RNA–Protein interactions for RNA: ENST00000506223.1

SMAD5-201, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-201ENST00000506223 ZNF438Q7Z4V0 828 aa8.33□□□□□ -1.08
SMAD5-201ENST00000506223 PNMA6FA0A0J9YX94 578 aa8.32□□□□□ -1.08
SMAD5-201ENST00000506223 LCE2BO14633 110 aa8.32□□□□□ -1.08
SMAD5-201ENST00000506223 XYLBO75191 536 aa8.32□□□□□ -1.08
SMAD5-201ENST00000506223 LDHBP07195 334 aaKnown RBP8.32□□□□□ -1.08
SMAD5-201ENST00000506223 CANXP27824 592 aaKnown RBP8.32□□□□□ -1.08
SMAD5-201ENST00000506223 PPP2R1AP30153 589 aa8.32□□□□□ -1.08
SMAD5-201ENST00000506223 IARSP41252 1262 aaKnown RBP8.32□□□□□ -1.08
SMAD5-201ENST00000506223 ORC1Q13415 861 aa8.32□□□□□ -1.08
SMAD5-201ENST00000506223 SLC39A6Q13433 755 aa8.32□□□□□ -1.08
SMAD5-201ENST00000506223 XKR5Q6UX68 686 aa8.32□□□□□ -1.08
SMAD5-201ENST00000506223 ZNF837Q96EG3 531 aaPredicted RBP8.32□□□□□ -1.08
SMAD5-201ENST00000506223 MASTLQ96GX5 879 aa8.32□□□□□ -1.08
SMAD5-201ENST00000506223 GMCL1Q96IK5 515 aa8.32□□□□□ -1.08
SMAD5-201ENST00000506223 HHIPL1Q96JK4 782 aa8.32□□□□□ -1.08
SMAD5-201ENST00000506223 LGR6Q9HBX8 967 aa8.32□□□□□ -1.08
SMAD5-201ENST00000506223 KCNH4Q9UQ05 1017 aa8.32□□□□□ -1.08
SMAD5-201ENST00000506223 UBR2Q8IWV8 1755 aa8.32□□□□□ -1.08
SMAD5-201ENST00000506223 MAPK8IP3Q9UPT6 1336 aa8.31□□□□□ -1.08
SMAD5-201ENST00000506223 A0A0C4DFX4 3053 aa8.31□□□□□ -1.08
SMAD5-201ENST00000506223 NPHP1O15259 732 aa8.31□□□□□ -1.08
SMAD5-201ENST00000506223 BNIP3LO60238 219 aa8.31□□□□□ -1.08
SMAD5-201ENST00000506223 STARD3NLO95772 234 aa8.31□□□□□ -1.08
SMAD5-201ENST00000506223 NEFLP07196 543 aa8.31□□□□□ -1.08
SMAD5-201ENST00000506223 ATP2B2Q01814 1243 aa8.31□□□□□ -1.08
SMAD5-201ENST00000506223 TNP2Q05952 138 aa8.31□□□□□ -1.08
SMAD5-201ENST00000506223 SFSWAPQ12872 951 aaKnown RBP8.31□□□□□ -1.08
SMAD5-201ENST00000506223 ENOX2Q16206 610 aaKnown RBP8.31□□□□□ -1.08
SMAD5-201ENST00000506223 SYNE4Q8N205 404 aa8.31□□□□□ -1.08
SMAD5-201ENST00000506223 CNBD1Q8NA66 436 aa8.31□□□□□ -1.08
SMAD5-201ENST00000506223 CSRNP1Q96S65 589 aa8.31□□□□□ -1.08
SMAD5-201ENST00000506223 PNNQ9H307 717 aaKnown RBP8.31□□□□□ -1.08
SMAD5-201ENST00000506223 ELP3Q9H9T3 547 aa8.31□□□□□ -1.08
SMAD5-201ENST00000506223 C11orf16Q9NQ32 467 aa8.31□□□□□ -1.08
SMAD5-201ENST00000506223 POLR2AP24928 1970 aaKnown RBP8.31□□□□□ -1.08
SMAD5-201ENST00000506223 SNED1Q8TER0 1413 aa8.3□□□□□ -1.08
SMAD5-201ENST00000506223 DLL1O00548 723 aa8.3□□□□□ -1.08
SMAD5-201ENST00000506223 EIF1AYO14602 144 aaKnown RBP8.3□□□□□ -1.08
SMAD5-201ENST00000506223 TNFRSF21O75509 655 aa8.3□□□□□ -1.08
SMAD5-201ENST00000506223 EGFRP00533 1210 aa8.3□□□□□ -1.08
SMAD5-201ENST00000506223 MAPTP10636 758 aaKnown RBP8.3□□□□□ -1.08
SMAD5-201ENST00000506223 EIF5P55010 431 aaKnown RBP8.3□□□□□ -1.08
SMAD5-201ENST00000506223 FGD1P98174 961 aa8.3□□□□□ -1.08
SMAD5-201ENST00000506223 LAMC2Q13753 1193 aa8.3□□□□□ -1.08
SMAD5-201ENST00000506223 USP50Q70EL3 339 aaPredicted RBP8.3□□□□□ -1.08
SMAD5-201ENST00000506223 CTU1Q7Z7A3 348 aaKnown RBP8.3□□□□□ -1.08
SMAD5-201ENST00000506223 SNX29Q8TEQ0 813 aa8.3□□□□□ -1.08
SMAD5-201ENST00000506223 GTPBP3Q969Y2 492 aaKnown RBP8.3□□□□□ -1.08
SMAD5-201ENST00000506223 MRRFQ96E11 262 aaKnown RBP8.3□□□□□ -1.08
SMAD5-201ENST00000506223 ABHD17AQ96GS6 310 aa8.3□□□□□ -1.08
SMAD5-201ENST00000506223 GLIS2Q9BZE0 524 aaPredicted RBP8.3□□□□□ -1.08
SMAD5-201ENST00000506223 ZNF408Q9H9D4 720 aa8.3□□□□□ -1.08
SMAD5-201ENST00000506223 NDFIP2Q9NV92 336 aa8.3□□□□□ -1.08
SMAD5-201ENST00000506223 FOXD3Q9UJU5 478 aaPredicted RBP8.3□□□□□ -1.08
SMAD5-201ENST00000506223 COL3A1P02461 1466 aaPredicted RBP8.3□□□□□ -1.08
SMAD5-201ENST00000506223 BTBD11A6QL63 1104 aa8.29□□□□□ -1.08
SMAD5-201ENST00000506223 PRPF40AO75400 957 aaKnown RBP8.29□□□□□ -1.08
SMAD5-201ENST00000506223 TRPA1O75762 1119 aa8.29□□□□□ -1.08
SMAD5-201ENST00000506223 ST5P78524 1137 aa8.29□□□□□ -1.08
SMAD5-201ENST00000506223 NOGQ13253 232 aa8.29□□□□□ -1.08
SMAD5-201ENST00000506223 FMNL2Q96PY5 1086 aa8.29□□□□□ -1.08
SMAD5-201ENST00000506223 SETDB2Q96T68 719 aa8.29□□□□□ -1.08
SMAD5-201ENST00000506223 DNAJC25Q9H1X3 360 aa8.29□□□□□ -1.08
SMAD5-201ENST00000506223 SAGE1Q9NXZ1 904 aa8.29□□□□□ -1.08
SMAD5-201ENST00000506223 TMEM63CQ9P1W3 806 aa8.29□□□□□ -1.08
SMAD5-201ENST00000506223 KIAA1522Q9P206 1035 aaPredicted RBP8.29□□□□□ -1.08
SMAD5-201ENST00000506223 MRC1P22897 1456 aa8.28□□□□□ -1.08
SMAD5-201ENST00000506223 FAM155AB1AL88 458 aaPredicted RBP8.28□□□□□ -1.08
SMAD5-201ENST00000506223 CPNE3O75131 537 aaKnown RBP8.28□□□□□ -1.08
SMAD5-201ENST00000506223 PPFIA3O75145 1194 aa8.28□□□□□ -1.08
SMAD5-201ENST00000506223 NPR1P16066 1061 aa8.28□□□□□ -1.08
SMAD5-201ENST00000506223 EIF6P56537 245 aaKnown RBP8.28□□□□□ -1.08
SMAD5-201ENST00000506223 DDX10Q13206 875 aaKnown RBP8.28□□□□□ -1.08
SMAD5-201ENST00000506223 ALG1LQ6GMV1 187 aa8.28□□□□□ -1.08
SMAD5-201ENST00000506223 ZNF790Q6PG37 636 aa8.28□□□□□ -1.08
SMAD5-201ENST00000506223 DLK2Q6UY11 383 aa8.28□□□□□ -1.08
SMAD5-201ENST00000506223 RTKN2Q8IZC4 609 aa8.28□□□□□ -1.08
SMAD5-201ENST00000506223 TEX13AQ9BXU3 409 aaPredicted RBP8.28□□□□□ -1.08
SMAD5-201ENST00000506223 BCL11AQ9H165 835 aa8.28□□□□□ -1.08
SMAD5-201ENST00000506223 RNF186Q9NXI6 227 aa8.28□□□□□ -1.08
SMAD5-201ENST00000506223 MARK1Q9P0L2 795 aa8.28□□□□□ -1.08
SMAD5-201ENST00000506223 ATXN7L1Q9ULK2 861 aaPredicted RBP8.28□□□□□ -1.08
SMAD5-201ENST00000506223 HTTP42858 3142 aa8.28□□□□□ -1.08
SMAD5-201ENST00000506223 COL6A3P12111 3177 aa8.28□□□□□ -1.08
SMAD5-201ENST00000506223 CENPFP49454 3210 aa8.27□□□□□ -1.08
SMAD5-201ENST00000506223 A0A087WZG4 1122 aa8.27□□□□□ -1.09
SMAD5-201ENST00000506223 CDC14CA4D256 554 aa8.27□□□□□ -1.09
SMAD5-201ENST00000506223 PHACTR2O75167 634 aa8.27□□□□□ -1.09
SMAD5-201ENST00000506223 SASH3O75995 380 aa8.27□□□□□ -1.09
SMAD5-201ENST00000506223 HUNKP57058 714 aa8.27□□□□□ -1.09
SMAD5-201ENST00000506223 CCINQ13939 588 aa8.27□□□□□ -1.09
SMAD5-201ENST00000506223 RALBP1Q15311 655 aa8.27□□□□□ -1.09
SMAD5-201ENST00000506223 KRT25Q7Z3Z0 450 aa8.27□□□□□ -1.09
SMAD5-201ENST00000506223 SLC51AQ86UW1 340 aa8.27□□□□□ -1.09
SMAD5-201ENST00000506223 JDP2Q8WYK2 163 aa8.27□□□□□ -1.09
SMAD5-201ENST00000506223 PHACTR3Q96KR7 559 aa8.27□□□□□ -1.09
SMAD5-201ENST00000506223 DUSP9Q99956 384 aaKnown RBP8.27□□□□□ -1.09
SMAD5-201ENST00000506223 GSX2Q9BZM3 304 aa8.27□□□□□ -1.09
SMAD5-201ENST00000506223 ABI2Q9NYB9 513 aaPredicted RBP8.27□□□□□ -1.09
SMAD5-201ENST00000506223 HCN2Q9UL51 889 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms