□□□ -0.57
NEDD9-211ENST00000508546 AKNAD1Q5T1N1 836 aa11.51□□□□□ -0.57
NEDD9-211ENST00000508546 TATDN1Q6P1N9 297 aa11.51□□□□□ -0.57
NEDD9-211ENST00000508546 SLC39A5Q6ZMH5 540 aa11.51□□□□□ -0.57
NEDD9-211ENST00000508546 ARRDC4Q8NCT1 418 aa11.51□□□□□ -0.57
NEDD9-211ENST00000508546 TRPV1Q8NER1 839 aa11.51□□□□□ -0.57
NEDD9-211ENST00000508546 ARHGAP45Q92619 1136 aa11.51□□□□□ -0.57
NEDD9-211ENST00000508546 BTBD7Q9P203 1132 aa11.51□□□□□ -0.57
NEDD9-211ENST00000508546 NDUFB9Q9Y6M9 179 aa11.51□□□□□ -0.57
NEDD9-211ENST00000508546 A0A0G2JMZ2 1700 aa11.51□□□□□ -0.57
NEDD9-211ENST00000508546 PARP14Q460N5 1801 aa11.51□□□□□ -0.57
NEDD9-211ENST00000508546 CHD7Q9P2D1 2997 aa11.5□□□□□ -0.57
NEDD9-211ENST00000508546 LRRC37A2A6NM11 1700 aa11.5□□□□□ -0.57
NEDD9-211ENST00000508546 STRNO43815 780 aa11.5□□□□□ -0.57
NEDD9-211ENST00000508546 CYP2E1P05181 493 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 187.8 ms