RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 MYCNP04198 464 aaPredicted RBP17.13■□□□□ 0.33
DDR1-260ENST00000507533 USP17L24Q0WX57 530 aa17.13■□□□□ 0.33
DDR1-260ENST00000507533 GRB14Q14449 540 aa17.13■□□□□ 0.33
DDR1-260ENST00000507533 GRIN2CQ14957 1233 aa17.13■□□□□ 0.33
DDR1-260ENST00000507533 SNX17Q15036 470 aa17.13■□□□□ 0.33
DDR1-260ENST00000507533 PI16Q6UXB8 463 aa17.13■□□□□ 0.33
DDR1-260ENST00000507533 METTL16Q86W50 562 aaKnown RBP17.13■□□□□ 0.33
DDR1-260ENST00000507533 SPATA5Q8NB90 893 aa17.13■□□□□ 0.33
DDR1-260ENST00000507533 SSH1Q8WYL5 1049 aa17.13■□□□□ 0.33
DDR1-260ENST00000507533 RNPC3Q96LT9 517 aaKnown RBP17.13■□□□□ 0.33
DDR1-260ENST00000507533 CYBAP13498 195 aa17.12■□□□□ 0.33
DDR1-260ENST00000507533 TFCP2Q12800 502 aa17.12■□□□□ 0.33
DDR1-260ENST00000507533 ZYXQ15942 572 aaKnown RBP17.12■□□□□ 0.33
DDR1-260ENST00000507533 ANO1Q5XXA6 986 aa17.12■□□□□ 0.33
DDR1-260ENST00000507533 MAPKAPK5Q8IW41 473 aa17.12■□□□□ 0.33
DDR1-260ENST00000507533 TGFBRAP1Q8WUH2 860 aa17.12■□□□□ 0.33
DDR1-260ENST00000507533 NEUROD6Q96NK8 337 aa17.12■□□□□ 0.33
DDR1-260ENST00000507533 FRMPD3Q5JV73 1810 aa17.12■□□□□ 0.33
DDR1-260ENST00000507533 BAG3O95817 575 aa17.11■□□□□ 0.33
DDR1-260ENST00000507533 ADCYAP1R1P41586 468 aa17.11■□□□□ 0.33
DDR1-260ENST00000507533 GORABQ5T7V8 394 aa17.11■□□□□ 0.33
DDR1-260ENST00000507533 FERMT2Q96AC1 680 aa17.11■□□□□ 0.33
DDR1-260ENST00000507533 C12orf42Q96LP6 360 aa17.11■□□□□ 0.33
DDR1-260ENST00000507533 AATFQ9NY61 560 aaKnown RBP eCLIP17.11■□□□□ 0.33
DDR1-260ENST00000507533 BTBD7Q9P203 1132 aa17.11■□□□□ 0.33
DDR1-260ENST00000507533 LRP2BPQ9P2M1 347 aa17.11■□□□□ 0.33
DDR1-260ENST00000507533 PALD1Q9ULE6 856 aa17.11■□□□□ 0.33
DDR1-260ENST00000507533 IGHA2P01877 340 aa17.1■□□□□ 0.33
DDR1-260ENST00000507533 PLA2G5P39877 138 aa17.1■□□□□ 0.33
DDR1-260ENST00000507533 EPHB4P54760 987 aa17.1■□□□□ 0.33
DDR1-260ENST00000507533 CATSPERGQ6ZRH7 1159 aa17.1■□□□□ 0.33
DDR1-260ENST00000507533 DPP9Q86TI2 863 aa17.1■□□□□ 0.33
DDR1-260ENST00000507533 FEZ1Q99689 392 aa17.1■□□□□ 0.33
DDR1-260ENST00000507533 SEPT4O43236 478 aa17.09■□□□□ 0.33
DDR1-260ENST00000507533 GH2P01242 217 aa17.09■□□□□ 0.33
DDR1-260ENST00000507533 PLCG2P16885 1265 aa17.09■□□□□ 0.33
DDR1-260ENST00000507533 ITGB8P26012 769 aa17.09■□□□□ 0.33
DDR1-260ENST00000507533 TLE2Q04725 743 aa17.09■□□□□ 0.33
DDR1-260ENST00000507533 C1orf53Q5VUE5 145 aa17.09■□□□□ 0.33
DDR1-260ENST00000507533 FAM122AQ96E09 287 aa17.09■□□□□ 0.33
DDR1-260ENST00000507533 HDAC5Q9UQL6 1122 aa17.09■□□□□ 0.33
DDR1-260ENST00000507533 TACC3Q9Y6A5 838 aa17.09■□□□□ 0.33
DDR1-260ENST00000507533 FLT1P17948 1338 aa17.09■□□□□ 0.33
DDR1-260ENST00000507533 DNAJB2P25686 324 aa17.08■□□□□ 0.32
DDR1-260ENST00000507533 PPP4CP60510 307 aa17.08■□□□□ 0.32
DDR1-260ENST00000507533 LRRC41Q15345 812 aa17.08■□□□□ 0.32
DDR1-260ENST00000507533 OLFML2BQ68BL8 750 aa17.08■□□□□ 0.32
DDR1-260ENST00000507533 NAA16Q6N069 864 aaPredicted RBP17.08■□□□□ 0.32
DDR1-260ENST00000507533 LBX2Q6XYB7 198 aa17.08■□□□□ 0.32
DDR1-260ENST00000507533 PPM1EQ8WY54 764 aa17.08■□□□□ 0.32
DDR1-260ENST00000507533 SAP30BPQ9UHR5 308 aaKnown RBP17.08■□□□□ 0.32
DDR1-260ENST00000507533 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.07■□□□□ 0.32
DDR1-260ENST00000507533 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.07■□□□□ 0.32
DDR1-260ENST00000507533 HLA-DOAP06340 250 aa17.07■□□□□ 0.32
DDR1-260ENST00000507533 ADORA2AP29274 412 aa17.07■□□□□ 0.32
DDR1-260ENST00000507533 ARID4AP29374 1257 aaPredicted RBP17.07■□□□□ 0.32
DDR1-260ENST00000507533 MCAMP43121 646 aa17.07■□□□□ 0.32
DDR1-260ENST00000507533 USP14P54578 494 aa17.07■□□□□ 0.32
DDR1-260ENST00000507533 ATF7IPQ6VMQ6 1270 aa17.07■□□□□ 0.32
DDR1-260ENST00000507533 ATXN2LQ8WWM7 1075 aaKnown RBP17.07■□□□□ 0.32
DDR1-260ENST00000507533 ZNF576Q9H609 170 aa17.07■□□□□ 0.32
DDR1-260ENST00000507533 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.07■□□□□ 0.32
DDR1-260ENST00000507533 SIPA1L1O43166 1804 aa17.07■□□□□ 0.32
DDR1-260ENST00000507533 RLFQ13129 1914 aa17.06■□□□□ 0.32
DDR1-260ENST00000507533 SPDYE16A6NNV3 312 aaPredicted RBP17.06■□□□□ 0.32
DDR1-260ENST00000507533 CLTBP09497 229 aa17.06■□□□□ 0.32
DDR1-260ENST00000507533 RAG1P15918 1043 aa17.06■□□□□ 0.32
DDR1-260ENST00000507533 VCAM1P19320 739 aa17.06■□□□□ 0.32
DDR1-260ENST00000507533 PRAMEF19Q5SWL8 479 aa17.06■□□□□ 0.32
DDR1-260ENST00000507533 KIAA0355O15063 1070 aa17.05■□□□□ 0.32
DDR1-260ENST00000507533 STRNO43815 780 aa17.05■□□□□ 0.32
DDR1-260ENST00000507533 FPGSQ05932 587 aa17.05■□□□□ 0.32
DDR1-260ENST00000507533 RAB3GAP1Q15042 981 aa17.05■□□□□ 0.32
DDR1-260ENST00000507533 ACER1Q8TDN7 264 aa17.05■□□□□ 0.32
DDR1-260ENST00000507533 ADAMTS19Q8TE59 1207 aa17.05■□□□□ 0.32
DDR1-260ENST00000507533 TIFAQ96CG3 184 aa17.05■□□□□ 0.32
DDR1-260ENST00000507533 ASB2Q96Q27 587 aa17.05■□□□□ 0.32
DDR1-260ENST00000507533 GAS2L1Q99501 681 aaPredicted RBP17.05■□□□□ 0.32
DDR1-260ENST00000507533 KIAA1683Q9H0B3 1180 aa17.05■□□□□ 0.32
DDR1-260ENST00000507533 RPAP3Q9H6T3 665 aaPredicted RBP17.05■□□□□ 0.32
DDR1-260ENST00000507533 SRGAP3O43295 1099 aa17.04■□□□□ 0.32
DDR1-260ENST00000507533 UQCRFS1P1P0C7P4 283 aa17.04■□□□□ 0.32
DDR1-260ENST00000507533 ALDH1L2Q3SY69 923 aa17.04■□□□□ 0.32
DDR1-260ENST00000507533 FAM47AQ5JRC9 791 aa17.04■□□□□ 0.32
DDR1-260ENST00000507533 TATDN1Q6P1N9 297 aa17.04■□□□□ 0.32
DDR1-260ENST00000507533 ADGRA1Q86SQ6 560 aa17.04■□□□□ 0.32
DDR1-260ENST00000507533 MOV10L1Q9BXT6 1211 aaKnown RBP17.04■□□□□ 0.32
DDR1-260ENST00000507533 THEGQ9P2T0 379 aa17.04■□□□□ 0.32
DDR1-260ENST00000507533 PHF24Q9UPV7 400 aa17.04■□□□□ 0.32
DDR1-260ENST00000507533 ZNF521Q96K83 1311 aa17.03■□□□□ 0.32
DDR1-260ENST00000507533 PQBP1O60828 265 aaKnown RBP17.03■□□□□ 0.32
DDR1-260ENST00000507533 COBLO75128 1261 aa17.03■□□□□ 0.32
DDR1-260ENST00000507533 MAP3K12Q12852 859 aa17.03■□□□□ 0.32
DDR1-260ENST00000507533 UHRF1Q96T88 793 aaPredicted RBP17.03■□□□□ 0.32
DDR1-260ENST00000507533 MEIS3Q99687 375 aa17.03■□□□□ 0.32
DDR1-260ENST00000507533 SNRKQ9NRH2 765 aa17.03■□□□□ 0.32
DDR1-260ENST00000507533 SMC4Q9NTJ3 1288 aa17.03■□□□□ 0.32
DDR1-260ENST00000507533 TMEM39AQ9NV64 488 aa17.03■□□□□ 0.32
DDR1-260ENST00000507533 SLC5A4Q9NY91 659 aa17.03■□□□□ 0.32
DDR1-260ENST00000507533 ERCC3P19447 782 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms