RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 EXOSC10Q01780 885 aaKnown RBP23.3■■□□□ 1.32
ACTN4-208ENST00000497637 PPATQ06203 517 aa23.3■■□□□ 1.32
ACTN4-208ENST00000497637 COL9A3Q14050 684 aaPredicted RBP23.3■■□□□ 1.32
ACTN4-208ENST00000497637 CDAN1Q8IWY9 1227 aa23.3■■□□□ 1.32
ACTN4-208ENST00000497637 TNPO1Q92973 898 aaKnown RBP23.3■■□□□ 1.32
ACTN4-208ENST00000497637 WRNIP1Q96S55 665 aa23.3■■□□□ 1.32
ACTN4-208ENST00000497637 ZMYM6O95789 1325 aa23.3■■□□□ 1.32
ACTN4-208ENST00000497637 PATL2C9JE40 543 aaKnown RBP23.29■■□□□ 1.32
ACTN4-208ENST00000497637 PDHXO00330 501 aa23.29■■□□□ 1.32
ACTN4-208ENST00000497637 MBD4O95243 580 aa23.29■■□□□ 1.32
ACTN4-208ENST00000497637 CYP7A1P22680 504 aa23.29■■□□□ 1.32
ACTN4-208ENST00000497637 PRKCZQ05513 592 aa23.29■■□□□ 1.32
ACTN4-208ENST00000497637 TOB2Q14106 344 aaPredicted RBP23.29■■□□□ 1.32
ACTN4-208ENST00000497637 CLEC17AQ6ZS10 378 aa23.29■■□□□ 1.32
ACTN4-208ENST00000497637 NECAB2Q7Z6G3 386 aa23.29■■□□□ 1.32
ACTN4-208ENST00000497637 RAI14Q9P0K7 980 aa23.29■■□□□ 1.32
ACTN4-208ENST00000497637 TTF2Q9UNY4 1162 aaKnown RBP23.29■■□□□ 1.32
ACTN4-208ENST00000497637 MCM4P33991 863 aa23.28■■□□□ 1.32
ACTN4-208ENST00000497637 TDRD7Q8NHU6 1098 aaKnown RBP23.28■■□□□ 1.32
ACTN4-208ENST00000497637 LARP6Q9BRS8 491 aaKnown RBP23.28■■□□□ 1.32
ACTN4-208ENST00000497637 ABCF2Q9UG63 623 aa23.28■■□□□ 1.32
ACTN4-208ENST00000497637 TPCN1Q9ULQ1 816 aa23.28■■□□□ 1.32
ACTN4-208ENST00000497637 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.28■■□□□ 1.32
ACTN4-208ENST00000497637 FAM205AQ6ZU69 1335 aa23.28■■□□□ 1.32
ACTN4-208ENST00000497637 ADGRA2Q96PE1 1338 aa23.28■■□□□ 1.32
ACTN4-208ENST00000497637 ZSWIM8A7E2V4 1837 aa23.27■■□□□ 1.32
ACTN4-208ENST00000497637 ZNF213O14771 459 aa23.27■■□□□ 1.32
ACTN4-208ENST00000497637 LARGE1O95461 756 aa23.27■■□□□ 1.32
ACTN4-208ENST00000497637 ME3Q16798 604 aa23.27■■□□□ 1.32
ACTN4-208ENST00000497637 MFSD14BQ5SR56 506 aa23.27■■□□□ 1.32
ACTN4-208ENST00000497637 TDHQ8IZJ6 230 aa23.27■■□□□ 1.32
ACTN4-208ENST00000497637 PXYLP1Q8TE99 480 aa23.27■■□□□ 1.32
ACTN4-208ENST00000497637 ZKSCAN4Q969J2 545 aaPredicted RBP23.27■■□□□ 1.32
ACTN4-208ENST00000497637 ARMT1Q9H993 441 aa23.27■■□□□ 1.32
ACTN4-208ENST00000497637 ADCY3O60266 1144 aa23.26■■□□□ 1.31
ACTN4-208ENST00000497637 SPTY2D1Q68D10 685 aaPredicted RBP23.26■■□□□ 1.31
ACTN4-208ENST00000497637 TCEANC2Q96MN5 208 aa23.26■■□□□ 1.31
ACTN4-208ENST00000497637 DEFB118Q96PH6 123 aa23.26■■□□□ 1.31
ACTN4-208ENST00000497637 PARK7Q99497 189 aaKnown RBP23.26■■□□□ 1.31
ACTN4-208ENST00000497637 JAG2Q9Y219 1238 aa23.26■■□□□ 1.31
ACTN4-208ENST00000497637 SALL1Q9NSC2 1324 aa23.26■■□□□ 1.31
ACTN4-208ENST00000497637 MYO5AQ9Y4I1 1855 aaKnown RBP23.26■■□□□ 1.31
ACTN4-208ENST00000497637 APPP05067 770 aa23.25■■□□□ 1.31
ACTN4-208ENST00000497637 DCAF15Q66K64 600 aa23.25■■□□□ 1.31
ACTN4-208ENST00000497637 Q6ZUG5 572 aa23.25■■□□□ 1.31
ACTN4-208ENST00000497637 IFNL3Q8IZI9 196 aa23.25■■□□□ 1.31
ACTN4-208ENST00000497637 FBXL16Q8N461 479 aa23.25■■□□□ 1.31
ACTN4-208ENST00000497637 WDR66Q8TBY9 1149 aa23.25■■□□□ 1.31
ACTN4-208ENST00000497637 PAWRQ96IZ0 340 aaKnown RBP23.25■■□□□ 1.31
ACTN4-208ENST00000497637 GBP4Q96PP9 640 aa23.25■■□□□ 1.31
ACTN4-208ENST00000497637 AGXT2Q9BYV1 514 aa23.25■■□□□ 1.31
ACTN4-208ENST00000497637 CRISPLD2Q9H0B8 497 aa23.25■■□□□ 1.31
ACTN4-208ENST00000497637 MAGEB6P1A0A0J9YX57 407 aa23.24■■□□□ 1.31
ACTN4-208ENST00000497637 GSG1L2A8MUP6 293 aa23.24■■□□□ 1.31
ACTN4-208ENST00000497637 CHAF1AQ13111 956 aaPredicted RBP23.24■■□□□ 1.31
ACTN4-208ENST00000497637 NAA16Q6N069 864 aaPredicted RBP23.24■■□□□ 1.31
ACTN4-208ENST00000497637 LCORLQ8N3X6 602 aa23.24■■□□□ 1.31
ACTN4-208ENST00000497637 PAK6Q9NQU5 681 aaPredicted RBP23.24■■□□□ 1.31
ACTN4-208ENST00000497637 PRDM6Q9NQX0 595 aa23.24■■□□□ 1.31
ACTN4-208ENST00000497637 INHAP05111 366 aa23.23■■□□□ 1.31
ACTN4-208ENST00000497637 CRKP46108 304 aa23.23■■□□□ 1.31
ACTN4-208ENST00000497637 HAND2P61296 217 aa23.23■■□□□ 1.31
ACTN4-208ENST00000497637 ST3GAL1Q11201 340 aa23.23■■□□□ 1.31
ACTN4-208ENST00000497637 CCDC83Q8IWF9 413 aa23.23■■□□□ 1.31
ACTN4-208ENST00000497637 ANKLE1Q8NAG6 615 aa23.23■■□□□ 1.31
ACTN4-208ENST00000497637 NACAP1Q9BZK3 213 aa23.23■■□□□ 1.31
ACTN4-208ENST00000497637 SMC3Q9UQE7 1217 aa23.23■■□□□ 1.31
ACTN4-208ENST00000497637 ZDHHC9Q9Y397 364 aa23.23■■□□□ 1.31
ACTN4-208ENST00000497637 SLC4A4Q9Y6R1 1079 aa23.23■■□□□ 1.31
ACTN4-208ENST00000497637 VCANP13611 3396 aa23.23■■□□□ 1.31
ACTN4-208ENST00000497637 WDR19Q8NEZ3 1342 aa23.23■■□□□ 1.31
ACTN4-208ENST00000497637 BRD1O95696 1058 aa23.22■■□□□ 1.31
ACTN4-208ENST00000497637 BCRP11274 1271 aa23.22■■□□□ 1.31
ACTN4-208ENST00000497637 HDLBPQ00341 1268 aaKnown RBP23.22■■□□□ 1.31
ACTN4-208ENST00000497637 IRF5Q13568 498 aa23.22■■□□□ 1.31
ACTN4-208ENST00000497637 FKBP1CQ5VVH2 108 aa23.22■■□□□ 1.31
ACTN4-208ENST00000497637 FAM83AQ86UY5 434 aa23.22■■□□□ 1.31
ACTN4-208ENST00000497637 MB21D2Q8IYB1 491 aaPredicted RBP23.22■■□□□ 1.31
ACTN4-208ENST00000497637 C7orf61Q8IZ16 206 aa23.22■■□□□ 1.31
ACTN4-208ENST00000497637 NCOA7Q8NI08 942 aa23.22■■□□□ 1.31
ACTN4-208ENST00000497637 NSUN4Q96CB9 384 aaKnown RBP23.22■■□□□ 1.31
ACTN4-208ENST00000497637 RIOK1Q9BRS2 568 aaKnown RBP23.22■■□□□ 1.31
ACTN4-208ENST00000497637 EPB41L4AQ9HCS5 686 aaPredicted RBP23.22■■□□□ 1.31
ACTN4-208ENST00000497637 TMOD2Q9NZR1 351 aa23.22■■□□□ 1.31
ACTN4-208ENST00000497637 KCNH4Q9UQ05 1017 aa23.22■■□□□ 1.31
ACTN4-208ENST00000497637 FLT3LGP49771 235 aa23.21■■□□□ 1.31
ACTN4-208ENST00000497637 ADGRA1Q86SQ6 560 aa23.21■■□□□ 1.31
ACTN4-208ENST00000497637 MIGA1Q8NAN2 632 aa23.21■■□□□ 1.31
ACTN4-208ENST00000497637 ZNF384Q8TF68 577 aa23.21■■□□□ 1.31
ACTN4-208ENST00000497637 NBPF3Q9H094 633 aa23.21■■□□□ 1.31
ACTN4-208ENST00000497637 NAPBQ9H115 298 aa23.21■■□□□ 1.31
ACTN4-208ENST00000497637 ZMYND8Q9ULU4 1186 aaPredicted RBP23.21■■□□□ 1.31
ACTN4-208ENST00000497637 GABRQQ9UN88 632 aa23.21■■□□□ 1.31
ACTN4-208ENST00000497637 RPTORQ8N122 1335 aa23.21■■□□□ 1.31
ACTN4-208ENST00000497637 DDX11L8A8MPP1 907 aa23.2■■□□□ 1.3
ACTN4-208ENST00000497637 PRKAB2O43741 272 aa23.2■■□□□ 1.3
ACTN4-208ENST00000497637 MECOMQ03112 1051 aa23.2■■□□□ 1.3
ACTN4-208ENST00000497637 PKP1Q13835 747 aa23.2■■□□□ 1.3
ACTN4-208ENST00000497637 FAM109BQ6ICB4 259 aaPredicted RBP23.2■■□□□ 1.3
ACTN4-208ENST00000497637 NECAB1Q8N987 351 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms