RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 GPT2Q8TD30 523 aa7.92□□□□□ -1.14
MSH5-217ENST00000494458 MKL1Q969V6 931 aa7.92□□□□□ -1.14
MSH5-217ENST00000494458 CHAMP1Q96JM3 812 aa7.92□□□□□ -1.14
MSH5-217ENST00000494458 PRMT6Q96LA8 375 aaPredicted RBP7.92□□□□□ -1.14
MSH5-217ENST00000494458 ZKSCAN3Q9BRR0 538 aa7.92□□□□□ -1.14
MSH5-217ENST00000494458 RNF26Q9BY78 433 aaPredicted RBP7.92□□□□□ -1.14
MSH5-217ENST00000494458 RBM28Q9NW13 759 aaKnown RBP7.92□□□□□ -1.14
MSH5-217ENST00000494458 ORC3Q9UBD5 711 aaPredicted RBP7.92□□□□□ -1.14
MSH5-217ENST00000494458 RCOR1Q9UKL0 485 aa7.92□□□□□ -1.14
MSH5-217ENST00000494458 MORC2Q9Y6X9 1032 aaPredicted RBP7.92□□□□□ -1.14
MSH5-217ENST00000494458 NAV1Q8NEY1 1877 aa7.92□□□□□ -1.14
MSH5-217ENST00000494458 PALM3A6NDB9 673 aaPredicted RBP7.91□□□□□ -1.14
MSH5-217ENST00000494458 NMT2O60551 498 aa7.91□□□□□ -1.14
MSH5-217ENST00000494458 DTNBO60941 627 aa7.91□□□□□ -1.14
MSH5-217ENST00000494458 PRPF40AO75400 957 aaKnown RBP7.91□□□□□ -1.14
MSH5-217ENST00000494458 SNHG28P0DPA3 235 aa7.91□□□□□ -1.14
MSH5-217ENST00000494458 RPS12P25398 132 aaKnown RBP7.91□□□□□ -1.14
MSH5-217ENST00000494458 SHMT1P34896 483 aa7.91□□□□□ -1.14
MSH5-217ENST00000494458 SCNN1DP51172 638 aa7.91□□□□□ -1.14
MSH5-217ENST00000494458 PRELPP51888 382 aa7.91□□□□□ -1.14
MSH5-217ENST00000494458 CXCL9Q07325 125 aa7.91□□□□□ -1.14
MSH5-217ENST00000494458 RTN1Q16799 776 aa7.91□□□□□ -1.14
MSH5-217ENST00000494458 CFAP100Q494V2 611 aa7.91□□□□□ -1.14
MSH5-217ENST00000494458 FAM47AQ5JRC9 791 aa7.91□□□□□ -1.14
MSH5-217ENST00000494458 RRP12Q5JTH9 1297 aaKnown RBP7.91□□□□□ -1.14
MSH5-217ENST00000494458 CPLX2Q6PUV4 134 aaKnown RBP7.91□□□□□ -1.14
MSH5-217ENST00000494458 SYNE3Q6ZMZ3 975 aa7.91□□□□□ -1.14
MSH5-217ENST00000494458 TMTC3Q6ZXV5 915 aa7.91□□□□□ -1.14
MSH5-217ENST00000494458 CATIPQ7Z7H3 387 aa7.91□□□□□ -1.14
MSH5-217ENST00000494458 MICU3Q86XE3 530 aa7.91□□□□□ -1.14
MSH5-217ENST00000494458 KIAA0825Q8IV33 1275 aa7.91□□□□□ -1.14
MSH5-217ENST00000494458 ZFPM1Q8IX07 1006 aa7.91□□□□□ -1.14
MSH5-217ENST00000494458 ZNF444Q8N0Y2 327 aaPredicted RBP7.91□□□□□ -1.14
MSH5-217ENST00000494458 LARGE2Q8N3Y3 721 aa7.91□□□□□ -1.14
MSH5-217ENST00000494458 FAM184AQ8NB25 1140 aa7.91□□□□□ -1.14
MSH5-217ENST00000494458 SLC44A5Q8NCS7 719 aa7.91□□□□□ -1.14
MSH5-217ENST00000494458 DPF2Q92785 391 aa7.91□□□□□ -1.14
MSH5-217ENST00000494458 DDX11Q96FC9 970 aa7.91□□□□□ -1.14
MSH5-217ENST00000494458 CCDC17Q96LX7 622 aa7.91□□□□□ -1.14
MSH5-217ENST00000494458 SCAND2PQ9GZW5 306 aaPredicted RBP7.91□□□□□ -1.14
MSH5-217ENST00000494458 TAOK3Q9H2K8 898 aa7.91□□□□□ -1.14
MSH5-217ENST00000494458 DNAJC18Q9H819 358 aa7.91□□□□□ -1.14
MSH5-217ENST00000494458 ZNF277Q9NRM2 450 aaPredicted RBP7.91□□□□□ -1.14
MSH5-217ENST00000494458 PI4KBQ9UBF8 816 aa7.91□□□□□ -1.14
MSH5-217ENST00000494458 SERPINB13Q9UIV8 391 aa7.91□□□□□ -1.14
MSH5-217ENST00000494458 PCDHAC2Q9Y5I4 1007 aa7.91□□□□□ -1.14
MSH5-217ENST00000494458 GREB1LQ9C091 1923 aaPredicted RBP7.91□□□□□ -1.14
MSH5-217ENST00000494458 FSD2A1L4K1 749 aa7.9□□□□□ -1.14
MSH5-217ENST00000494458 TSPY2A6NKD2 308 aa7.9□□□□□ -1.14
MSH5-217ENST00000494458 F8W031 263 aaPredicted RBP7.9□□□□□ -1.14
MSH5-217ENST00000494458 CPLX1O14810 134 aa7.9□□□□□ -1.14
MSH5-217ENST00000494458 TBC1D12O60347 775 aa7.9□□□□□ -1.14
MSH5-217ENST00000494458 DEXIO95424 95 aa7.9□□□□□ -1.14
MSH5-217ENST00000494458 MBD3O95983 291 aa7.9□□□□□ -1.14
MSH5-217ENST00000494458 UBE2HP62256 183 aa7.9□□□□□ -1.14
MSH5-217ENST00000494458 KIF23Q02241 960 aaPredicted RBP7.9□□□□□ -1.14
MSH5-217ENST00000494458 DNM1Q05193 864 aaKnown RBP7.9□□□□□ -1.14
MSH5-217ENST00000494458 SSRP1Q08945 709 aaKnown RBP7.9□□□□□ -1.14
MSH5-217ENST00000494458 GSE1Q14687 1217 aa7.9□□□□□ -1.14
MSH5-217ENST00000494458 GRM4Q14833 912 aa7.9□□□□□ -1.14
MSH5-217ENST00000494458 NPY5RQ15761 445 aa7.9□□□□□ -1.14
MSH5-217ENST00000494458 SLC35G1Q2M3R5 365 aa7.9□□□□□ -1.14
MSH5-217ENST00000494458 KRT40Q6A162 431 aa7.9□□□□□ -1.14
MSH5-217ENST00000494458 NFXL1Q6ZNB6 911 aa7.9□□□□□ -1.14
MSH5-217ENST00000494458 BRAPQ7Z569 592 aa7.9□□□□□ -1.14
MSH5-217ENST00000494458 FAM83AQ86UY5 434 aa7.9□□□□□ -1.14
MSH5-217ENST00000494458 SRBD1Q8N5C6 995 aaKnown RBP7.9□□□□□ -1.14
MSH5-217ENST00000494458 WASF1Q92558 559 aa7.9□□□□□ -1.14
MSH5-217ENST00000494458 SHISA4Q96DD7 197 aa7.9□□□□□ -1.14
MSH5-217ENST00000494458 TMEM47Q9BQJ4 181 aa7.9□□□□□ -1.14
MSH5-217ENST00000494458 MYL10Q9BUA6 226 aa7.9□□□□□ -1.14
MSH5-217ENST00000494458 MKNK2Q9HBH9 465 aa7.9□□□□□ -1.14
MSH5-217ENST00000494458 TOMM22Q9NS69 142 aa7.9□□□□□ -1.14
MSH5-217ENST00000494458 MTMR4Q9NYA4 1195 aa7.9□□□□□ -1.14
MSH5-217ENST00000494458 RTEL1Q9NZ71 1219 aa7.9□□□□□ -1.14
MSH5-217ENST00000494458 SAP30BPQ9UHR5 308 aaKnown RBP7.9□□□□□ -1.14
MSH5-217ENST00000494458 MAD2L2Q9UI95 211 aa7.9□□□□□ -1.14
MSH5-217ENST00000494458 SYNPO2Q9UMS6 1093 aa7.9□□□□□ -1.14
MSH5-217ENST00000494458 CNPY2Q9Y2B0 182 aa7.9□□□□□ -1.14
MSH5-217ENST00000494458 MYH1P12882 1939 aa7.9□□□□□ -1.15
MSH5-217ENST00000494458 SIPA1L1O43166 1804 aa7.89□□□□□ -1.15
MSH5-217ENST00000494458 ECM29Q5VYK3 1845 aa7.89□□□□□ -1.15
MSH5-217ENST00000494458 ARFGEF1Q9Y6D6 1849 aa7.89□□□□□ -1.15
MSH5-217ENST00000494458 VPS37CA5D8V6 355 aaPredicted RBP7.89□□□□□ -1.15
MSH5-217ENST00000494458 DDTLA6NHG4 134 aaPredicted RBP7.89□□□□□ -1.15
MSH5-217ENST00000494458 H3BQV1 296 aa7.89□□□□□ -1.15
MSH5-217ENST00000494458 TOP1P11387 765 aaKnown RBP7.89□□□□□ -1.15
MSH5-217ENST00000494458 RXRAP19793 462 aa7.89□□□□□ -1.15
MSH5-217ENST00000494458 GUCY1A2P33402 732 aa7.89□□□□□ -1.15
MSH5-217ENST00000494458 NASPP49321 788 aaPredicted RBP7.89□□□□□ -1.15
MSH5-217ENST00000494458 GNAQP50148 359 aa7.89□□□□□ -1.15
MSH5-217ENST00000494458 ZNF445P59923 1031 aa7.89□□□□□ -1.15
MSH5-217ENST00000494458 KRT85P78386 507 aa7.89□□□□□ -1.15
MSH5-217ENST00000494458 TNIP1Q15025 636 aa7.89□□□□□ -1.15
MSH5-217ENST00000494458 CSPP1Q1MSJ5 1256 aa7.89□□□□□ -1.15
MSH5-217ENST00000494458 PPP4R3BQ5MIZ7 849 aa7.89□□□□□ -1.15
MSH5-217ENST00000494458 IFFO2Q5TF58 517 aa7.89□□□□□ -1.15
MSH5-217ENST00000494458 SIAH1Q8IUQ4 282 aa7.89□□□□□ -1.15
MSH5-217ENST00000494458 NIM1KQ8IY84 436 aa7.89□□□□□ -1.15
MSH5-217ENST00000494458 PNMA1Q8ND90 353 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms