RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 PFKFB1P16118 471 aa13.02□□□□□ -0.32
NFKB1-205ENST00000505458 MPNDQ8N594 471 aa13.02□□□□□ -0.32
NFKB1-205ENST00000505458 CNTNAP5Q8WYK1 1306 aa13.02□□□□□ -0.32
NFKB1-205ENST00000505458 MYH1P12882 1939 aa13.02□□□□□ -0.32
NFKB1-205ENST00000505458 ZNF202O95125 648 aa13.02□□□□□ -0.33
NFKB1-205ENST00000505458 SH3RF3Q8TEJ3 882 aaPredicted RBP13.02□□□□□ -0.33
NFKB1-205ENST00000505458 FERMT2Q96AC1 680 aa13.02□□□□□ -0.33
NFKB1-205ENST00000505458 AIFM3Q96NN9 605 aa13.02□□□□□ -0.33
NFKB1-205ENST00000505458 ZC3H12CQ9C0D7 883 aaKnown RBP13.02□□□□□ -0.33
NFKB1-205ENST00000505458 PLIN4Q96Q06 1357 aa13.02□□□□□ -0.33
NFKB1-205ENST00000505458 TRIM75PA6NK02 468 aa13.02□□□□□ -0.33
NFKB1-205ENST00000505458 SMTNL1A8MU46 457 aa13.02□□□□□ -0.33
NFKB1-205ENST00000505458 APBA3O96018 575 aa13.02□□□□□ -0.33
NFKB1-205ENST00000505458 TSPY3P0CV98 308 aa13.02□□□□□ -0.33
NFKB1-205ENST00000505458 TSPY8P0CW00 308 aa13.02□□□□□ -0.33
NFKB1-205ENST00000505458 NDUFA8P51970 172 aa13.02□□□□□ -0.33
NFKB1-205ENST00000505458 GRM4Q14833 912 aa13.02□□□□□ -0.33
NFKB1-205ENST00000505458 CC2D2BQ6DHV5 1058 aa13.02□□□□□ -0.33
NFKB1-205ENST00000505458 STYK1Q6J9G0 422 aa13.02□□□□□ -0.33
NFKB1-205ENST00000505458 C16orf86Q6ZW13 317 aa13.02□□□□□ -0.33
NFKB1-205ENST00000505458 SCG2P13521 617 aa13.01□□□□□ -0.33
NFKB1-205ENST00000505458 CCDC12Q8WUD4 166 aaPredicted RBP13.01□□□□□ -0.33
NFKB1-205ENST00000505458 hCG_1984214I3L0E3 225 aa13.01□□□□□ -0.33
NFKB1-205ENST00000505458 PTPREP23469 700 aa13.01□□□□□ -0.33
NFKB1-205ENST00000505458 TFAP4Q01664 338 aa13.01□□□□□ -0.33
NFKB1-205ENST00000505458 ZNF713Q8N859 430 aaPredicted RBP13.01□□□□□ -0.33
NFKB1-205ENST00000505458 CYP2D7A0A087X1C5 515 aa13.01□□□□□ -0.33
NFKB1-205ENST00000505458 A0A1B0GVL5 298 aa13.01□□□□□ -0.33
NFKB1-205ENST00000505458 PFKFB3Q16875 520 aaPredicted RBP13.01□□□□□ -0.33
NFKB1-205ENST00000505458 PROM2Q8N271 834 aa13.01□□□□□ -0.33
NFKB1-205ENST00000505458 MRIQ9BWK5 157 aa13.01□□□□□ -0.33
NFKB1-205ENST00000505458 SWAP70Q9UH65 585 aa13.01□□□□□ -0.33
NFKB1-205ENST00000505458 SRPRBQ9Y5M8 271 aaKnown RBP13.01□□□□□ -0.33
NFKB1-205ENST00000505458 BTBD18B2RXH4 712 aa13□□□□□ -0.33
NFKB1-205ENST00000505458 PPFIA3O75145 1194 aa13□□□□□ -0.33
NFKB1-205ENST00000505458 PRDM1O75626 825 aa13□□□□□ -0.33
NFKB1-205ENST00000505458 DNAJC25Q9H1X3 360 aa13□□□□□ -0.33
NFKB1-205ENST00000505458 POLLQ9UGP5 575 aa13□□□□□ -0.33
NFKB1-205ENST00000505458 DACH1Q9UI36 760 aa13□□□□□ -0.33
NFKB1-205ENST00000505458 RXRBP28702 533 aa13□□□□□ -0.33
NFKB1-205ENST00000505458 NLRP12P59046 1061 aa13□□□□□ -0.33
NFKB1-205ENST00000505458 CT47A1Q5JQC4 288 aaPredicted RBP13□□□□□ -0.33
NFKB1-205ENST00000505458 DPP8Q6V1X1 898 aaPredicted RBP13□□□□□ -0.33
NFKB1-205ENST00000505458 PNMA1Q8ND90 353 aa13□□□□□ -0.33
NFKB1-205ENST00000505458 NEDD1Q8NHV4 660 aa13□□□□□ -0.33
NFKB1-205ENST00000505458 TGFBRAP1Q8WUH2 860 aa13□□□□□ -0.33
NFKB1-205ENST00000505458 RTN4Q9NQC3 1192 aaKnown RBP13□□□□□ -0.33
NFKB1-205ENST00000505458 NEMFO60524 1076 aa13□□□□□ -0.33
NFKB1-205ENST00000505458 USP17L8P0C7I0 530 aa13□□□□□ -0.33
NFKB1-205ENST00000505458 PKN1Q16512 942 aa13□□□□□ -0.33
NFKB1-205ENST00000505458 COL23A1Q86Y22 540 aaPredicted RBP13□□□□□ -0.33
NFKB1-205ENST00000505458 MRFAP1L1Q96HT8 127 aa13□□□□□ -0.33
NFKB1-205ENST00000505458 COL11A2P13942 1736 aaPredicted RBP12.99□□□□□ -0.33
NFKB1-205ENST00000505458 TERF1P54274 439 aa12.99□□□□□ -0.33
NFKB1-205ENST00000505458 HHIPL2Q6UWX4 724 aa12.99□□□□□ -0.33
NFKB1-205ENST00000505458 PODNQ7Z5L7 613 aa12.99□□□□□ -0.33
NFKB1-205ENST00000505458 V9GY48 417 aaPredicted RBP12.99□□□□□ -0.33
NFKB1-205ENST00000505458 FLT1P17948 1338 aa12.99□□□□□ -0.33
NFKB1-205ENST00000505458 HDLBPQ00341 1268 aaKnown RBP12.99□□□□□ -0.33
NFKB1-205ENST00000505458 STK11IPQ8N1F8 1099 aa12.99□□□□□ -0.33
NFKB1-205ENST00000505458 TRIML1Q8N9V2 468 aa12.99□□□□□ -0.33
NFKB1-205ENST00000505458 GJB4Q9NTQ9 266 aa12.99□□□□□ -0.33
NFKB1-205ENST00000505458 TUBE1Q9UJT0 475 aa12.99□□□□□ -0.33
NFKB1-205ENST00000505458 KCNH3Q9ULD8 1083 aa12.99□□□□□ -0.33
NFKB1-205ENST00000505458 G3V3G9 751 aa12.99□□□□□ -0.33
NFKB1-205ENST00000505458 GUCY1A2P33402 732 aa12.99□□□□□ -0.33
NFKB1-205ENST00000505458 IQCB1Q15051 598 aa12.99□□□□□ -0.33
NFKB1-205ENST00000505458 DIXDC1Q155Q3 683 aa12.99□□□□□ -0.33
NFKB1-205ENST00000505458 ZNF827Q17R98 1081 aa12.99□□□□□ -0.33
NFKB1-205ENST00000505458 DCAF8Q5TAQ9 597 aa12.99□□□□□ -0.33
NFKB1-205ENST00000505458 RCSD1Q6JBY9 416 aa12.99□□□□□ -0.33
NFKB1-205ENST00000505458 DAGLBQ8NCG7 672 aa12.99□□□□□ -0.33
NFKB1-205ENST00000505458 IKBKBO14920 756 aa12.98□□□□□ -0.33
NFKB1-205ENST00000505458 CYP2D6P10635 497 aa12.98□□□□□ -0.33
NFKB1-205ENST00000505458 LUZP1Q86V48 1076 aa12.98□□□□□ -0.33
NFKB1-205ENST00000505458 PLA2G4DQ86XP0 818 aa12.98□□□□□ -0.33
NFKB1-205ENST00000505458 SUPT20HQ8NEM7 779 aa12.98□□□□□ -0.33
NFKB1-205ENST00000505458 SPZ1Q9BXG8 430 aa12.98□□□□□ -0.33
NFKB1-205ENST00000505458 TRIM5Q9C035 493 aa12.98□□□□□ -0.33
NFKB1-205ENST00000505458 KCNJ14Q9UNX9 436 aa12.98□□□□□ -0.33
NFKB1-205ENST00000505458 TOP1P11387 765 aaKnown RBP12.98□□□□□ -0.33
NFKB1-205ENST00000505458 ZNF75DP51815 510 aa12.98□□□□□ -0.33
NFKB1-205ENST00000505458 ORC2Q13416 577 aaPredicted RBP12.98□□□□□ -0.33
NFKB1-205ENST00000505458 CNKSR1Q969H4 720 aa12.98□□□□□ -0.33
NFKB1-205ENST00000505458 MYH8P13535 1937 aa12.98□□□□□ -0.33
NFKB1-205ENST00000505458 WDHD1O75717 1129 aaPredicted RBP12.98□□□□□ -0.33
NFKB1-205ENST00000505458 PLEKHA8P1O95397 391 aa12.98□□□□□ -0.33
NFKB1-205ENST00000505458 RASA1P20936 1047 aa12.98□□□□□ -0.33
NFKB1-205ENST00000505458 MARCKSP29966 332 aaPredicted RBP12.98□□□□□ -0.33
NFKB1-205ENST00000505458 RHBDL3P58872 404 aa12.98□□□□□ -0.33
NFKB1-205ENST00000505458 PLCB2Q00722 1185 aa12.98□□□□□ -0.33
NFKB1-205ENST00000505458 FAM47AQ5JRC9 791 aa12.98□□□□□ -0.33
NFKB1-205ENST00000505458 FBXO2Q9UK22 296 aaPredicted RBP12.98□□□□□ -0.33
NFKB1-205ENST00000505458 MMP10P09238 476 aa12.97□□□□□ -0.33
NFKB1-205ENST00000505458 NLRP5P59047 1200 aa12.97□□□□□ -0.33
NFKB1-205ENST00000505458 SHC4Q6S5L8 630 aa12.97□□□□□ -0.33
NFKB1-205ENST00000505458 OLFM4Q6UX06 510 aa12.97□□□□□ -0.33
NFKB1-205ENST00000505458 KRBA2Q6ZNG9 492 aa12.97□□□□□ -0.33
NFKB1-205ENST00000505458 NPM3O75607 178 aaKnown RBP12.97□□□□□ -0.33
NFKB1-205ENST00000505458 NOVP48745 357 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms