RNA–Protein interactions for RNA: ENST00000502818.5

CPNE4-202, Transcript of copine 4, humanhuman

TSL 5 BASIC

Gene CPNE4, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-202ENST00000502818 TCHHQ07283 1943 aa8.52□□□□□ -1.04
CPNE4-202ENST00000502818 ERICH2A1L162 156 aa8.52□□□□□ -1.05
CPNE4-202ENST00000502818 ADAMTS3O15072 1205 aa8.52□□□□□ -1.05
CPNE4-202ENST00000502818 IGSF3O75054 1194 aa8.52□□□□□ -1.05
CPNE4-202ENST00000502818 NCLP19338 710 aaKnown RBP8.52□□□□□ -1.05
CPNE4-202ENST00000502818 EIF6P56537 245 aaKnown RBP8.52□□□□□ -1.05
CPNE4-202ENST00000502818 JAG1P78504 1218 aa8.52□□□□□ -1.05
CPNE4-202ENST00000502818 RRP1BQ14684 758 aaKnown RBP8.52□□□□□ -1.05
CPNE4-202ENST00000502818 RTN1Q16799 776 aa8.52□□□□□ -1.05
CPNE4-202ENST00000502818 NIM1KQ8IY84 436 aa8.52□□□□□ -1.05
CPNE4-202ENST00000502818 STAG2Q8N3U4 1231 aa8.52□□□□□ -1.05
CPNE4-202ENST00000502818 PIBF1Q8WXW3 757 aa8.52□□□□□ -1.05
CPNE4-202ENST00000502818 CPVLQ9H3G5 476 aa8.52□□□□□ -1.05
CPNE4-202ENST00000502818 SERPINA10Q9UK55 444 aa8.52□□□□□ -1.05
CPNE4-202ENST00000502818 ASTN2O75129 1339 aaPredicted RBP8.52□□□□□ -1.05
CPNE4-202ENST00000502818 TCP10L2B9ZVM9 353 aa8.51□□□□□ -1.05
CPNE4-202ENST00000502818 H3BQV1 296 aa8.51□□□□□ -1.05
CPNE4-202ENST00000502818 SLC3A2P08195 630 aaKnown RBP8.51□□□□□ -1.05
CPNE4-202ENST00000502818 SHMT1P34896 483 aa8.51□□□□□ -1.05
CPNE4-202ENST00000502818 HMGN5P82970 282 aaKnown RBP8.51□□□□□ -1.05
CPNE4-202ENST00000502818 SART3Q15020 963 aaKnown RBP8.51□□□□□ -1.05
CPNE4-202ENST00000502818 IQCA1Q86XH1 822 aa8.51□□□□□ -1.05
CPNE4-202ENST00000502818 ZNF444Q8N0Y2 327 aaPredicted RBP8.51□□□□□ -1.05
CPNE4-202ENST00000502818 SRBD1Q8N5C6 995 aaKnown RBP8.51□□□□□ -1.05
CPNE4-202ENST00000502818 FHDC1Q9C0D6 1143 aaPredicted RBP8.51□□□□□ -1.05
CPNE4-202ENST00000502818 MYH1P12882 1939 aa8.51□□□□□ -1.05
CPNE4-202ENST00000502818 BAZ2BQ9UIF8 2168 aaKnown RBP8.51□□□□□ -1.05
CPNE4-202ENST00000502818 GOLGA8HP0CJ92 632 aa8.51□□□□□ -1.05
CPNE4-202ENST00000502818 TSPY3P0CV98 308 aa8.51□□□□□ -1.05
CPNE4-202ENST00000502818 TSPY8P0CW00 308 aa8.51□□□□□ -1.05
CPNE4-202ENST00000502818 CEBPZQ03701 1054 aaKnown RBP8.51□□□□□ -1.05
CPNE4-202ENST00000502818 PKN1Q16512 942 aa8.51□□□□□ -1.05
CPNE4-202ENST00000502818 NBPF9Q3BBW0 867 aa8.51□□□□□ -1.05
CPNE4-202ENST00000502818 TTC6Q86TZ1 520 aa8.51□□□□□ -1.05
CPNE4-202ENST00000502818 CRACR2BQ8N4Y2 399 aaPredicted RBP8.51□□□□□ -1.05
CPNE4-202ENST00000502818 CEP95Q96GE4 821 aa8.51□□□□□ -1.05
CPNE4-202ENST00000502818 TMEM47Q9BQJ4 181 aa8.51□□□□□ -1.05
CPNE4-202ENST00000502818 ALG1Q9BT22 464 aa8.51□□□□□ -1.05
CPNE4-202ENST00000502818 MRIQ9BWK5 157 aa8.51□□□□□ -1.05
CPNE4-202ENST00000502818 KCNJ14Q9UNX9 436 aa8.51□□□□□ -1.05
CPNE4-202ENST00000502818 NID2Q14112 1375 aa8.51□□□□□ -1.05
CPNE4-202ENST00000502818 FOCADQ5VW36 1801 aa8.51□□□□□ -1.05
CPNE4-202ENST00000502818 FER1L6Q2WGJ9 1857 aa8.5□□□□□ -1.05
CPNE4-202ENST00000502818 SPDYE2BA6NHP3 402 aa8.5□□□□□ -1.05
CPNE4-202ENST00000502818 FMNL1O95466 1100 aaPredicted RBP8.5□□□□□ -1.05
CPNE4-202ENST00000502818 SPDYE6P0CI01 402 aa8.5□□□□□ -1.05
CPNE4-202ENST00000502818 PCP11498 1178 aaKnown RBP8.5□□□□□ -1.05
CPNE4-202ENST00000502818 IFNAR1P17181 557 aa8.5□□□□□ -1.05
CPNE4-202ENST00000502818 PDCP20941 246 aa8.5□□□□□ -1.05
CPNE4-202ENST00000502818 HDLBPQ00341 1268 aaKnown RBP8.5□□□□□ -1.05
CPNE4-202ENST00000502818 FBXO18Q8NFZ0 1043 aa8.5□□□□□ -1.05
CPNE4-202ENST00000502818 C8orf76Q96K31 380 aa8.5□□□□□ -1.05
CPNE4-202ENST00000502818 MTA3Q9BTC8 594 aa8.5□□□□□ -1.05
CPNE4-202ENST00000502818 IDI2Q9BXS1 227 aa8.5□□□□□ -1.05
CPNE4-202ENST00000502818 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.5□□□□□ -1.05
CPNE4-202ENST00000502818 STX8Q9UNK0 236 aa8.5□□□□□ -1.05
CPNE4-202ENST00000502818 DDX49Q9Y6V7 483 aaKnown RBP8.5□□□□□ -1.05
CPNE4-202ENST00000502818 SIPA1L1O43166 1804 aa8.5□□□□□ -1.05
CPNE4-202ENST00000502818 ZNF541Q9H0D2 1346 aa8.5□□□□□ -1.05
CPNE4-202ENST00000502818 DHX16O60231 1041 aaKnown RBP8.5□□□□□ -1.05
CPNE4-202ENST00000502818 MRE11P49959 708 aa8.5□□□□□ -1.05
CPNE4-202ENST00000502818 SSRP1Q08945 709 aaKnown RBP8.5□□□□□ -1.05
CPNE4-202ENST00000502818 GRIPAP1Q4V328 841 aa8.5□□□□□ -1.05
CPNE4-202ENST00000502818 NOM1Q5C9Z4 860 aaKnown RBP8.5□□□□□ -1.05
CPNE4-202ENST00000502818 RBM26Q5T8P6 1007 aaKnown RBP8.5□□□□□ -1.05
CPNE4-202ENST00000502818 KRT40Q6A162 431 aa8.5□□□□□ -1.05
CPNE4-202ENST00000502818 SYNE3Q6ZMZ3 975 aa8.5□□□□□ -1.05
CPNE4-202ENST00000502818 CATIPQ7Z7H3 387 aa8.5□□□□□ -1.05
CPNE4-202ENST00000502818 AMOTL1Q8IY63 956 aa8.5□□□□□ -1.05
CPNE4-202ENST00000502818 TMTC2Q8N394 836 aa8.5□□□□□ -1.05
CPNE4-202ENST00000502818 PNMA1Q8ND90 353 aa8.5□□□□□ -1.05
CPNE4-202ENST00000502818 NEDD1Q8NHV4 660 aa8.5□□□□□ -1.05
CPNE4-202ENST00000502818 OXER1Q8TDS5 423 aa8.5□□□□□ -1.05
CPNE4-202ENST00000502818 ZNF70Q9UC06 446 aaPredicted RBP8.5□□□□□ -1.05
CPNE4-202ENST00000502818 SERPINB13Q9UIV8 391 aa8.5□□□□□ -1.05
CPNE4-202ENST00000502818 ISY1Q9ULR0 285 aaKnown RBP8.5□□□□□ -1.05
CPNE4-202ENST00000502818 V9GY48 417 aaPredicted RBP8.5□□□□□ -1.05
CPNE4-202ENST00000502818 CNTNAP1P78357 1384 aa8.49□□□□□ -1.05
CPNE4-202ENST00000502818 TPM2P07951 284 aa8.49□□□□□ -1.05
CPNE4-202ENST00000502818 KIF23Q02241 960 aaPredicted RBP8.49□□□□□ -1.05
CPNE4-202ENST00000502818 SOGA3Q5TF21 947 aa8.49□□□□□ -1.05
CPNE4-202ENST00000502818 CIAPIN1Q6FI81 312 aa8.49□□□□□ -1.05
CPNE4-202ENST00000502818 CAVIN1Q6NZI2 390 aaKnown RBP8.49□□□□□ -1.05
CPNE4-202ENST00000502818 TMTC3Q6ZXV5 915 aa8.49□□□□□ -1.05
CPNE4-202ENST00000502818 CERS3Q8IU89 383 aa8.49□□□□□ -1.05
CPNE4-202ENST00000502818 ZSCAN29Q8IWY8 852 aaPredicted RBP8.49□□□□□ -1.05
CPNE4-202ENST00000502818 LRRC47Q8N1G4 583 aaKnown RBP8.49□□□□□ -1.05
CPNE4-202ENST00000502818 ANKS1AQ92625 1134 aa8.49□□□□□ -1.05
CPNE4-202ENST00000502818 USP28Q96RU2 1077 aa8.49□□□□□ -1.05
CPNE4-202ENST00000502818 SPON1Q9HCB6 807 aa8.49□□□□□ -1.05
CPNE4-202ENST00000502818 TCP11L1Q9NUJ3 509 aa8.49□□□□□ -1.05
CPNE4-202ENST00000502818 TMEM63CQ9P1W3 806 aa8.49□□□□□ -1.05
CPNE4-202ENST00000502818 MAD2L2Q9UI95 211 aa8.49□□□□□ -1.05
CPNE4-202ENST00000502818 ECM29Q5VYK3 1845 aa8.49□□□□□ -1.05
CPNE4-202ENST00000502818 CNTNAP5Q8WYK1 1306 aa8.49□□□□□ -1.05
CPNE4-202ENST00000502818 IGKV6D-41A0A0C4DH26 115 aa8.48□□□□□ -1.05
CPNE4-202ENST00000502818 FAM205CA6NFA0 338 aa8.48□□□□□ -1.05
CPNE4-202ENST00000502818 USP17L5A8MUK1 530 aa8.48□□□□□ -1.05
CPNE4-202ENST00000502818 CYTH3O43739 400 aa8.48□□□□□ -1.05
CPNE4-202ENST00000502818 GDF11O95390 407 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms