RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 RPTORQ8N122 1335 aa7.18□□□□□ -1.26
GYPB-205ENST00000505583 LAMA3Q16787 3333 aa7.17□□□□□ -1.26
GYPB-205ENST00000505583 CNMDO75829 334 aa7.17□□□□□ -1.26
GYPB-205ENST00000505583 BAG3O95817 575 aa7.17□□□□□ -1.26
GYPB-205ENST00000505583 GH2P01242 217 aa7.17□□□□□ -1.26
GYPB-205ENST00000505583 CYP7A1P22680 504 aa7.17□□□□□ -1.26
GYPB-205ENST00000505583 CCND3P30281 292 aaPredicted RBP7.17□□□□□ -1.26
GYPB-205ENST00000505583 IRX3P78415 501 aaPredicted RBP7.17□□□□□ -1.26
GYPB-205ENST00000505583 PABPC4Q13310 644 aaKnown RBP eCLIP7.17□□□□□ -1.262e-6■■□□□ 11.4
GYPB-205ENST00000505583 CCDC158Q5M9N0 1113 aa7.17□□□□□ -1.26
GYPB-205ENST00000505583 ZKSCAN2Q63HK3 967 aa7.17□□□□□ -1.26
GYPB-205ENST00000505583 CRACR2BQ8N4Y2 399 aaPredicted RBP7.17□□□□□ -1.26
GYPB-205ENST00000505583 GPRC5AQ8NFJ5 357 aa7.17□□□□□ -1.26
GYPB-205ENST00000505583 USP6NLQ92738 828 aa7.17□□□□□ -1.26
GYPB-205ENST00000505583 ZNF512BQ96KM6 892 aaPredicted RBP7.17□□□□□ -1.26
GYPB-205ENST00000505583 GDF15Q99988 308 aa7.17□□□□□ -1.26
GYPB-205ENST00000505583 NOL10Q9BSC4 688 aaKnown RBP7.17□□□□□ -1.26
GYPB-205ENST00000505583 TBC1D2Q9BYX2 928 aa7.17□□□□□ -1.26
GYPB-205ENST00000505583 HMX1Q9NP08 348 aaPredicted RBP7.17□□□□□ -1.26
GYPB-205ENST00000505583 TMOD4Q9NZQ9 345 aa7.17□□□□□ -1.26
GYPB-205ENST00000505583 OGDHLQ9ULD0 1010 aa7.17□□□□□ -1.26
GYPB-205ENST00000505583 NAV1Q8NEY1 1877 aa7.17□□□□□ -1.26
GYPB-205ENST00000505583 RLFQ13129 1914 aa7.17□□□□□ -1.26
GYPB-205ENST00000505583 C19orf81C9J6K1 198 aa7.16□□□□□ -1.26
GYPB-205ENST00000505583 USP17L10C9JJH3 530 aa7.16□□□□□ -1.26
GYPB-205ENST00000505583 IDH1O75874 414 aaKnown RBP7.16□□□□□ -1.26
GYPB-205ENST00000505583 GABBR2O75899 941 aa7.16□□□□□ -1.26
GYPB-205ENST00000505583 PLCG2P16885 1265 aa7.16□□□□□ -1.26
GYPB-205ENST00000505583 ERVK-9P63128 1117 aa7.16□□□□□ -1.26
GYPB-205ENST00000505583 ERVK-24P63145 666 aa7.16□□□□□ -1.26
GYPB-205ENST00000505583 CACNB2Q08289 660 aaPredicted RBP7.16□□□□□ -1.26
GYPB-205ENST00000505583 OS9Q13438 667 aaPredicted RBP7.16□□□□□ -1.26
GYPB-205ENST00000505583 PDAP1Q13442 181 aaKnown RBP7.16□□□□□ -1.26
GYPB-205ENST00000505583 ZYXQ15942 572 aaKnown RBP7.16□□□□□ -1.26
GYPB-205ENST00000505583 MORN1Q5T089 497 aa7.16□□□□□ -1.26
GYPB-205ENST00000505583 LHX8Q68G74 356 aa7.16□□□□□ -1.26
GYPB-205ENST00000505583 TATDN1Q6P1N9 297 aa7.16□□□□□ -1.26
GYPB-205ENST00000505583 GPR142Q7Z601 462 aa7.16□□□□□ -1.26
GYPB-205ENST00000505583 MAGEB6Q8N7X4 407 aa7.16□□□□□ -1.26
GYPB-205ENST00000505583 ZNF579Q8NAF0 562 aaKnown RBP7.16□□□□□ -1.26
GYPB-205ENST00000505583 ANKLE1Q8NAG6 615 aa7.16□□□□□ -1.26
GYPB-205ENST00000505583 ACER1Q8TDN7 264 aa7.16□□□□□ -1.26
GYPB-205ENST00000505583 PAGR1Q9BTK6 254 aa7.16□□□□□ -1.26
GYPB-205ENST00000505583 NBPF3Q9H094 633 aa7.16□□□□□ -1.26
GYPB-205ENST00000505583 FLRT1Q9NZU1 646 aa7.16□□□□□ -1.26
GYPB-205ENST00000505583 NOP58Q9Y2X3 529 aaKnown RBP7.16□□□□□ -1.26
GYPB-205ENST00000505583 PARP14Q460N5 1801 aa7.15□□□□□ -1.26
GYPB-205ENST00000505583 A0A1W2PPC1 479 aa7.15□□□□□ -1.26
GYPB-205ENST00000505583 SMIM22K7EJ46 135 aa7.15□□□□□ -1.26
GYPB-205ENST00000505583 MAP3K13O43283 966 aa7.15□□□□□ -1.26
GYPB-205ENST00000505583 COL6A1P12109 1028 aa7.15□□□□□ -1.26
GYPB-205ENST00000505583 XRCC5P13010 732 aaKnown RBP7.15□□□□□ -1.26
GYPB-205ENST00000505583 GUCY1A2P33402 732 aa7.15□□□□□ -1.26
GYPB-205ENST00000505583 BMP8BP34820 402 aa7.15□□□□□ -1.26
GYPB-205ENST00000505583 SHMT1P34896 483 aa7.15□□□□□ -1.26
GYPB-205ENST00000505583 MAGEA10P43363 369 aaPredicted RBP7.15□□□□□ -1.26
GYPB-205ENST00000505583 PSEN1P49768 467 aa7.15□□□□□ -1.26
GYPB-205ENST00000505583 PLCD1P51178 756 aa7.15□□□□□ -1.26
GYPB-205ENST00000505583 Q7L0L9 218 aa7.15□□□□□ -1.26
GYPB-205ENST00000505583 KIF12Q96FN5 646 aa7.15□□□□□ -1.26
GYPB-205ENST00000505583 NUDT12Q9BQG2 462 aa7.15□□□□□ -1.26
GYPB-205ENST00000505583 RIOK1Q9BRS2 568 aaKnown RBP7.15□□□□□ -1.26
GYPB-205ENST00000505583 C11orf49Q9H6J7 331 aa7.15□□□□□ -1.26
GYPB-205ENST00000505583 BTBD7Q9P203 1132 aa7.15□□□□□ -1.26
GYPB-205ENST00000505583 EXOC6BQ9Y2D4 811 aa7.15□□□□□ -1.26
GYPB-205ENST00000505583 A0A0G2JMZ2 1700 aa7.15□□□□□ -1.27
GYPB-205ENST00000505583 MYH8P13535 1937 aa7.15□□□□□ -1.27
GYPB-205ENST00000505583 HLA-DOAP06340 250 aa7.14□□□□□ -1.27
GYPB-205ENST00000505583 CD44P16070 742 aaKnown RBP7.14□□□□□ -1.27
GYPB-205ENST00000505583 ZKSCAN1P17029 563 aaPredicted RBP7.14□□□□□ -1.27
GYPB-205ENST00000505583 CAPN2P17655 700 aa7.14□□□□□ -1.27
GYPB-205ENST00000505583 VCAM1P19320 739 aa7.14□□□□□ -1.27
GYPB-205ENST00000505583 MAPK4P31152 587 aa7.14□□□□□ -1.27
GYPB-205ENST00000505583 USP5P45974 858 aa7.14□□□□□ -1.27
GYPB-205ENST00000505583 RAB3GAP1Q15042 981 aa7.14□□□□□ -1.27
GYPB-205ENST00000505583 LRRC26Q2I0M4 334 aa7.14□□□□□ -1.27
GYPB-205ENST00000505583 SLFNL1Q499Z3 407 aa7.14□□□□□ -1.27
GYPB-205ENST00000505583 KIAA1755Q5JYT7 1200 aa7.14□□□□□ -1.27
GYPB-205ENST00000505583 CEP85Q6P2H3 762 aa7.14□□□□□ -1.27
GYPB-205ENST00000505583 USP17L2Q6R6M4 530 aa7.14□□□□□ -1.27
GYPB-205ENST00000505583 PLEKHH3Q7Z736 793 aa7.14□□□□□ -1.27
GYPB-205ENST00000505583 ITPRIPQ8IWB1 547 aa7.14□□□□□ -1.27
GYPB-205ENST00000505583 PANK1Q8TE04 598 aa7.14□□□□□ -1.27
GYPB-205ENST00000505583 SOCS4Q8WXH5 440 aa7.14□□□□□ -1.27
GYPB-205ENST00000505583 C12orf42Q96LP6 360 aa7.14□□□□□ -1.27
GYPB-205ENST00000505583 TRIM34Q9BYJ4 488 aa7.14□□□□□ -1.27
GYPB-205ENST00000505583 IL1RAPL2Q9NP60 686 aa7.14□□□□□ -1.27
GYPB-205ENST00000505583 WDR70Q9NW82 654 aa7.14□□□□□ -1.27
GYPB-205ENST00000505583 BAZ2AQ9UIF9 1905 aaKnown RBP7.14□□□□□ -1.27
GYPB-205ENST00000505583 SERPINB13Q9UIV8 391 aa7.14□□□□□ -1.27
GYPB-205ENST00000505583 COL11A1P12107 1806 aaPredicted RBP7.13□□□□□ -1.27
GYPB-205ENST00000505583 LTBP2Q14767 1821 aa7.13□□□□□ -1.27
GYPB-205ENST00000505583 COL6A3P12111 3177 aa7.13□□□□□ -1.27
GYPB-205ENST00000505583 A0A1W2PRG0 241 aa7.13□□□□□ -1.27
GYPB-205ENST00000505583 SPDYE16A6NNV3 312 aaPredicted RBP7.13□□□□□ -1.27
GYPB-205ENST00000505583 USP17L15C9J2P7 530 aa7.13□□□□□ -1.27
GYPB-205ENST00000505583 USP17L13C9JLJ4 530 aa7.13□□□□□ -1.27
GYPB-205ENST00000505583 USP17L11C9JVI0 530 aa7.13□□□□□ -1.27
GYPB-205ENST00000505583 USP17L18D6R9N7 530 aa7.13□□□□□ -1.27
GYPB-205ENST00000505583 USP17L22D6RA61 530 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 212.3 ms