RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 ERBB4Q15303 1308 aa18.38■□□□□ 0.53
PCDHA1-203ENST00000504120 CDC42BPAQ5VT25 1732 aa18.38■□□□□ 0.53
PCDHA1-203ENST00000504120 PFKFB2O60825 505 aa18.38■□□□□ 0.53
PCDHA1-203ENST00000504120 MYRIPQ8NFW9 859 aa18.38■□□□□ 0.53
PCDHA1-203ENST00000504120 TMEM63CQ9P1W3 806 aa18.38■□□□□ 0.53
PCDHA1-203ENST00000504120 MTX1Q13505 466 aa18.38■□□□□ 0.53
PCDHA1-203ENST00000504120 SYCE1Q8N0S2 351 aa18.38■□□□□ 0.53
PCDHA1-203ENST00000504120 SEC62Q99442 399 aaKnown RBP18.38■□□□□ 0.53
PCDHA1-203ENST00000504120 SNX16P57768 344 aa18.37■□□□□ 0.53
PCDHA1-203ENST00000504120 MAP7D1Q3KQU3 841 aa18.37■□□□□ 0.53
PCDHA1-203ENST00000504120 EAF2Q96CJ1 260 aaPredicted RBP18.37■□□□□ 0.53
PCDHA1-203ENST00000504120 HAUS7Q99871 368 aa18.37■□□□□ 0.53
PCDHA1-203ENST00000504120 RPS8P62241 208 aaKnown RBP18.37■□□□□ 0.53
PCDHA1-203ENST00000504120 BEND3Q5T5X7 828 aa18.37■□□□□ 0.53
PCDHA1-203ENST00000504120 MYCT1Q8N699 235 aa18.37■□□□□ 0.53
PCDHA1-203ENST00000504120 FAM204AQ9H8W3 233 aa18.37■□□□□ 0.53
PCDHA1-203ENST00000504120 SERTAD1Q9UHV2 236 aa18.37■□□□□ 0.53
PCDHA1-203ENST00000504120 A0A0D9SFI3 127 aa18.37■□□□□ 0.53
PCDHA1-203ENST00000504120 ZBED4O75132 1171 aa18.37■□□□□ 0.53
PCDHA1-203ENST00000504120 PHKG2P15735 406 aa18.37■□□□□ 0.53
PCDHA1-203ENST00000504120 KLHL30Q0D2K2 578 aa18.37■□□□□ 0.53
PCDHA1-203ENST00000504120 B4GALNT4Q76KP1 1039 aa18.37■□□□□ 0.53
PCDHA1-203ENST00000504120 PRDM15P57071 1507 aaPredicted RBP18.37■□□□□ 0.53
PCDHA1-203ENST00000504120 IQGAP3Q86VI3 1631 aa18.37■□□□□ 0.53
PCDHA1-203ENST00000504120 H0YIN7 160 aa18.37■□□□□ 0.53
PCDHA1-203ENST00000504120 GNA14O95837 355 aa18.37■□□□□ 0.53
PCDHA1-203ENST00000504120 GAS8O95995 478 aa18.37■□□□□ 0.53
PCDHA1-203ENST00000504120 BCRP11274 1271 aa18.37■□□□□ 0.53
PCDHA1-203ENST00000504120 NOSTRINQ8IVI9 506 aa18.37■□□□□ 0.53
PCDHA1-203ENST00000504120 CDAN1Q8IWY9 1227 aa18.37■□□□□ 0.53
PCDHA1-203ENST00000504120 KIAA1468Q9P260 1216 aa18.37■□□□□ 0.53
PCDHA1-203ENST00000504120 SWAP70Q9UH65 585 aa18.37■□□□□ 0.53
PCDHA1-203ENST00000504120 WWC3Q9ULE0 1092 aa18.37■□□□□ 0.53
PCDHA1-203ENST00000504120 EXOC3O60645 756 aa18.36■□□□□ 0.53
PCDHA1-203ENST00000504120 CFAP157Q5JU67 520 aa18.36■□□□□ 0.53
PCDHA1-203ENST00000504120 EDC3Q96F86 508 aaKnown RBP18.36■□□□□ 0.53
PCDHA1-203ENST00000504120 CTTNBP2NLQ9P2B4 639 aa18.36■□□□□ 0.53
PCDHA1-203ENST00000504120 MYCLP12524 364 aaPredicted RBP18.36■□□□□ 0.53
PCDHA1-203ENST00000504120 PTH1RQ03431 593 aa18.36■□□□□ 0.53
PCDHA1-203ENST00000504120 SFMBT2Q5VUG0 894 aa18.36■□□□□ 0.53
PCDHA1-203ENST00000504120 ZMYND15Q9H091 742 aa18.36■□□□□ 0.53
PCDHA1-203ENST00000504120 STIM2Q9P246 746 aa18.36■□□□□ 0.53
PCDHA1-203ENST00000504120 CLASP1Q7Z460 1538 aa18.36■□□□□ 0.53
PCDHA1-203ENST00000504120 GJA3Q9Y6H8 435 aa18.36■□□□□ 0.53
PCDHA1-203ENST00000504120 PFKFB1P16118 471 aa18.36■□□□□ 0.53
PCDHA1-203ENST00000504120 PNOCQ13519 176 aa18.36■□□□□ 0.53
PCDHA1-203ENST00000504120 ZSCAN10Q96SZ4 725 aaPredicted RBP18.36■□□□□ 0.53
PCDHA1-203ENST00000504120 UGGT1Q9NYU2 1555 aa18.36■□□□□ 0.53
PCDHA1-203ENST00000504120 KDM3AQ9Y4C1 1321 aa18.36■□□□□ 0.53
PCDHA1-203ENST00000504120 FAM47AQ5JRC9 791 aa18.36■□□□□ 0.53
PCDHA1-203ENST00000504120 IFNL3Q8IZI9 196 aa18.36■□□□□ 0.53
PCDHA1-203ENST00000504120 ATP8A2Q9NTI2 1148 aa18.36■□□□□ 0.53
PCDHA1-203ENST00000504120 INTS8Q75QN2 995 aaKnown RBP18.35■□□□□ 0.53
PCDHA1-203ENST00000504120 KIFC2Q96AC6 838 aa18.35■□□□□ 0.53
PCDHA1-203ENST00000504120 MRPL44Q9H9J2 332 aaKnown RBP18.35■□□□□ 0.53
PCDHA1-203ENST00000504120 ANAPC4Q9UJX5 808 aa18.35■□□□□ 0.53
PCDHA1-203ENST00000504120 SMCO2A6NFE2 343 aa18.35■□□□□ 0.53
PCDHA1-203ENST00000504120 GCNT3O95395 438 aa18.35■□□□□ 0.53
PCDHA1-203ENST00000504120 PDE6BP35913 854 aa18.35■□□□□ 0.53
PCDHA1-203ENST00000504120 GTF2A1P52655 376 aaPredicted RBP18.35■□□□□ 0.53
PCDHA1-203ENST00000504120 MCTP2Q6DN12 878 aa18.35■□□□□ 0.53
PCDHA1-203ENST00000504120 RUFY4Q6ZNE9 571 aa18.35■□□□□ 0.53
PCDHA1-203ENST00000504120 TTC16Q8NEE8 873 aa18.35■□□□□ 0.53
PCDHA1-203ENST00000504120 XPO4Q9C0E2 1151 aaKnown RBP18.35■□□□□ 0.53
PCDHA1-203ENST00000504120 BLZF1Q9H2G9 400 aa18.35■□□□□ 0.53
PCDHA1-203ENST00000504120 KCNG1Q9UIX4 513 aa18.35■□□□□ 0.53
PCDHA1-203ENST00000504120 ZMYM6O95789 1325 aa18.35■□□□□ 0.53
PCDHA1-203ENST00000504120 VIMP08670 466 aaKnown RBP18.35■□□□□ 0.53
PCDHA1-203ENST00000504120 ELF2Q15723 593 aa18.35■□□□□ 0.53
PCDHA1-203ENST00000504120 ZYXQ15942 572 aaKnown RBP18.35■□□□□ 0.53
PCDHA1-203ENST00000504120 TTC31Q49AM3 519 aaPredicted RBP18.35■□□□□ 0.53
PCDHA1-203ENST00000504120 CFAP221Q4G0U5 840 aa18.35■□□□□ 0.53
PCDHA1-203ENST00000504120 CEP57Q86XR8 500 aa18.35■□□□□ 0.53
PCDHA1-203ENST00000504120 ZBTB38Q8NAP3 1195 aaPredicted RBP18.35■□□□□ 0.53
PCDHA1-203ENST00000504120 E7EVH7 732 aa18.35■□□□□ 0.53
PCDHA1-203ENST00000504120 HSPD1P10809 573 aaKnown RBP18.35■□□□□ 0.53
PCDHA1-203ENST00000504120 HPDP32754 393 aaPredicted RBP18.35■□□□□ 0.53
PCDHA1-203ENST00000504120 RNASE9P60153 205 aaKnown RBP18.35■□□□□ 0.53
PCDHA1-203ENST00000504120 TRMT44Q8IYL2 757 aaKnown RBP18.35■□□□□ 0.53
PCDHA1-203ENST00000504120 SLF1Q9BQI6 1058 aa18.35■□□□□ 0.53
PCDHA1-203ENST00000504120 CEP104O60308 925 aa18.34■□□□□ 0.53
PCDHA1-203ENST00000504120 RRAGDQ9NQL2 400 aaPredicted RBP18.34■□□□□ 0.53
PCDHA1-203ENST00000504120 METP08581 1390 aa18.34■□□□□ 0.53
PCDHA1-203ENST00000504120 NLRP1Q9C000 1473 aa18.34■□□□□ 0.53
PCDHA1-203ENST00000504120 hCG_1642624A0A1W2PR95 340 aa18.34■□□□□ 0.53
PCDHA1-203ENST00000504120 GOLGA6CA6NDK9 693 aa18.34■□□□□ 0.53
PCDHA1-203ENST00000504120 USP17L12C9JPN9 530 aa18.34■□□□□ 0.53
PCDHA1-203ENST00000504120 USP17L21D6R901 530 aa18.34■□□□□ 0.53
PCDHA1-203ENST00000504120 NOP56O00567 594 aaKnown RBP18.34■□□□□ 0.53
PCDHA1-203ENST00000504120 GOLGA6DP0CG33 693 aa18.34■□□□□ 0.53
PCDHA1-203ENST00000504120 PAK2Q13177 524 aa18.34■□□□□ 0.53
PCDHA1-203ENST00000504120 USH1GQ495M9 461 aa18.34■□□□□ 0.53
PCDHA1-203ENST00000504120 BRDTQ58F21 947 aaPredicted RBP18.34■□□□□ 0.53
PCDHA1-203ENST00000504120 NELFCDQ8IXH7 590 aa18.34■□□□□ 0.53
PCDHA1-203ENST00000504120 LARGE2Q8N3Y3 721 aa18.34■□□□□ 0.53
PCDHA1-203ENST00000504120 GOLGA6AQ9NYA3 693 aa18.34■□□□□ 0.53
PCDHA1-203ENST00000504120 PCCAP05165 728 aaPredicted RBP18.34■□□□□ 0.53
PCDHA1-203ENST00000504120 ALDH1B1P30837 517 aa18.34■□□□□ 0.53
PCDHA1-203ENST00000504120 TBC1D7Q9P0N9 293 aa18.34■□□□□ 0.53
PCDHA1-203ENST00000504120 PLA2R1Q13018 1463 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms