RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 LACTBP83111 547 aaPredicted RBP17.17■□□□□ 0.34
SCAP-213ENST00000494938 ALX1Q15699 326 aa17.17■□□□□ 0.34
SCAP-213ENST00000494938 DDX60LQ5H9U9 1706 aaKnown RBP17.17■□□□□ 0.34
SCAP-213ENST00000494938 ZNF589Q86UQ0 364 aaPredicted RBP17.17■□□□□ 0.34
SCAP-213ENST00000494938 STK11IPQ8N1F8 1099 aa17.17■□□□□ 0.34
SCAP-213ENST00000494938 C12orf42Q96LP6 360 aa17.17■□□□□ 0.34
SCAP-213ENST00000494938 P2RX7Q99572 595 aaKnown RBP17.17■□□□□ 0.34
SCAP-213ENST00000494938 DOCK1Q14185 1865 aa17.16■□□□□ 0.34
SCAP-213ENST00000494938 RASA1P20936 1047 aa17.16■□□□□ 0.34
SCAP-213ENST00000494938 OSBPP22059 807 aa17.16■□□□□ 0.34
SCAP-213ENST00000494938 PABPC4Q13310 644 aaKnown RBP eCLIP17.16■□□□□ 0.34
SCAP-213ENST00000494938 TTC22Q5TAA0 569 aa17.16■□□□□ 0.34
SCAP-213ENST00000494938 FBXO46Q6PJ61 603 aaPredicted RBP17.16■□□□□ 0.34
SCAP-213ENST00000494938 PTPN22Q9Y2R2 807 aa17.16■□□□□ 0.34
SCAP-213ENST00000494938 PHIPQ8WWQ0 1821 aa17.16■□□□□ 0.34
SCAP-213ENST00000494938 MYH1P12882 1939 aa17.15■□□□□ 0.34
SCAP-213ENST00000494938 CAPN15O75808 1086 aa17.15■□□□□ 0.34
SCAP-213ENST00000494938 ZYXQ15942 572 aaKnown RBP17.15■□□□□ 0.34
SCAP-213ENST00000494938 KIAA1755Q5JYT7 1200 aa17.15■□□□□ 0.34
SCAP-213ENST00000494938 POTEEQ6S8J3 1075 aa17.15■□□□□ 0.34
SCAP-213ENST00000494938 CLEC10AQ8IUN9 316 aa17.15■□□□□ 0.34
SCAP-213ENST00000494938 NAPBQ9H115 298 aa17.15■□□□□ 0.34
SCAP-213ENST00000494938 MKNK2Q9HBH9 465 aa17.15■□□□□ 0.34
SCAP-213ENST00000494938 PNMA3Q9UL41 463 aa17.15■□□□□ 0.34
SCAP-213ENST00000494938 HPS5Q9UPZ3 1129 aa17.15■□□□□ 0.34
SCAP-213ENST00000494938 ROBO3Q96MS0 1386 aa17.15■□□□□ 0.34
SCAP-213ENST00000494938 HTTP42858 3142 aa17.14■□□□□ 0.33
SCAP-213ENST00000494938 FGAP02671 866 aa17.14■□□□□ 0.33
SCAP-213ENST00000494938 HSPD1P10809 573 aaKnown RBP17.14■□□□□ 0.33
SCAP-213ENST00000494938 PSMC4P43686 418 aa17.14■□□□□ 0.33
SCAP-213ENST00000494938 USP14P54578 494 aa17.14■□□□□ 0.33
SCAP-213ENST00000494938 PPARAQ07869 468 aa17.14■□□□□ 0.33
SCAP-213ENST00000494938 SMCR8Q8TEV9 937 aaPredicted RBP17.14■□□□□ 0.33
SCAP-213ENST00000494938 TRIM47Q96LD4 638 aa17.14■□□□□ 0.33
SCAP-213ENST00000494938 FEZ1Q99689 392 aa17.14■□□□□ 0.33
SCAP-213ENST00000494938 INCENPQ9NQS7 918 aa17.14■□□□□ 0.33
SCAP-213ENST00000494938 TACC3Q9Y6A5 838 aa17.14■□□□□ 0.33
SCAP-213ENST00000494938 PRDM1O75626 825 aa17.13■□□□□ 0.33
SCAP-213ENST00000494938 ECM2O94769 699 aaPredicted RBP17.13■□□□□ 0.33
SCAP-213ENST00000494938 EEF2P13639 858 aaKnown RBP17.13■□□□□ 0.33
SCAP-213ENST00000494938 GCLCP48506 637 aaPredicted RBP17.13■□□□□ 0.33
SCAP-213ENST00000494938 KIF22Q14807 665 aa17.13■□□□□ 0.33
SCAP-213ENST00000494938 ARHGEF6Q15052 776 aa17.13■□□□□ 0.33
SCAP-213ENST00000494938 CWC27Q6UX04 472 aaKnown RBP17.13■□□□□ 0.33
SCAP-213ENST00000494938 CATSPERGQ6ZRH7 1159 aa17.13■□□□□ 0.33
SCAP-213ENST00000494938 ANKRD13CQ8N6S4 541 aa17.13■□□□□ 0.33
SCAP-213ENST00000494938 KANSL2Q9H9L4 492 aa17.13■□□□□ 0.33
SCAP-213ENST00000494938 ANAPC4Q9UJX5 808 aa17.13■□□□□ 0.33
SCAP-213ENST00000494938 TMX2Q9Y320 296 aa17.13■□□□□ 0.33
SCAP-213ENST00000494938 IGKV6D-41A0A0C4DH26 115 aa17.12■□□□□ 0.33
SCAP-213ENST00000494938 CCDC85CA6NKD9 419 aa17.12■□□□□ 0.33
SCAP-213ENST00000494938 USP17L15C9J2P7 530 aa17.12■□□□□ 0.33
SCAP-213ENST00000494938 USP17L13C9JLJ4 530 aa17.12■□□□□ 0.33
SCAP-213ENST00000494938 USP17L11C9JVI0 530 aa17.12■□□□□ 0.33
SCAP-213ENST00000494938 USP17L18D6R9N7 530 aa17.12■□□□□ 0.33
SCAP-213ENST00000494938 USP17L22D6RA61 530 aa17.12■□□□□ 0.33
SCAP-213ENST00000494938 USP17L17D6RBQ6 530 aa17.12■□□□□ 0.33
SCAP-213ENST00000494938 USP17L19D6RCP7 530 aa17.12■□□□□ 0.33
SCAP-213ENST00000494938 USP17L20D6RJB6 530 aa17.12■□□□□ 0.33
SCAP-213ENST00000494938 HIP1O00291 1037 aa17.12■□□□□ 0.33
SCAP-213ENST00000494938 PEX10O60683 326 aa17.12■□□□□ 0.33
SCAP-213ENST00000494938 VCAM1P19320 739 aa17.12■□□□□ 0.33
SCAP-213ENST00000494938 HERVK_113P62684 666 aa17.12■□□□□ 0.33
SCAP-213ENST00000494938 ICA1Q05084 483 aa17.12■□□□□ 0.33
SCAP-213ENST00000494938 USP17L24Q0WX57 530 aa17.12■□□□□ 0.33
SCAP-213ENST00000494938 CENPQQ7L2Z9 268 aaPredicted RBP17.12■□□□□ 0.33
SCAP-213ENST00000494938 ZNF444Q8N0Y2 327 aaPredicted RBP17.12■□□□□ 0.33
SCAP-213ENST00000494938 RBPJLQ9UBG7 517 aa17.12■□□□□ 0.33
SCAP-213ENST00000494938 CCDC171Q6TFL3 1326 aa17.12■□□□□ 0.33
SCAP-213ENST00000494938 NAV1Q8NEY1 1877 aa17.12■□□□□ 0.33
SCAP-213ENST00000494938 FMNL1O95466 1100 aaPredicted RBP17.11■□□□□ 0.33
SCAP-213ENST00000494938 GNRH1P01148 92 aa17.11■□□□□ 0.33
SCAP-213ENST00000494938 IRX3P78415 501 aaPredicted RBP17.11■□□□□ 0.33
SCAP-213ENST00000494938 CTDSPL2Q05D32 466 aa17.11■□□□□ 0.33
SCAP-213ENST00000494938 RPAP3Q9H6T3 665 aaPredicted RBP17.11■□□□□ 0.33
SCAP-213ENST00000494938 ZNF287Q9HBT7 754 aa17.11■□□□□ 0.33
SCAP-213ENST00000494938 TXNRD2Q9NNW7 524 aa17.11■□□□□ 0.33
SCAP-213ENST00000494938 DIAPH3Q9NSV4 1193 aa17.11■□□□□ 0.33
SCAP-213ENST00000494938 MORF4L1Q9UBU8 362 aa17.11■□□□□ 0.33
SCAP-213ENST00000494938 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.11■□□□□ 0.33
SCAP-213ENST00000494938 MYH7P12883 1935 aa17.1■□□□□ 0.33
SCAP-213ENST00000494938 SLC3A2P08195 630 aaKnown RBP17.1■□□□□ 0.33
SCAP-213ENST00000494938 FGRP09769 529 aa17.1■□□□□ 0.33
SCAP-213ENST00000494938 PDE4BQ07343 736 aa17.1■□□□□ 0.33
SCAP-213ENST00000494938 FAM110CQ1W6H9 321 aa17.1■□□□□ 0.33
SCAP-213ENST00000494938 Q3C1V9 767 aa17.1■□□□□ 0.33
SCAP-213ENST00000494938 FAM47AQ5JRC9 791 aa17.1■□□□□ 0.33
SCAP-213ENST00000494938 SKAP1Q86WV1 359 aa17.1■□□□□ 0.33
SCAP-213ENST00000494938 NEDD1Q8NHV4 660 aa17.1■□□□□ 0.33
SCAP-213ENST00000494938 IL25Q9H293 177 aa17.1■□□□□ 0.33
SCAP-213ENST00000494938 VCPKMTQ9H867 229 aa17.1■□□□□ 0.33
SCAP-213ENST00000494938 ARHGEF10LQ9HCE6 1279 aa17.1■□□□□ 0.33
SCAP-213ENST00000494938 NYAP2Q9P242 653 aa17.1■□□□□ 0.33
SCAP-213ENST00000494938 SRRDQ9UH36 339 aa17.1■□□□□ 0.33
SCAP-213ENST00000494938 MFAP1P55081 439 aaKnown RBP17.09■□□□□ 0.33
SCAP-213ENST00000494938 FCGRTP55899 365 aa17.09■□□□□ 0.33
SCAP-213ENST00000494938 TFAP4Q01664 338 aa17.09■□□□□ 0.33
SCAP-213ENST00000494938 ATP2B2Q01814 1243 aa17.09■□□□□ 0.33
SCAP-213ENST00000494938 MKL1Q969V6 931 aa17.09■□□□□ 0.33
SCAP-213ENST00000494938 PTCH2Q9Y6C5 1203 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms