RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 ELNP15502 786 aa12.79□□□□□ -0.36
NELFE-213ENST00000494956 HOXD10P28358 340 aa12.79□□□□□ -0.36
NELFE-213ENST00000494956 GRK4P32298 578 aa12.79□□□□□ -0.36
NELFE-213ENST00000494956 FLT3LGP49771 235 aa12.79□□□□□ -0.36
NELFE-213ENST00000494956 Q3C1V9 767 aa12.79□□□□□ -0.36
NELFE-213ENST00000494956 ANKRD45Q5TZF3 282 aa12.79□□□□□ -0.36
NELFE-213ENST00000494956 CTR9Q6PD62 1173 aa12.79□□□□□ -0.36
NELFE-213ENST00000494956 USP17L2Q6R6M4 530 aa12.79□□□□□ -0.36
NELFE-213ENST00000494956 NBPF11Q86T75 865 aa12.79□□□□□ -0.36
NELFE-213ENST00000494956 SEC62Q99442 399 aaKnown RBP12.79□□□□□ -0.36
NELFE-213ENST00000494956 TMEM106CQ9BVX2 250 aa12.79□□□□□ -0.36
NELFE-213ENST00000494956 CABP5Q9NP86 173 aa12.79□□□□□ -0.36
NELFE-213ENST00000494956 TAOK2Q9UL54 1235 aa12.79□□□□□ -0.36
NELFE-213ENST00000494956 HOXA7P31268 230 aaPredicted RBP12.78□□□□□ -0.36
NELFE-213ENST00000494956 PRMT2P55345 433 aa12.78□□□□□ -0.36
NELFE-213ENST00000494956 HERVK_113P62684 666 aa12.78□□□□□ -0.36
NELFE-213ENST00000494956 PABPC4Q13310 644 aaKnown RBP eCLIP12.78□□□□□ -0.36
NELFE-213ENST00000494956 KIAA1755Q5JYT7 1200 aa12.78□□□□□ -0.36
NELFE-213ENST00000494956 C12orf60Q5U649 245 aa12.78□□□□□ -0.36
NELFE-213ENST00000494956 EXOC6Q8TAG9 804 aa12.78□□□□□ -0.36
NELFE-213ENST00000494956 GPATCH3Q96I76 525 aa12.78□□□□□ -0.36
NELFE-213ENST00000494956 STRBPQ96SI9 672 aaKnown RBP12.78□□□□□ -0.36
NELFE-213ENST00000494956 PAGR1Q9BTK6 254 aa12.78□□□□□ -0.36
NELFE-213ENST00000494956 ATP8A2Q9NTI2 1148 aa12.78□□□□□ -0.36
NELFE-213ENST00000494956 GINM1Q9NU53 330 aa12.78□□□□□ -0.36
NELFE-213ENST00000494956 BIN2Q9UBW5 565 aaPredicted RBP12.78□□□□□ -0.36
NELFE-213ENST00000494956 GSG1L2A8MUP6 293 aa12.77□□□□□ -0.37
NELFE-213ENST00000494956 RNF113AO15541 343 aaKnown RBP12.77□□□□□ -0.37
NELFE-213ENST00000494956 ADCY3O60266 1144 aa12.77□□□□□ -0.37
NELFE-213ENST00000494956 VCAM1P19320 739 aa12.77□□□□□ -0.37
NELFE-213ENST00000494956 MX1P20591 662 aa12.77□□□□□ -0.37
NELFE-213ENST00000494956 GCLCP48506 637 aaPredicted RBP12.77□□□□□ -0.37
NELFE-213ENST00000494956 CDK8P49336 464 aa12.77□□□□□ -0.37
NELFE-213ENST00000494956 ZSCAN25Q6NSZ9 544 aa12.77□□□□□ -0.37
NELFE-213ENST00000494956 RBPJLQ9UBG7 517 aa12.77□□□□□ -0.37
NELFE-213ENST00000494956 SALL3Q9BXA9 1300 aa12.77□□□□□ -0.37
NELFE-213ENST00000494956 PDE4DIPQ5VU43 2346 aa12.77□□□□□ -0.37
NELFE-213ENST00000494956 CCL5P13501 91 aa12.76□□□□□ -0.37
NELFE-213ENST00000494956 TRIM32Q13049 653 aa12.76□□□□□ -0.37
NELFE-213ENST00000494956 SIAH1Q8IUQ4 282 aa12.76□□□□□ -0.37
NELFE-213ENST00000494956 APPBP2Q92624 585 aa12.76□□□□□ -0.37
NELFE-213ENST00000494956 COA7Q96BR5 231 aa12.76□□□□□ -0.37
NELFE-213ENST00000494956 SHISA4Q96DD7 197 aa12.76□□□□□ -0.37
NELFE-213ENST00000494956 C12orf42Q96LP6 360 aa12.76□□□□□ -0.37
NELFE-213ENST00000494956 KIAA1683Q9H0B3 1180 aa12.76□□□□□ -0.37
NELFE-213ENST00000494956 UNC93B1Q9H1C4 597 aa12.76□□□□□ -0.37
NELFE-213ENST00000494956 PORCNQ9H237 461 aa12.76□□□□□ -0.37
NELFE-213ENST00000494956 EPB41L4AQ9HCS5 686 aaPredicted RBP12.76□□□□□ -0.37
NELFE-213ENST00000494956 MORF4L1Q9UBU8 362 aa12.76□□□□□ -0.37
NELFE-213ENST00000494956 TTC41PQ6P2S7 1318 aa12.76□□□□□ -0.37
NELFE-213ENST00000494956 RLFQ13129 1914 aa12.76□□□□□ -0.37
NELFE-213ENST00000494956 GPAA1O43292 621 aa12.75□□□□□ -0.37
NELFE-213ENST00000494956 CNMDO75829 334 aa12.75□□□□□ -0.37
NELFE-213ENST00000494956 IGHDP01880 384 aa12.75□□□□□ -0.37
NELFE-213ENST00000494956 B4GALNT3Q6L9W6 998 aa12.75□□□□□ -0.37
NELFE-213ENST00000494956 CATSPERGQ6ZRH7 1159 aa12.75□□□□□ -0.37
NELFE-213ENST00000494956 CCDC129Q6ZRS4 1044 aa12.75□□□□□ -0.37
NELFE-213ENST00000494956 C16orf86Q6ZW13 317 aa12.75□□□□□ -0.37
NELFE-213ENST00000494956 FSD1Q9BTV5 496 aa12.75□□□□□ -0.37
NELFE-213ENST00000494956 RNF208Q9H0X6 261 aa12.75□□□□□ -0.37
NELFE-213ENST00000494956 RPAP3Q9H6T3 665 aaPredicted RBP12.75□□□□□ -0.37
NELFE-213ENST00000494956 GJD2Q9UKL4 321 aa12.75□□□□□ -0.37
NELFE-213ENST00000494956 MINDY4BA8MYZ0 360 aa12.74□□□□□ -0.37
NELFE-213ENST00000494956 USP17L15C9J2P7 530 aa12.74□□□□□ -0.37
NELFE-213ENST00000494956 USP17L13C9JLJ4 530 aa12.74□□□□□ -0.37
NELFE-213ENST00000494956 USP17L11C9JVI0 530 aa12.74□□□□□ -0.37
NELFE-213ENST00000494956 USP17L18D6R9N7 530 aa12.74□□□□□ -0.37
NELFE-213ENST00000494956 USP17L22D6RA61 530 aa12.74□□□□□ -0.37
NELFE-213ENST00000494956 USP17L17D6RBQ6 530 aa12.74□□□□□ -0.37
NELFE-213ENST00000494956 USP17L19D6RCP7 530 aa12.74□□□□□ -0.37
NELFE-213ENST00000494956 USP17L20D6RJB6 530 aa12.74□□□□□ -0.37
NELFE-213ENST00000494956 ERC2O15083 957 aa12.74□□□□□ -0.37
NELFE-213ENST00000494956 GLRX3O76003 335 aaKnown RBP12.74□□□□□ -0.37
NELFE-213ENST00000494956 INHAP05111 366 aa12.74□□□□□ -0.37
NELFE-213ENST00000494956 ERVK-9P63128 1117 aa12.74□□□□□ -0.37
NELFE-213ENST00000494956 ERVK-24P63145 666 aa12.74□□□□□ -0.37
NELFE-213ENST00000494956 IRX6P78412 446 aaPredicted RBP12.74□□□□□ -0.37
NELFE-213ENST00000494956 USP17L24Q0WX57 530 aa12.74□□□□□ -0.37
NELFE-213ENST00000494956 HDAC1Q13547 482 aaPredicted RBP12.74□□□□□ -0.37
NELFE-213ENST00000494956 TMEM179Q6ZVK1 233 aa12.74□□□□□ -0.37
NELFE-213ENST00000494956 SPICE1Q8N0Z3 855 aa12.74□□□□□ -0.37
NELFE-213ENST00000494956 SLAIN1Q8ND83 568 aa12.74□□□□□ -0.37
NELFE-213ENST00000494956 GPRC5AQ8NFJ5 357 aa12.74□□□□□ -0.37
NELFE-213ENST00000494956 LNPKQ9C0E8 428 aa12.74□□□□□ -0.37
NELFE-213ENST00000494956 BTBD7Q9P203 1132 aa12.74□□□□□ -0.37
NELFE-213ENST00000494956 SWAP70Q9UH65 585 aa12.74□□□□□ -0.37
NELFE-213ENST00000494956 SUPT16HQ9Y5B9 1047 aaKnown RBP12.74□□□□□ -0.37
NELFE-213ENST00000494956 GREB1LQ9C091 1923 aaPredicted RBP12.74□□□□□ -0.37
NELFE-213ENST00000494956 PARP14Q460N5 1801 aa12.74□□□□□ -0.37
NELFE-213ENST00000494956 SPDYE16A6NNV3 312 aaPredicted RBP12.73□□□□□ -0.37
NELFE-213ENST00000494956 APPP05067 770 aa12.73□□□□□ -0.37
NELFE-213ENST00000494956 CYP2B6P20813 491 aa12.73□□□□□ -0.37
NELFE-213ENST00000494956 USP14P54578 494 aa12.73□□□□□ -0.37
NELFE-213ENST00000494956 ATP2B2Q01814 1243 aa12.73□□□□□ -0.37
NELFE-213ENST00000494956 ICA1Q05084 483 aa12.73□□□□□ -0.37
NELFE-213ENST00000494956 IRF5Q13568 498 aa12.73□□□□□ -0.37
NELFE-213ENST00000494956 DDRGK1Q96HY6 314 aa12.73□□□□□ -0.37
NELFE-213ENST00000494956 BRCA2P51587 3418 aa12.72□□□□□ -0.37
NELFE-213ENST00000494956 COL11A1P12107 1806 aaPredicted RBP12.72□□□□□ -0.37
NELFE-213ENST00000494956 PRDM1O75626 825 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms