RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 ROBO3Q96MS0 1386 aa13.64□□□□□ -0.23
KDM3B-203ENST00000505756 CCDC85CA6NKD9 419 aa13.64□□□□□ -0.23
KDM3B-203ENST00000505756 SMIM22K7EJ46 135 aa13.64□□□□□ -0.23
KDM3B-203ENST00000505756 GNRH1P01148 92 aa13.64□□□□□ -0.23
KDM3B-203ENST00000505756 PDE4AP27815 886 aa13.64□□□□□ -0.23
KDM3B-203ENST00000505756 HOXA7P31268 230 aaPredicted RBP13.64□□□□□ -0.23
KDM3B-203ENST00000505756 GUCY1A2P33402 732 aa13.64□□□□□ -0.23
KDM3B-203ENST00000505756 USP14P54578 494 aa13.64□□□□□ -0.23
KDM3B-203ENST00000505756 CAP1Q01518 475 aa13.64□□□□□ -0.23
KDM3B-203ENST00000505756 SEPT2Q15019 361 aa13.64□□□□□ -0.23
KDM3B-203ENST00000505756 IFNL3Q8IZI9 196 aa13.64□□□□□ -0.23
KDM3B-203ENST00000505756 RILPL2Q969X0 211 aa13.64□□□□□ -0.23
KDM3B-203ENST00000505756 C12orf42Q96LP6 360 aa13.64□□□□□ -0.23
KDM3B-203ENST00000505756 KIAA1683Q9H0B3 1180 aa13.64□□□□□ -0.23
KDM3B-203ENST00000505756 HELLSQ9NRZ9 838 aa13.64□□□□□ -0.23
KDM3B-203ENST00000505756 MINDY4BA8MYZ0 360 aa13.63□□□□□ -0.23
KDM3B-203ENST00000505756 AKR1B1P15121 316 aa13.63□□□□□ -0.23
KDM3B-203ENST00000505756 ASCC2Q9H1I8 757 aaPredicted RBP13.63□□□□□ -0.23
KDM3B-203ENST00000505756 EMILIN3Q9NT22 766 aa13.63□□□□□ -0.23
KDM3B-203ENST00000505756 PTPN22Q9Y2R2 807 aa13.63□□□□□ -0.23
KDM3B-203ENST00000505756 PSMC4P43686 418 aa13.62□□□□□ -0.23
KDM3B-203ENST00000505756 GCLCP48506 637 aaPredicted RBP13.62□□□□□ -0.23
KDM3B-203ENST00000505756 IRX3P78415 501 aaPredicted RBP13.62□□□□□ -0.23
KDM3B-203ENST00000505756 FAM110CQ1W6H9 321 aa13.62□□□□□ -0.23
KDM3B-203ENST00000505756 MCMDC2Q4G0Z9 681 aa13.62□□□□□ -0.23
KDM3B-203ENST00000505756 CCDC129Q6ZRS4 1044 aa13.62□□□□□ -0.23
KDM3B-203ENST00000505756 ACER1Q8TDN7 264 aa13.62□□□□□ -0.23
KDM3B-203ENST00000505756 ARHGAP39Q9C0H5 1083 aa13.62□□□□□ -0.23
KDM3B-203ENST00000505756 NAPBQ9H115 298 aa13.62□□□□□ -0.23
KDM3B-203ENST00000505756 ZNF287Q9HBT7 754 aa13.62□□□□□ -0.23
KDM3B-203ENST00000505756 MYH8P13535 1937 aa13.61□□□□□ -0.23
KDM3B-203ENST00000505756 FMNL1O95466 1100 aaPredicted RBP13.61□□□□□ -0.23
KDM3B-203ENST00000505756 PRMT2P55345 433 aa13.61□□□□□ -0.23
KDM3B-203ENST00000505756 ZYXQ15942 572 aaKnown RBP13.61□□□□□ -0.23
KDM3B-203ENST00000505756 ANKRD13CQ8N6S4 541 aa13.61□□□□□ -0.23
KDM3B-203ENST00000505756 FAM227BQ96M60 508 aa13.61□□□□□ -0.23
KDM3B-203ENST00000505756 SH2D4AQ9H788 454 aa13.61□□□□□ -0.23
KDM3B-203ENST00000505756 MKNK2Q9HBH9 465 aa13.61□□□□□ -0.23
KDM3B-203ENST00000505756 ARHGEF10LQ9HCE6 1279 aa13.61□□□□□ -0.23
KDM3B-203ENST00000505756 A0A0D9SFI3 127 aa13.6□□□□□ -0.23
KDM3B-203ENST00000505756 A0A1W2PRG0 241 aa13.6□□□□□ -0.23
KDM3B-203ENST00000505756 FOXP2O15409 715 aa13.6□□□□□ -0.23
KDM3B-203ENST00000505756 SLC3A2P08195 630 aaKnown RBP13.6□□□□□ -0.23
KDM3B-203ENST00000505756 VCAM1P19320 739 aa13.6□□□□□ -0.23
KDM3B-203ENST00000505756 SDSP20132 328 aa13.6□□□□□ -0.23
KDM3B-203ENST00000505756 HOXD10P28358 340 aa13.6□□□□□ -0.23
KDM3B-203ENST00000505756 CTGFP29279 349 aa13.6□□□□□ -0.23
KDM3B-203ENST00000505756 FCGRTP55899 365 aa13.6□□□□□ -0.23
KDM3B-203ENST00000505756 ICA1Q05084 483 aa13.6□□□□□ -0.23
KDM3B-203ENST00000505756 NMIQ13287 307 aaPredicted RBP13.6□□□□□ -0.23
KDM3B-203ENST00000505756 GTF3C2Q8WUA4 911 aaPredicted RBP13.6□□□□□ -0.23
KDM3B-203ENST00000505756 TRIM47Q96LD4 638 aa13.6□□□□□ -0.23
KDM3B-203ENST00000505756 KANSL2Q9H9L4 492 aa13.6□□□□□ -0.23
KDM3B-203ENST00000505756 HTTP42858 3142 aa13.6□□□□□ -0.23
KDM3B-203ENST00000505756 USP17L15C9J2P7 530 aa13.59□□□□□ -0.23
KDM3B-203ENST00000505756 USP17L13C9JLJ4 530 aa13.59□□□□□ -0.23
KDM3B-203ENST00000505756 USP17L11C9JVI0 530 aa13.59□□□□□ -0.23
KDM3B-203ENST00000505756 USP17L18D6R9N7 530 aa13.59□□□□□ -0.23
KDM3B-203ENST00000505756 USP17L22D6RA61 530 aa13.59□□□□□ -0.23
KDM3B-203ENST00000505756 USP17L17D6RBQ6 530 aa13.59□□□□□ -0.23
KDM3B-203ENST00000505756 USP17L19D6RCP7 530 aa13.59□□□□□ -0.23
KDM3B-203ENST00000505756 USP17L20D6RJB6 530 aa13.59□□□□□ -0.23
KDM3B-203ENST00000505756 HIP1O00291 1037 aa13.59□□□□□ -0.23
KDM3B-203ENST00000505756 RASA1P20936 1047 aa13.59□□□□□ -0.23
KDM3B-203ENST00000505756 MFAP1P55081 439 aaKnown RBP13.59□□□□□ -0.23
KDM3B-203ENST00000505756 HERVK_113P62684 666 aa13.59□□□□□ -0.23
KDM3B-203ENST00000505756 PDE4BQ07343 736 aa13.59□□□□□ -0.23
KDM3B-203ENST00000505756 PPARAQ07869 468 aa13.59□□□□□ -0.23
KDM3B-203ENST00000505756 USP17L24Q0WX57 530 aa13.59□□□□□ -0.23
KDM3B-203ENST00000505756 VPS53Q5VIR6 699 aa13.59□□□□□ -0.23
KDM3B-203ENST00000505756 STK11IPQ8N1F8 1099 aa13.59□□□□□ -0.23
KDM3B-203ENST00000505756 P2RX7Q99572 595 aaKnown RBP13.59□□□□□ -0.23
KDM3B-203ENST00000505756 SRRDQ9UH36 339 aa13.59□□□□□ -0.23
KDM3B-203ENST00000505756 TMX2Q9Y320 296 aa13.59□□□□□ -0.23
KDM3B-203ENST00000505756 PTCH2Q9Y6C5 1203 aa13.59□□□□□ -0.23
KDM3B-203ENST00000505756 ZSWIM8A7E2V4 1837 aa13.59□□□□□ -0.23
KDM3B-203ENST00000505756 ECM2O94769 699 aaPredicted RBP13.58□□□□□ -0.24
KDM3B-203ENST00000505756 ALX1Q15699 326 aa13.58□□□□□ -0.24
KDM3B-203ENST00000505756 TTC22Q5TAA0 569 aa13.58□□□□□ -0.24
KDM3B-203ENST00000505756 CATSPERGQ6ZRH7 1159 aa13.58□□□□□ -0.24
KDM3B-203ENST00000505756 CLEC10AQ8IUN9 316 aa13.58□□□□□ -0.24
KDM3B-203ENST00000505756 SIAH1Q8IUQ4 282 aa13.58□□□□□ -0.24
KDM3B-203ENST00000505756 ZNF444Q8N0Y2 327 aaPredicted RBP13.58□□□□□ -0.24
KDM3B-203ENST00000505756 LPAR1Q92633 364 aa13.58□□□□□ -0.24
KDM3B-203ENST00000505756 RPAP3Q9H6T3 665 aaPredicted RBP13.58□□□□□ -0.24
KDM3B-203ENST00000505756 DIAPH3Q9NSV4 1193 aa13.58□□□□□ -0.24
KDM3B-203ENST00000505756 MORF4L1Q9UBU8 362 aa13.58□□□□□ -0.24
KDM3B-203ENST00000505756 CCDC171Q6TFL3 1326 aa13.58□□□□□ -0.24
KDM3B-203ENST00000505756 TNPO2O14787 897 aaKnown RBP13.57□□□□□ -0.24
KDM3B-203ENST00000505756 PRDM1O75626 825 aa13.57□□□□□ -0.24
KDM3B-203ENST00000505756 HSPD1P10809 573 aaKnown RBP13.57□□□□□ -0.24
KDM3B-203ENST00000505756 EEF2P13639 858 aaKnown RBP13.57□□□□□ -0.24
KDM3B-203ENST00000505756 BMP2KLQ5H9B9 411 aa13.57□□□□□ -0.24
KDM3B-203ENST00000505756 ZNF589Q86UQ0 364 aaPredicted RBP13.57□□□□□ -0.24
KDM3B-203ENST00000505756 SKAP1Q86WV1 359 aa13.57□□□□□ -0.24
KDM3B-203ENST00000505756 GPRC5AQ8NFJ5 357 aa13.57□□□□□ -0.24
KDM3B-203ENST00000505756 ARMC5Q96C12 935 aa13.57□□□□□ -0.24
KDM3B-203ENST00000505756 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.57□□□□□ -0.24
KDM3B-203ENST00000505756 VCPKMTQ9H867 229 aa13.57□□□□□ -0.24
KDM3B-203ENST00000505756 ZMYM6O95789 1325 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms