RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 SAGE1Q9NXZ1 904 aa8.71□□□□□ -1.02
GYPB-206ENST00000506516 SERPINB13Q9UIV8 391 aa8.71□□□□□ -1.02
GYPB-206ENST00000506516 SNCAIPQ9Y6H5 919 aa8.71□□□□□ -1.02
GYPB-206ENST00000506516 FAM205CA6NFA0 338 aa8.7□□□□□ -1.02
GYPB-206ENST00000506516 HIP1O00291 1037 aa8.7□□□□□ -1.02
GYPB-206ENST00000506516 GPAA1O43292 621 aa8.7□□□□□ -1.02
GYPB-206ENST00000506516 PRKAB2O43741 272 aa8.7□□□□□ -1.02
GYPB-206ENST00000506516 TRPA1O75762 1119 aa8.7□□□□□ -1.02
GYPB-206ENST00000506516 APPP05067 770 aa8.7□□□□□ -1.02
GYPB-206ENST00000506516 PTPRAP18433 802 aa8.7□□□□□ -1.02
GYPB-206ENST00000506516 CAP2P40123 477 aa8.7□□□□□ -1.02
GYPB-206ENST00000506516 PLCD1P51178 756 aa8.7□□□□□ -1.02
GYPB-206ENST00000506516 PPIL2Q13356 520 aa8.7□□□□□ -1.02
GYPB-206ENST00000506516 SNAPC2Q13487 334 aa8.7□□□□□ -1.02
GYPB-206ENST00000506516 SLC4A8Q2Y0W8 1093 aa8.7□□□□□ -1.02
GYPB-206ENST00000506516 ZMYM1Q5SVZ6 1142 aa8.7□□□□□ -1.02
GYPB-206ENST00000506516 ERICH6BQ5W0A0 696 aa8.7□□□□□ -1.02
GYPB-206ENST00000506516 TBC1D2Q9BYX2 928 aa8.7□□□□□ -1.02
GYPB-206ENST00000506516 HELLSQ9NRZ9 838 aa8.7□□□□□ -1.02
GYPB-206ENST00000506516 GINM1Q9NU53 330 aa8.7□□□□□ -1.02
GYPB-206ENST00000506516 RNF186Q9NXI6 227 aa8.7□□□□□ -1.02
GYPB-206ENST00000506516 ZHX2Q9Y6X8 837 aa8.7□□□□□ -1.02
GYPB-206ENST00000506516 MAST2Q6P0Q8 1798 aa8.7□□□□□ -1.02
GYPB-206ENST00000506516 POTEB3A0JP26 581 aa8.69□□□□□ -1.02
GYPB-206ENST00000506516 FAM196BA6NMK8 535 aa8.69□□□□□ -1.02
GYPB-206ENST00000506516 USP17L5A8MUK1 530 aa8.69□□□□□ -1.02
GYPB-206ENST00000506516 USP17L12C9JPN9 530 aa8.69□□□□□ -1.02
GYPB-206ENST00000506516 USP17L21D6R901 530 aa8.69□□□□□ -1.02
GYPB-206ENST00000506516 CXCL11O14625 94 aa8.69□□□□□ -1.02
GYPB-206ENST00000506516 IRF6O14896 467 aa8.69□□□□□ -1.02
GYPB-206ENST00000506516 FOXN1O15353 648 aa8.69□□□□□ -1.02
GYPB-206ENST00000506516 ASNSP08243 561 aa8.69□□□□□ -1.02
GYPB-206ENST00000506516 SLURP2P0DP57 97 aa8.69□□□□□ -1.02
GYPB-206ENST00000506516 CETPP11597 493 aa8.69□□□□□ -1.02
GYPB-206ENST00000506516 GJA5P36382 358 aa8.69□□□□□ -1.02
GYPB-206ENST00000506516 TDO2P48775 406 aa8.69□□□□□ -1.02
GYPB-206ENST00000506516 FOSBP53539 338 aa8.69□□□□□ -1.02
GYPB-206ENST00000506516 MFAP1P55081 439 aaKnown RBP8.69□□□□□ -1.02
GYPB-206ENST00000506516 HIC1Q14526 733 aa8.69□□□□□ -1.02
GYPB-206ENST00000506516 CERKLQ49MI3 558 aaPredicted RBP8.69□□□□□ -1.02
GYPB-206ENST00000506516 MCMDC2Q4G0Z9 681 aa8.69□□□□□ -1.02
GYPB-206ENST00000506516 TATDN1Q6P1N9 297 aa8.69□□□□□ -1.02
GYPB-206ENST00000506516 POTEBQ6S5H4 581 aa8.69□□□□□ -1.02
GYPB-206ENST00000506516 ZNF454Q8N9F8 522 aa8.69□□□□□ -1.02
GYPB-206ENST00000506516 SEC62Q99442 399 aaKnown RBP8.69□□□□□ -1.02
GYPB-206ENST00000506516 AS3MTQ9HBK9 375 aa8.69□□□□□ -1.02
GYPB-206ENST00000506516 CABP5Q9NP86 173 aa8.69□□□□□ -1.02
GYPB-206ENST00000506516 ARPP21Q9UBL0 812 aaPredicted RBP8.69□□□□□ -1.02
GYPB-206ENST00000506516 SWAP70Q9UH65 585 aa8.69□□□□□ -1.02
GYPB-206ENST00000506516 CCL15-CCL14A0A0B4J2E2 113 aa8.68□□□□□ -1.02
GYPB-206ENST00000506516 GSG1L2A8MUP6 293 aa8.68□□□□□ -1.02
GYPB-206ENST00000506516 MINDY4BA8MYZ0 360 aa8.68□□□□□ -1.02
GYPB-206ENST00000506516 M0R2C6 588 aa8.68□□□□□ -1.02
GYPB-206ENST00000506516 SDSP20132 328 aa8.68□□□□□ -1.02
GYPB-206ENST00000506516 LBX1P52954 281 aa8.68□□□□□ -1.02
GYPB-206ENST00000506516 PTGDRQ13258 359 aa8.68□□□□□ -1.02
GYPB-206ENST00000506516 CCL15Q16663 113 aa8.68□□□□□ -1.02
GYPB-206ENST00000506516 SBK1Q52WX2 424 aa8.68□□□□□ -1.02
GYPB-206ENST00000506516 TTC22Q5TAA0 569 aa8.68□□□□□ -1.02
GYPB-206ENST00000506516 C12orf60Q5U649 245 aa8.68□□□□□ -1.02
GYPB-206ENST00000506516 CTR9Q6PD62 1173 aa8.68□□□□□ -1.02
GYPB-206ENST00000506516 FASTKD5Q7L8L6 764 aaKnown RBP8.68□□□□□ -1.02
GYPB-206ENST00000506516 IFNL3Q8IZI9 196 aa8.68□□□□□ -1.02
GYPB-206ENST00000506516 CDHR5Q9HBB8 845 aa8.68□□□□□ -1.02
GYPB-206ENST00000506516 ZNF287Q9HBT7 754 aa8.68□□□□□ -1.02
GYPB-206ENST00000506516 PRDM10Q9NQV6 1147 aa8.68□□□□□ -1.02
GYPB-206ENST00000506516 KCNH4Q9UQ05 1017 aa8.68□□□□□ -1.02
GYPB-206ENST00000506516 AFG3L2Q9Y4W6 797 aa8.68□□□□□ -1.02
GYPB-206ENST00000506516 DOCK2Q92608 1830 aa8.68□□□□□ -1.02
GYPB-206ENST00000506516 TRIM75PA6NK02 468 aa8.67□□□□□ -1.02
GYPB-206ENST00000506516 SLC3A2P08195 630 aaKnown RBP8.67□□□□□ -1.02
GYPB-206ENST00000506516 HSPA8P11142 646 aaKnown RBP8.67□□□□□ -1.02
GYPB-206ENST00000506516 GABPAQ06546 454 aa8.67□□□□□ -1.02
GYPB-206ENST00000506516 SPP2Q13103 211 aa8.67□□□□□ -1.02
GYPB-206ENST00000506516 ABCB5Q2M3G0 1257 aa8.67□□□□□ -1.02
GYPB-206ENST00000506516 AK9Q5TCS8 1911 aa8.67□□□□□ -1.02
GYPB-206ENST00000506516 ZNF280CQ8ND82 737 aa8.67□□□□□ -1.02
GYPB-206ENST00000506516 ZDHHC16Q969W1 377 aa8.67□□□□□ -1.02
GYPB-206ENST00000506516 FAM227BQ96M60 508 aa8.67□□□□□ -1.02
GYPB-206ENST00000506516 PTPN18Q99952 460 aa8.67□□□□□ -1.02
GYPB-206ENST00000506516 NAPBQ9H115 298 aa8.67□□□□□ -1.02
GYPB-206ENST00000506516 DNAJC18Q9H819 358 aa8.67□□□□□ -1.02
GYPB-206ENST00000506516 MKNK2Q9HBH9 465 aa8.67□□□□□ -1.02
GYPB-206ENST00000506516 ZCCHC17Q9NP64 241 aaKnown RBP8.67□□□□□ -1.02
GYPB-206ENST00000506516 DIAPH3Q9NSV4 1193 aa8.67□□□□□ -1.02
GYPB-206ENST00000506516 TSKSQ9UJT2 592 aa8.67□□□□□ -1.02
GYPB-206ENST00000506516 MYO5AQ9Y4I1 1855 aaKnown RBP8.66□□□□□ -1.02
GYPB-206ENST00000506516 C19orf81C9J6K1 198 aa8.66□□□□□ -1.02
GYPB-206ENST00000506516 IGF2BP3O00425 579 aaKnown RBP eCLIP8.66□□□□□ -1.02
GYPB-206ENST00000506516 MPHOSPH10O00566 681 aaKnown RBP8.66□□□□□ -1.02
GYPB-206ENST00000506516 GDF11O95390 407 aa8.66□□□□□ -1.02
GYPB-206ENST00000506516 TBC1D8O95759 1140 aa8.66□□□□□ -1.02
GYPB-206ENST00000506516 GH2P01242 217 aa8.66□□□□□ -1.02
GYPB-206ENST00000506516 CYP2D6P10635 497 aa8.66□□□□□ -1.02
GYPB-206ENST00000506516 SHMT1P34896 483 aa8.66□□□□□ -1.02
GYPB-206ENST00000506516 CDK8P49336 464 aa8.66□□□□□ -1.02
GYPB-206ENST00000506516 MAP2K5Q13163 448 aa8.66□□□□□ -1.02
GYPB-206ENST00000506516 NMIQ13287 307 aaPredicted RBP8.66□□□□□ -1.02
GYPB-206ENST00000506516 RRP1BQ14684 758 aaKnown RBP8.66□□□□□ -1.02
GYPB-206ENST00000506516 RAB3GAP1Q15042 981 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms