RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 CHMP4BP1P59074 171 aa7.44□□□□□ -1.22
TRAPPC13-205ENST00000504243 LRP8Q14114 963 aa7.44□□□□□ -1.22
TRAPPC13-205ENST00000504243 BMS1Q14692 1282 aaKnown RBP7.44□□□□□ -1.22
TRAPPC13-205ENST00000504243 ARSHQ5FYA8 562 aa7.44□□□□□ -1.22
TRAPPC13-205ENST00000504243 OVOS1Q6IE37 1185 aa7.44□□□□□ -1.22
TRAPPC13-205ENST00000504243 ZNF765Q7L2R6 523 aa7.44□□□□□ -1.22
TRAPPC13-205ENST00000504243 PHACTR4Q8IZ21 702 aa7.44□□□□□ -1.22
TRAPPC13-205ENST00000504243 SHISA5Q8N114 240 aa7.44□□□□□ -1.22
TRAPPC13-205ENST00000504243 TMEM40Q8WWA1 233 aa7.44□□□□□ -1.22
TRAPPC13-205ENST00000504243 DUSP23Q9BVJ7 150 aa7.44□□□□□ -1.22
TRAPPC13-205ENST00000504243 ST7Q9NRC1 585 aa7.44□□□□□ -1.22
TRAPPC13-205ENST00000504243 ADAM30Q9UKF2 790 aa7.44□□□□□ -1.22
TRAPPC13-205ENST00000504243 PRR36Q9H6K5 1346 aa7.44□□□□□ -1.22
TRAPPC13-205ENST00000504243 SLC22A31A6NKX4 558 aa7.43□□□□□ -1.22
TRAPPC13-205ENST00000504243 UPK3BL1B0FP48 263 aa7.43□□□□□ -1.22
TRAPPC13-205ENST00000504243 CHURC1-FNTBB4DL54 471 aa7.43□□□□□ -1.22
TRAPPC13-205ENST00000504243 UPK3BL2E5RIL1 263 aa7.43□□□□□ -1.22
TRAPPC13-205ENST00000504243 FOSL1P15407 271 aa7.43□□□□□ -1.22
TRAPPC13-205ENST00000504243 RAG1P15918 1043 aa7.43□□□□□ -1.22
TRAPPC13-205ENST00000504243 MFSD2AQ8NA29 543 aa7.43□□□□□ -1.22
TRAPPC13-205ENST00000504243 ACSF2Q96CM8 615 aaPredicted RBP7.43□□□□□ -1.22
TRAPPC13-205ENST00000504243 FOXQ1Q9C009 403 aa7.43□□□□□ -1.22
TRAPPC13-205ENST00000504243 PRDM10Q9NQV6 1147 aa7.43□□□□□ -1.22
TRAPPC13-205ENST00000504243 CD97P48960 835 aa7.42□□□□□ -1.22
TRAPPC13-205ENST00000504243 RAB33AQ14088 237 aa7.42□□□□□ -1.22
TRAPPC13-205ENST00000504243 SLBPQ14493 270 aaKnown RBP eCLIP7.42□□□□□ -1.22
TRAPPC13-205ENST00000504243 ARTNQ5T4W7 220 aa7.42□□□□□ -1.22
TRAPPC13-205ENST00000504243 NBPF6Q5VWK0 638 aa7.42□□□□□ -1.22
TRAPPC13-205ENST00000504243 SLC6A19Q695T7 634 aa7.42□□□□□ -1.22
TRAPPC13-205ENST00000504243 ARMCX6Q7L4S7 300 aa7.42□□□□□ -1.22
TRAPPC13-205ENST00000504243 NLRC3Q7RTR2 1065 aa7.42□□□□□ -1.22
TRAPPC13-205ENST00000504243 UBE3DQ7Z6J8 389 aa7.42□□□□□ -1.22
TRAPPC13-205ENST00000504243 TOP6BLQ8N6T0 577 aa7.42□□□□□ -1.22
TRAPPC13-205ENST00000504243 RBBP8NLQ8NC74 664 aaPredicted RBP7.42□□□□□ -1.22
TRAPPC13-205ENST00000504243 XAGE3Q8WTP9 111 aa7.42□□□□□ -1.22
TRAPPC13-205ENST00000504243 ATG4CQ96DT6 458 aa7.42□□□□□ -1.22
TRAPPC13-205ENST00000504243 MRFAP1L1Q96HT8 127 aa7.42□□□□□ -1.22
TRAPPC13-205ENST00000504243 TMEM87BQ96K49 555 aa7.42□□□□□ -1.22
TRAPPC13-205ENST00000504243 NBPF4Q96M43 638 aa7.42□□□□□ -1.22
TRAPPC13-205ENST00000504243 TM9SF2Q99805 663 aa7.42□□□□□ -1.22
TRAPPC13-205ENST00000504243 DPH2Q9BQC3 489 aaPredicted RBP7.42□□□□□ -1.22
TRAPPC13-205ENST00000504243 FBRSQ9HAH7 460 aa7.42□□□□□ -1.22
TRAPPC13-205ENST00000504243 TJP2Q9UDY2 1190 aa7.42□□□□□ -1.22
TRAPPC13-205ENST00000504243 GUCY2CP25092 1073 aa7.41□□□□□ -1.22
TRAPPC13-205ENST00000504243 SSTR4P31391 388 aa7.41□□□□□ -1.22
TRAPPC13-205ENST00000504243 NFE2L2Q16236 605 aa7.41□□□□□ -1.22
TRAPPC13-205ENST00000504243 FXNQ16595 210 aa7.41□□□□□ -1.22
TRAPPC13-205ENST00000504243 TMEM201Q5SNT2 666 aa7.41□□□□□ -1.22
TRAPPC13-205ENST00000504243 TTC6Q86TZ1 520 aa7.41□□□□□ -1.22
TRAPPC13-205ENST00000504243 MCATQ8IVS2 390 aaKnown RBP7.41□□□□□ -1.22
TRAPPC13-205ENST00000504243 MRPL41Q8IXM3 137 aaKnown RBP7.41□□□□□ -1.22
TRAPPC13-205ENST00000504243 SRPK1Q96SB4 655 aaKnown RBP7.41□□□□□ -1.22
TRAPPC13-205ENST00000504243 TNKS2Q9H2K2 1166 aa7.41□□□□□ -1.22
TRAPPC13-205ENST00000504243 PCMTD2Q9NV79 361 aa7.41□□□□□ -1.22
TRAPPC13-205ENST00000504243 SIRPGQ9P1W8 387 aa7.41□□□□□ -1.22
TRAPPC13-205ENST00000504243 MEIS3P2A8K0S8 358 aa7.4□□□□□ -1.22
TRAPPC13-205ENST00000504243 KIAA1324LA8MWY0 1029 aaPredicted RBP7.4□□□□□ -1.22
TRAPPC13-205ENST00000504243 KLF4O43474 513 aa7.4□□□□□ -1.22
TRAPPC13-205ENST00000504243 HYAL3O43820 417 aaPredicted RBP7.4□□□□□ -1.22
TRAPPC13-205ENST00000504243 DNAJA2O60884 412 aa7.4□□□□□ -1.22
TRAPPC13-205ENST00000504243 LEFTY1O75610 366 aa7.4□□□□□ -1.22
TRAPPC13-205ENST00000504243 DDAH1O94760 285 aa7.4□□□□□ -1.22
TRAPPC13-205ENST00000504243 CST3P01034 146 aaPredicted RBP7.4□□□□□ -1.22
TRAPPC13-205ENST00000504243 NME1P15531 152 aaKnown RBP7.4□□□□□ -1.22
TRAPPC13-205ENST00000504243 GBP1P32455 592 aa7.4□□□□□ -1.22
TRAPPC13-205ENST00000504243 NKG7Q16617 165 aa7.4□□□□□ -1.22
TRAPPC13-205ENST00000504243 LRRC4CQ9HCJ2 640 aa7.4□□□□□ -1.22
TRAPPC13-205ENST00000504243 ZFP64Q9NPA5 681 aa7.4□□□□□ -1.22
TRAPPC13-205ENST00000504243 GTF2IRD1Q9UHL9 959 aa7.4□□□□□ -1.22
TRAPPC13-205ENST00000504243 A0A1W2PQH9 124 aa7.39□□□□□ -1.23
TRAPPC13-205ENST00000504243 SMARCA5O60264 1052 aaPredicted RBP7.39□□□□□ -1.23
TRAPPC13-205ENST00000504243 ARHGAP27Q6ZUM4 889 aa7.39□□□□□ -1.23
TRAPPC13-205ENST00000504243 KIF2CQ99661 725 aa7.39□□□□□ -1.23
TRAPPC13-205ENST00000504243 MKNK2Q9HBH9 465 aa7.39□□□□□ -1.23
TRAPPC13-205ENST00000504243 SLC12A7Q9Y666 1083 aa7.39□□□□□ -1.23
TRAPPC13-205ENST00000504243 IGF2BP3O00425 579 aaKnown RBP eCLIP7.38□□□□□ -1.23
TRAPPC13-205ENST00000504243 POLR2BP30876 1174 aaKnown RBP7.38□□□□□ -1.23
TRAPPC13-205ENST00000504243 HOXA10P31260 410 aaPredicted RBP7.38□□□□□ -1.23
TRAPPC13-205ENST00000504243 CASP7P55210 303 aa7.38□□□□□ -1.23
TRAPPC13-205ENST00000504243 PRAMEF13Q5VWM6 474 aa7.38□□□□□ -1.23
TRAPPC13-205ENST00000504243 ZNF746Q6NUN9 644 aaPredicted RBP7.38□□□□□ -1.23
TRAPPC13-205ENST00000504243 UNC5AQ6ZN44 842 aa7.38□□□□□ -1.23
TRAPPC13-205ENST00000504243 NOP9Q86U38 636 aaKnown RBP7.38□□□□□ -1.23
TRAPPC13-205ENST00000504243 DTX1Q86Y01 620 aa7.38□□□□□ -1.23
TRAPPC13-205ENST00000504243 Q8N3U1 123 aa7.38□□□□□ -1.23
TRAPPC13-205ENST00000504243 CELF2-AS1Q8N7Q2 184 aa7.38□□□□□ -1.23
TRAPPC13-205ENST00000504243 SLC9A7Q96T83 725 aa7.38□□□□□ -1.23
TRAPPC13-205ENST00000504243 PIF1Q9H611 641 aa7.38□□□□□ -1.23
TRAPPC13-205ENST00000504243 CNNM2Q9H8M5 875 aa7.38□□□□□ -1.23
TRAPPC13-205ENST00000504243 CDK11AQ9UQ88 783 aaPredicted RBP7.38□□□□□ -1.23
TRAPPC13-205ENST00000504243 MED26O95402 600 aa7.37□□□□□ -1.23
TRAPPC13-205ENST00000504243 DDR2Q16832 855 aa7.37□□□□□ -1.23
TRAPPC13-205ENST00000504243 MSMPQ1L6U9 139 aa7.37□□□□□ -1.23
TRAPPC13-205ENST00000504243 CDCP2Q5VXM1 449 aa7.37□□□□□ -1.23
TRAPPC13-205ENST00000504243 C19orf47Q8N9M1 422 aaKnown RBP7.37□□□□□ -1.23
TRAPPC13-205ENST00000504243 CCDC74BQ96LY2 380 aa7.37□□□□□ -1.23
TRAPPC13-205ENST00000504243 MIPEPQ99797 713 aa7.37□□□□□ -1.23
TRAPPC13-205ENST00000504243 MAPK8IP1Q9UQF2 711 aa7.37□□□□□ -1.23
TRAPPC13-205ENST00000504243 SLITRK5O94991 958 aa7.36□□□□□ -1.23
TRAPPC13-205ENST00000504243 EOMESO95936 686 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms