RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 POMGNT1Q8WZA1 660 aa12.32□□□□□ -0.44
AC055713.1-201ENST00000498967 TRIM45Q9H8W5 580 aaPredicted RBP12.32□□□□□ -0.44
AC055713.1-201ENST00000498967 CHCHD3Q9NX63 227 aaKnown RBP12.32□□□□□ -0.44
AC055713.1-201ENST00000498967 NFKBIL1Q9UBC1 381 aaPredicted RBP12.32□□□□□ -0.44
AC055713.1-201ENST00000498967 SYCE1LA8MT33 242 aa12.31□□□□□ -0.44
AC055713.1-201ENST00000498967 ST13P4Q8IZP2 240 aaPredicted RBP12.31□□□□□ -0.44
AC055713.1-201ENST00000498967 FBXL13Q8NEE6 735 aa12.31□□□□□ -0.44
AC055713.1-201ENST00000498967 BOLA2Q9H3K6 86 aa12.31□□□□□ -0.44
AC055713.1-201ENST00000498967 FGFR1OP2Q9NVK5 253 aa12.31□□□□□ -0.44
AC055713.1-201ENST00000498967 TACO1Q9BSH4 297 aaKnown RBP12.31□□□□□ -0.44
AC055713.1-201ENST00000498967 DCAF17Q5H9S7 520 aaPredicted RBP12.31□□□□□ -0.44
AC055713.1-201ENST00000498967 PHF21AQ96BD5 680 aa12.31□□□□□ -0.44
AC055713.1-201ENST00000498967 PARVBQ9HBI1 364 aa12.31□□□□□ -0.44
AC055713.1-201ENST00000498967 ITM2BQ9Y287 266 aa12.31□□□□□ -0.44
AC055713.1-201ENST00000498967 MRPS15P82914 257 aaKnown RBP12.31□□□□□ -0.44
AC055713.1-201ENST00000498967 RAPGEF1Q13905 1077 aa12.31□□□□□ -0.44
AC055713.1-201ENST00000498967 BRAPQ7Z569 592 aa12.31□□□□□ -0.44
AC055713.1-201ENST00000498967 NOD1Q9Y239 953 aa12.31□□□□□ -0.44
AC055713.1-201ENST00000498967 NAPAP54920 295 aa12.31□□□□□ -0.44
AC055713.1-201ENST00000498967 ATG16L1Q676U5 607 aa12.31□□□□□ -0.44
AC055713.1-201ENST00000498967 HAUS3Q68CZ6 603 aa12.31□□□□□ -0.44
AC055713.1-201ENST00000498967 FCHSD1Q86WN1 690 aa12.31□□□□□ -0.44
AC055713.1-201ENST00000498967 PROCA1Q8NCQ7 364 aaPredicted RBP12.31□□□□□ -0.44
AC055713.1-201ENST00000498967 PSMA4P25789 261 aaKnown RBP12.31□□□□□ -0.44
AC055713.1-201ENST00000498967 ZSCAN23Q3MJ62 389 aa12.31□□□□□ -0.44
AC055713.1-201ENST00000498967 ACBD5Q5T8D3 534 aaPredicted RBP12.31□□□□□ -0.44
AC055713.1-201ENST00000498967 ANGPTL2Q9UKU9 493 aa12.31□□□□□ -0.44
AC055713.1-201ENST00000498967 TRPC6Q9Y210 931 aa12.31□□□□□ -0.44
AC055713.1-201ENST00000498967 STRN3Q13033 797 aa12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 CCDC186Q7Z3E2 898 aa12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 DDX54Q8TDD1 881 aaKnown RBP12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 PYGBP11216 843 aa12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 GTF3C6Q969F1 213 aa12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 DACH2Q96NX9 599 aa12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 SPZ1Q9BXG8 430 aa12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 PANK2Q9BZ23 570 aa12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 ZNF212Q9UDV6 495 aa12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 A0A1B0GVL5 298 aa12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 MCF2P10911 925 aa12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 PLCD1P51178 756 aa12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 MED21Q13503 144 aa12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 NFE2L2Q16236 605 aa12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 TSR2Q969E8 191 aaKnown RBP12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 HOOK2Q96ED9 719 aa12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 OTUB1Q96FW1 271 aaPredicted RBP12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 FBXO2Q9UK22 296 aaPredicted RBP12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 EFCAB8A8MWE9 144 aa12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 THAP12O43422 761 aa12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 ZSCAN22P10073 491 aaPredicted RBP12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 KRT9P35527 623 aa12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 BLVRAP53004 296 aa12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 MRPL40Q9NQ50 206 aaKnown RBP12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 CAPN7Q9Y6W3 813 aa12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 SESN3P58005 492 aa12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 ISM2Q6H9L7 571 aa12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 PAIP2BQ9ULR5 123 aaKnown RBP12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 TOPBP1Q92547 1522 aa12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 FMNL1O95466 1100 aaPredicted RBP12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 CLTAP09496 248 aa12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 KCNH5Q8NCM2 988 aa12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 ATP6V1E2Q96A05 226 aa12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 CLSTN2Q9H4D0 955 aa12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 TTLL3Q9Y4R7 772 aa12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 CCDC61Q9Y6R9 512 aa12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 CCDC169A6NNP5 214 aa12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 SEPT2Q15019 361 aa12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 SKA2Q8WVK7 121 aaPredicted RBP12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 IL1RAPL2Q9NP60 686 aa12.3□□□□□ -0.44
AC055713.1-201ENST00000498967 BACH1O14867 736 aa12.29□□□□□ -0.44
AC055713.1-201ENST00000498967 LMOD1P29536 600 aaPredicted RBP12.29□□□□□ -0.44
AC055713.1-201ENST00000498967 PLEKHM3Q6ZWE6 761 aa12.29□□□□□ -0.44
AC055713.1-201ENST00000498967 MRFAP1L1Q96HT8 127 aa12.29□□□□□ -0.44
AC055713.1-201ENST00000498967 ALG1Q9BT22 464 aa12.29□□□□□ -0.44
AC055713.1-201ENST00000498967 IMPACTQ9P2X3 320 aa12.29□□□□□ -0.44
AC055713.1-201ENST00000498967 ARHGAP26Q9UNA1 814 aa12.29□□□□□ -0.44
AC055713.1-201ENST00000498967 GSTA4O15217 222 aa12.29□□□□□ -0.44
AC055713.1-201ENST00000498967 PRDM1O75626 825 aa12.29□□□□□ -0.44
AC055713.1-201ENST00000498967 SRGAP2BP0DMP2 458 aa12.29□□□□□ -0.44
AC055713.1-201ENST00000498967 GNAT2P19087 354 aa12.29□□□□□ -0.44
AC055713.1-201ENST00000498967 AOPEPQ8N6M6 819 aa12.29□□□□□ -0.44
AC055713.1-201ENST00000498967 SPINK5Q9NQ38 1064 aaPredicted RBP12.29□□□□□ -0.44
AC055713.1-201ENST00000498967 TFIP11Q9UBB9 837 aaKnown RBP12.29□□□□□ -0.44
AC055713.1-201ENST00000498967 CNTRLQ7Z7A1 2325 aa12.29□□□□□ -0.44
AC055713.1-201ENST00000498967 PRR23D1E9PI22 279 aaPredicted RBP12.29□□□□□ -0.44
AC055713.1-201ENST00000498967 UQCRFS1P1P0C7P4 283 aa12.29□□□□□ -0.44
AC055713.1-201ENST00000498967 PRR23D2P0DMB1 279 aaPredicted RBP12.29□□□□□ -0.44
AC055713.1-201ENST00000498967 PYGMP11217 842 aa12.29□□□□□ -0.44
AC055713.1-201ENST00000498967 APBA1Q02410 837 aa12.29□□□□□ -0.44
AC055713.1-201ENST00000498967 GJC2Q5T442 439 aaPredicted RBP12.29□□□□□ -0.44
AC055713.1-201ENST00000498967 GINS4Q9BRT9 223 aa12.29□□□□□ -0.44
AC055713.1-201ENST00000498967 TEX13AQ9BXU3 409 aaPredicted RBP12.29□□□□□ -0.44
AC055713.1-201ENST00000498967 GPHNQ9NQX3 736 aaPredicted RBP12.29□□□□□ -0.44
AC055713.1-201ENST00000498967 ANKLE2Q86XL3 938 aa12.29□□□□□ -0.44
AC055713.1-201ENST00000498967 MTBPQ96DY7 904 aa12.29□□□□□ -0.44
AC055713.1-201ENST00000498967 NR1I2O75469 434 aa12.29□□□□□ -0.44
AC055713.1-201ENST00000498967 EFCAB13Q8IY85 973 aa12.29□□□□□ -0.44
AC055713.1-201ENST00000498967 BBS5Q8N3I7 341 aa12.29□□□□□ -0.44
AC055713.1-201ENST00000498967 GNAT3A8MTJ3 354 aa12.29□□□□□ -0.44
AC055713.1-201ENST00000498967 NVLO15381 856 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms