RNA–Protein interactions for RNA: ENST00000507653.1

AC008539.1-201, humanhuman

TSL 3 BASIC

Gene AC008539.1, Length 482 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008539.1-201ENST00000507653 CELA3AP09093 270 aa5.46□□□□□ -1.54
AC008539.1-201ENST00000507653 CCDC85BQ15834 202 aaPredicted RBP5.46□□□□□ -1.54
AC008539.1-201ENST00000507653 MARCH10Q8NA82 808 aaPredicted RBP5.46□□□□□ -1.54
AC008539.1-201ENST00000507653 COX4I2Q96KJ9 171 aa5.46□□□□□ -1.54
AC008539.1-201ENST00000507653 RSRP1Q9BUV0 290 aa5.46□□□□□ -1.54
AC008539.1-201ENST00000507653 TNKS2Q9H2K2 1166 aa5.46□□□□□ -1.54
AC008539.1-201ENST00000507653 MRS2Q9HD23 443 aa5.46□□□□□ -1.54
AC008539.1-201ENST00000507653 RNF19AQ9NV58 838 aa5.46□□□□□ -1.54
AC008539.1-201ENST00000507653 PCDHA4Q9UN74 947 aa5.46□□□□□ -1.54
AC008539.1-201ENST00000507653 MAPK8IP1Q9UQF2 711 aa5.46□□□□□ -1.54
AC008539.1-201ENST00000507653 FAM155AB1AL88 458 aaPredicted RBP5.45□□□□□ -1.54
AC008539.1-201ENST00000507653 TRIM13O60858 407 aa5.45□□□□□ -1.54
AC008539.1-201ENST00000507653 LEFTY1O75610 366 aa5.45□□□□□ -1.54
AC008539.1-201ENST00000507653 NEFMP07197 916 aa5.45□□□□□ -1.54
AC008539.1-201ENST00000507653 ZNF16P17020 682 aaPredicted RBP5.45□□□□□ -1.54
AC008539.1-201ENST00000507653 CYP7A1P22680 504 aa5.45□□□□□ -1.54
AC008539.1-201ENST00000507653 PWP1Q13610 501 aa5.45□□□□□ -1.54
AC008539.1-201ENST00000507653 TTBK2Q6IQ55 1244 aa5.45□□□□□ -1.54
AC008539.1-201ENST00000507653 GIPC2Q8TF65 315 aa5.45□□□□□ -1.54
AC008539.1-201ENST00000507653 GAL3ST3Q96A11 431 aa5.45□□□□□ -1.54
AC008539.1-201ENST00000507653 WDR26Q9H7D7 661 aa5.45□□□□□ -1.54
AC008539.1-201ENST00000507653 SNCAIPQ9Y6H5 919 aa5.45□□□□□ -1.54
AC008539.1-201ENST00000507653 FBXO24O75426 580 aa5.44□□□□□ -1.54
AC008539.1-201ENST00000507653 LRIG2O94898 1065 aa5.44□□□□□ -1.54
AC008539.1-201ENST00000507653 CAP2P40123 477 aa5.44□□□□□ -1.54
AC008539.1-201ENST00000507653 LIG3P49916 1009 aa5.44□□□□□ -1.54
AC008539.1-201ENST00000507653 TAGLNQ01995 201 aaKnown RBP5.44□□□□□ -1.54
AC008539.1-201ENST00000507653 ZP2Q05996 745 aa5.44□□□□□ -1.54
AC008539.1-201ENST00000507653 TRIM26Q12899 539 aaPredicted RBP5.44□□□□□ -1.54
AC008539.1-201ENST00000507653 PUM1Q14671 1186 aaKnown RBP eCLIP5.44□□□□□ -1.54
AC008539.1-201ENST00000507653 PPM1JQ5JR12 505 aa5.44□□□□□ -1.54
AC008539.1-201ENST00000507653 ZBTB37Q5TC79 503 aa5.44□□□□□ -1.54
AC008539.1-201ENST00000507653 RASIP1Q5U651 963 aa5.44□□□□□ -1.54
AC008539.1-201ENST00000507653 MFSD2AQ8NA29 543 aa5.44□□□□□ -1.54
AC008539.1-201ENST00000507653 XYLT2Q9H1B5 865 aa5.44□□□□□ -1.54
AC008539.1-201ENST00000507653 DCP1AQ9NPI6 582 aaPredicted RBP5.44□□□□□ -1.54
AC008539.1-201ENST00000507653 DCDC2CA8MYV0 355 aa5.43□□□□□ -1.54
AC008539.1-201ENST00000507653 INSRRP14616 1297 aa5.43□□□□□ -1.54
AC008539.1-201ENST00000507653 MEI1Q5TIA1 1274 aa5.43□□□□□ -1.54
AC008539.1-201ENST00000507653 GRIN3AQ8TCU5 1115 aa5.43□□□□□ -1.54
AC008539.1-201ENST00000507653 EPB41L4BQ9H329 900 aa5.43□□□□□ -1.54
AC008539.1-201ENST00000507653 KCNQ5Q9NR82 932 aa5.43□□□□□ -1.54
AC008539.1-201ENST00000507653 VTI1BQ9UEU0 232 aa5.43□□□□□ -1.54
AC008539.1-201ENST00000507653 TPX2Q9ULW0 747 aaKnown RBP5.43□□□□□ -1.54
AC008539.1-201ENST00000507653 CSADQ9Y600 493 aa5.43□□□□□ -1.54
AC008539.1-201ENST00000507653 NTF4P34130 210 aa5.42□□□□□ -1.54
AC008539.1-201ENST00000507653 SFRP5Q5T4F7 317 aa5.42□□□□□ -1.54
AC008539.1-201ENST00000507653 ARMCX6Q7L4S7 300 aa5.42□□□□□ -1.54
AC008539.1-201ENST00000507653 CYFIP1Q7L576 1253 aa5.42□□□□□ -1.54
AC008539.1-201ENST00000507653 ERMP1Q7Z2K6 904 aa5.42□□□□□ -1.54
AC008539.1-201ENST00000507653 C12orf40Q86WS4 652 aa5.42□□□□□ -1.54
AC008539.1-201ENST00000507653 PHC3Q8NDX5 983 aa5.42□□□□□ -1.54
AC008539.1-201ENST00000507653 C19orf73Q9NVV2 129 aa5.42□□□□□ -1.54
AC008539.1-201ENST00000507653 ETF1P62495 437 aaKnown RBP5.41□□□□□ -1.54
AC008539.1-201ENST00000507653 LMNB2Q03252 620 aa5.41□□□□□ -1.54
AC008539.1-201ENST00000507653 EFEMP1Q12805 493 aa5.41□□□□□ -1.54
AC008539.1-201ENST00000507653 TSNAXIP1Q2TAA8 658 aa5.41□□□□□ -1.54
AC008539.1-201ENST00000507653 HID1Q8IV36 788 aa5.41□□□□□ -1.54
AC008539.1-201ENST00000507653 MFSD4AQ8N468 514 aa5.41□□□□□ -1.54
AC008539.1-201ENST00000507653 RHOVQ96L33 236 aa5.41□□□□□ -1.54
AC008539.1-201ENST00000507653 HEXIM2Q96MH2 286 aaKnown RBP5.41□□□□□ -1.54
AC008539.1-201ENST00000507653 FAM161BQ96MY7 647 aa5.41□□□□□ -1.54
AC008539.1-201ENST00000507653 TMEM74Q96NL1 305 aa5.41□□□□□ -1.54
AC008539.1-201ENST00000507653 METTL5Q9NRN9 209 aaKnown RBP5.41□□□□□ -1.54
AC008539.1-201ENST00000507653 PRAMEF27A3QJZ7 478 aa5.4□□□□□ -1.54
AC008539.1-201ENST00000507653 GFRA2O00451 464 aa5.4□□□□□ -1.54
AC008539.1-201ENST00000507653 RAC2P15153 192 aa5.4□□□□□ -1.54
AC008539.1-201ENST00000507653 TFE3P19532 575 aaPredicted RBP5.4□□□□□ -1.54
AC008539.1-201ENST00000507653 KIR3DL1P43629 444 aa5.4□□□□□ -1.54
AC008539.1-201ENST00000507653 LDLRAD1Q5T700 205 aa5.4□□□□□ -1.54
AC008539.1-201ENST00000507653 C22orf34Q6ZV56 151 aa5.4□□□□□ -1.54
AC008539.1-201ENST00000507653 THAP5Q7Z6K1 395 aa5.4□□□□□ -1.54
AC008539.1-201ENST00000507653 LSRQ86X29 649 aaPredicted RBP5.4□□□□□ -1.54
AC008539.1-201ENST00000507653 SPACA3Q8IXA5 215 aa5.4□□□□□ -1.54
AC008539.1-201ENST00000507653 KCNN1Q92952 543 aa5.4□□□□□ -1.54
AC008539.1-201ENST00000507653 MIR1-1HGQ9H1L0 117 aa5.4□□□□□ -1.54
AC008539.1-201ENST00000507653 ROBO2Q9HCK4 1378 aa5.4□□□□□ -1.55
AC008539.1-201ENST00000507653 RPL6Q02878 288 aaKnown RBP5.39□□□□□ -1.55
AC008539.1-201ENST00000507653 PDE4BQ07343 736 aa5.39□□□□□ -1.55
AC008539.1-201ENST00000507653 MPRIPQ6WCQ1 1025 aa5.39□□□□□ -1.55
AC008539.1-201ENST00000507653 RGS22Q8NE09 1264 aa5.39□□□□□ -1.55
AC008539.1-201ENST00000507653 SYTL4Q96C24 671 aaPredicted RBP5.39□□□□□ -1.55
AC008539.1-201ENST00000507653 WNT10AQ9GZT5 417 aa5.39□□□□□ -1.55
AC008539.1-201ENST00000507653 ADAM30Q9UKF2 790 aa5.39□□□□□ -1.55
AC008539.1-201ENST00000507653 PRR36Q9H6K5 1346 aa5.39□□□□□ -1.55
AC008539.1-201ENST00000507653 FAM221AA4D161 298 aa5.38□□□□□ -1.55
AC008539.1-201ENST00000507653 OTOL1A6NHN0 477 aaPredicted RBP5.38□□□□□ -1.55
AC008539.1-201ENST00000507653 CILPO75339 1184 aa5.38□□□□□ -1.55
AC008539.1-201ENST00000507653 SRFP11831 508 aa5.38□□□□□ -1.55
AC008539.1-201ENST00000507653 ETV3P41162 512 aa5.38□□□□□ -1.55
AC008539.1-201ENST00000507653 PTPN11Q06124 597 aaPredicted RBP5.38□□□□□ -1.55
AC008539.1-201ENST00000507653 SPATS1Q496A3 300 aa5.38□□□□□ -1.55
AC008539.1-201ENST00000507653 LRFN4Q6PJG9 635 aa5.38□□□□□ -1.55
AC008539.1-201ENST00000507653 FAM214BQ7L5A3 538 aa5.38□□□□□ -1.55
AC008539.1-201ENST00000507653 RELL1Q8IUW5 271 aa5.38□□□□□ -1.55
AC008539.1-201ENST00000507653 GATAD2BQ8WXI9 593 aa5.38□□□□□ -1.55
AC008539.1-201ENST00000507653 PLPPR2Q96GM1 343 aa5.38□□□□□ -1.55
AC008539.1-201ENST00000507653 MIPEPQ99797 713 aa5.38□□□□□ -1.55
AC008539.1-201ENST00000507653 LRRC3Q9BY71 257 aa5.38□□□□□ -1.55
AC008539.1-201ENST00000507653 MYRFQ9Y2G1 1151 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms