RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 PLEKHM2Q8IWE5 1019 aa18.66■□□□□ 0.58
COL1A1-211ENST00000507689 CCAR1Q8IX12 1150 aaKnown RBP18.66■□□□□ 0.58
COL1A1-211ENST00000507689 SLC44A5Q8NCS7 719 aa18.66■□□□□ 0.58
COL1A1-211ENST00000507689 GTF3C2Q8WUA4 911 aaPredicted RBP18.66■□□□□ 0.58
COL1A1-211ENST00000507689 ECM2O94769 699 aaPredicted RBP18.65■□□□□ 0.58
COL1A1-211ENST00000507689 JAG1P78504 1218 aa18.65■□□□□ 0.58
COL1A1-211ENST00000507689 PDE4BQ07343 736 aa18.65■□□□□ 0.58
COL1A1-211ENST00000507689 MCMDC2Q4G0Z9 681 aa18.65■□□□□ 0.58
COL1A1-211ENST00000507689 NBPF11Q86T75 865 aa18.65■□□□□ 0.58
COL1A1-211ENST00000507689 IFNL3Q8IZI9 196 aa18.65■□□□□ 0.58
COL1A1-211ENST00000507689 ZNF444Q8N0Y2 327 aaPredicted RBP18.65■□□□□ 0.58
COL1A1-211ENST00000507689 KIAA1683Q9H0B3 1180 aa18.65■□□□□ 0.58
COL1A1-211ENST00000507689 ASCC2Q9H1I8 757 aaPredicted RBP18.65■□□□□ 0.58
COL1A1-211ENST00000507689 OSBPL3Q9H4L5 887 aa18.65■□□□□ 0.58
COL1A1-211ENST00000507689 DIAPH3Q9NSV4 1193 aa18.65■□□□□ 0.58
COL1A1-211ENST00000507689 PTPN22Q9Y2R2 807 aa18.65■□□□□ 0.58
COL1A1-211ENST00000507689 DDX60LQ5H9U9 1706 aaKnown RBP18.64■□□□□ 0.57
COL1A1-211ENST00000507689 HOXA7P31268 230 aaPredicted RBP18.64■□□□□ 0.57
COL1A1-211ENST00000507689 ATP2B2Q01814 1243 aa18.64■□□□□ 0.57
COL1A1-211ENST00000507689 ICA1Q05084 483 aa18.64■□□□□ 0.57
COL1A1-211ENST00000507689 SHROOM1Q2M3G4 852 aaPredicted RBP18.64■□□□□ 0.57
COL1A1-211ENST00000507689 STK11IPQ8N1F8 1099 aa18.64■□□□□ 0.57
COL1A1-211ENST00000507689 ANKRD13CQ8N6S4 541 aa18.64■□□□□ 0.57
COL1A1-211ENST00000507689 SEC62Q99442 399 aaKnown RBP18.64■□□□□ 0.57
COL1A1-211ENST00000507689 KANSL2Q9H9L4 492 aa18.64■□□□□ 0.57
COL1A1-211ENST00000507689 PHIPQ8WWQ0 1821 aa18.64■□□□□ 0.57
COL1A1-211ENST00000507689 USP17L15C9J2P7 530 aa18.63■□□□□ 0.57
COL1A1-211ENST00000507689 USP17L13C9JLJ4 530 aa18.63■□□□□ 0.57
COL1A1-211ENST00000507689 USP17L11C9JVI0 530 aa18.63■□□□□ 0.57
COL1A1-211ENST00000507689 USP17L18D6R9N7 530 aa18.63■□□□□ 0.57
COL1A1-211ENST00000507689 USP17L22D6RA61 530 aa18.63■□□□□ 0.57
COL1A1-211ENST00000507689 USP17L17D6RBQ6 530 aa18.63■□□□□ 0.57
COL1A1-211ENST00000507689 USP17L19D6RCP7 530 aa18.63■□□□□ 0.57
COL1A1-211ENST00000507689 USP17L20D6RJB6 530 aa18.63■□□□□ 0.57
COL1A1-211ENST00000507689 NEFLP07196 543 aa18.63■□□□□ 0.57
COL1A1-211ENST00000507689 BCRP11274 1271 aa18.63■□□□□ 0.57
COL1A1-211ENST00000507689 USP17L24Q0WX57 530 aa18.63■□□□□ 0.57
COL1A1-211ENST00000507689 CWC22Q9HCG8 908 aaKnown RBP18.63■□□□□ 0.57
COL1A1-211ENST00000507689 TNPO2O14787 897 aaKnown RBP18.62■□□□□ 0.57
COL1A1-211ENST00000507689 AKR1B1P15121 316 aa18.62■□□□□ 0.57
COL1A1-211ENST00000507689 FAM110CQ1W6H9 321 aa18.62■□□□□ 0.57
COL1A1-211ENST00000507689 SLC9C1Q4G0N8 1177 aa18.62■□□□□ 0.57
COL1A1-211ENST00000507689 RAET1EQ8TD07 263 aa18.62■□□□□ 0.57
COL1A1-211ENST00000507689 COA7Q96BR5 231 aa18.62■□□□□ 0.57
COL1A1-211ENST00000507689 C12orf42Q96LP6 360 aa18.62■□□□□ 0.57
COL1A1-211ENST00000507689 EMILIN3Q9NT22 766 aa18.62■□□□□ 0.57
COL1A1-211ENST00000507689 ADGRA2Q96PE1 1338 aa18.62■□□□□ 0.57
COL1A1-211ENST00000507689 BAZ2AQ9UIF9 1905 aaKnown RBP18.61■□□□□ 0.57
COL1A1-211ENST00000507689 RAD21O60216 631 aa18.61■□□□□ 0.57
COL1A1-211ENST00000507689 EVX2Q03828 476 aa18.61■□□□□ 0.57
COL1A1-211ENST00000507689 ACER1Q8TDN7 264 aa18.61■□□□□ 0.57
COL1A1-211ENST00000507689 LPAR1Q92633 364 aa18.61■□□□□ 0.57
COL1A1-211ENST00000507689 ARHGAP39Q9C0H5 1083 aa18.61■□□□□ 0.57
COL1A1-211ENST00000507689 GOPCQ9HD26 462 aa18.61■□□□□ 0.57
COL1A1-211ENST00000507689 PTPRFP10586 1907 aa18.61■□□□□ 0.57
COL1A1-211ENST00000507689 LOC285556D6RIA3 1793 aa18.6■□□□□ 0.57
COL1A1-211ENST00000507689 MYPNQ86TC9 1320 aa18.6■□□□□ 0.57
COL1A1-211ENST00000507689 SDSP20132 328 aa18.6■□□□□ 0.57
COL1A1-211ENST00000507689 HERVK_113P62684 666 aa18.6■□□□□ 0.57
COL1A1-211ENST00000507689 PPARAQ07869 468 aa18.6■□□□□ 0.57
COL1A1-211ENST00000507689 PPP4R3BQ5MIZ7 849 aa18.6■□□□□ 0.57
COL1A1-211ENST00000507689 CCDC129Q6ZRS4 1044 aa18.6■□□□□ 0.57
COL1A1-211ENST00000507689 GPRC5AQ8NFJ5 357 aa18.6■□□□□ 0.57
COL1A1-211ENST00000507689 TANGO6Q9C0B7 1094 aa18.6■□□□□ 0.57
COL1A1-211ENST00000507689 EPB41L4AQ9HCS5 686 aaPredicted RBP18.6■□□□□ 0.57
COL1A1-211ENST00000507689 SRRDQ9UH36 339 aa18.6■□□□□ 0.57
COL1A1-211ENST00000507689 ROBO3Q96MS0 1386 aa18.59■□□□□ 0.57
COL1A1-211ENST00000507689 TSPY3P0CV98 308 aa18.59■□□□□ 0.57
COL1A1-211ENST00000507689 TSPY8P0CW00 308 aa18.59■□□□□ 0.57
COL1A1-211ENST00000507689 VCAM1P19320 739 aa18.59■□□□□ 0.57
COL1A1-211ENST00000507689 GUCY1A2P33402 732 aa18.59■□□□□ 0.57
COL1A1-211ENST00000507689 CCNA1P78396 465 aa18.59■□□□□ 0.57
COL1A1-211ENST00000507689 NMIQ13287 307 aaPredicted RBP18.59■□□□□ 0.57
COL1A1-211ENST00000507689 TRIM47Q96LD4 638 aa18.59■□□□□ 0.57
COL1A1-211ENST00000507689 FAM227BQ96M60 508 aa18.59■□□□□ 0.57
COL1A1-211ENST00000507689 P2RX7Q99572 595 aaKnown RBP18.59■□□□□ 0.57
COL1A1-211ENST00000507689 RPAP3Q9H6T3 665 aaPredicted RBP18.59■□□□□ 0.57
COL1A1-211ENST00000507689 BIN2Q9UBW5 565 aaPredicted RBP18.59■□□□□ 0.57
COL1A1-211ENST00000507689 MYH8P13535 1937 aa18.59■□□□□ 0.57
COL1A1-211ENST00000507689 CCDC171Q6TFL3 1326 aa18.58■□□□□ 0.57
COL1A1-211ENST00000507689 PAGR1Q9BTK6 254 aa18.58■□□□□ 0.56
COL1A1-211ENST00000507689 TMEM106CQ9BVX2 250 aa18.58■□□□□ 0.56
COL1A1-211ENST00000507689 HOXC10Q9NYD6 342 aa18.58■□□□□ 0.56
COL1A1-211ENST00000507689 TMX2Q9Y320 296 aa18.58■□□□□ 0.56
COL1A1-211ENST00000507689 PTCH2Q9Y6C5 1203 aa18.58■□□□□ 0.56
COL1A1-211ENST00000507689 A0A0D9SFI3 127 aa18.57■□□□□ 0.56
COL1A1-211ENST00000507689 EEF2P13639 858 aaKnown RBP18.57■□□□□ 0.56
COL1A1-211ENST00000507689 RASA1P20936 1047 aa18.57■□□□□ 0.56
COL1A1-211ENST00000507689 CWC27Q6UX04 472 aaKnown RBP18.57■□□□□ 0.56
COL1A1-211ENST00000507689 CATSPERGQ6ZRH7 1159 aa18.57■□□□□ 0.56
COL1A1-211ENST00000507689 RUFY2Q8WXA3 655 aa18.57■□□□□ 0.56
COL1A1-211ENST00000507689 TOMM22Q9NS69 142 aa18.57■□□□□ 0.56
COL1A1-211ENST00000507689 PRDM1O75626 825 aa18.56■□□□□ 0.56
COL1A1-211ENST00000507689 SOX10P56693 466 aa18.56■□□□□ 0.56
COL1A1-211ENST00000507689 COG2Q14746 738 aa18.56■□□□□ 0.56
COL1A1-211ENST00000507689 ALX1Q15699 326 aa18.56■□□□□ 0.56
COL1A1-211ENST00000507689 TTC22Q5TAA0 569 aa18.56■□□□□ 0.56
COL1A1-211ENST00000507689 VCPKMTQ9H867 229 aa18.56■□□□□ 0.56
COL1A1-211ENST00000507689 MORF4L1Q9UBU8 362 aa18.56■□□□□ 0.56
COL1A1-211ENST00000507689 RABGAP1Q9Y3P9 1069 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms