RNA–Protein interactions for RNA: ENST00000494340.1

LINC02008-202, Transcript of long intergenic non-protein coding RNA 2008, humanhuman

TSL 2

Gene LINC02008, Length 524 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02008-202ENST00000494340 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.72□□□□□ -0.537e-6■□□□□ 9.4
LINC02008-202ENST00000494340 PAG1Q9NWQ8 432 aa11.72□□□□□ -0.53
LINC02008-202ENST00000494340 RBPJLQ9UBG7 517 aa11.72□□□□□ -0.53
LINC02008-202ENST00000494340 SWAP70Q9UH65 585 aa11.72□□□□□ -0.53
LINC02008-202ENST00000494340 RABGAP1Q9Y3P9 1069 aa11.72□□□□□ -0.53
LINC02008-202ENST00000494340 MYH8P13535 1937 aa11.71□□□□□ -0.53
LINC02008-202ENST00000494340 ADD2P35612 726 aa11.71□□□□□ -0.53
LINC02008-202ENST00000494340 PLCD1P51178 756 aa11.71□□□□□ -0.53
LINC02008-202ENST00000494340 CCNA1P78396 465 aa11.71□□□□□ -0.53
LINC02008-202ENST00000494340 SHROOM1Q2M3G4 852 aaPredicted RBP11.71□□□□□ -0.53
LINC02008-202ENST00000494340 MAP3K21Q5TCX8 1036 aa11.71□□□□□ -0.53
LINC02008-202ENST00000494340 CATSPERGQ6ZRH7 1159 aa11.71□□□□□ -0.53
LINC02008-202ENST00000494340 USP6NLQ92738 828 aa11.71□□□□□ -0.53
LINC02008-202ENST00000494340 DPF3Q92784 378 aa11.71□□□□□ -0.53
LINC02008-202ENST00000494340 DNAJC2Q99543 621 aaKnown RBP11.71□□□□□ -0.53
LINC02008-202ENST00000494340 FEZ1Q99689 392 aa11.71□□□□□ -0.53
LINC02008-202ENST00000494340 HAUS7Q99871 368 aa11.71□□□□□ -0.53
LINC02008-202ENST00000494340 TXNRD2Q9NNW7 524 aa11.71□□□□□ -0.53
LINC02008-202ENST00000494340 HMX1Q9NP08 348 aaPredicted RBP11.71□□□□□ -0.53
LINC02008-202ENST00000494340 DCP1AQ9NPI6 582 aaPredicted RBP11.71□□□□□ -0.53
LINC02008-202ENST00000494340 ATP8A2Q9NTI2 1148 aa11.71□□□□□ -0.53
LINC02008-202ENST00000494340 MCM9Q9NXL9 1143 aa11.71□□□□□ -0.53
LINC02008-202ENST00000494340 NR2E3Q9Y5X4 410 aa11.71□□□□□ -0.53
LINC02008-202ENST00000494340 H0YGN5 161 aa11.7□□□□□ -0.54
LINC02008-202ENST00000494340 GLRX3O76003 335 aaKnown RBP11.7□□□□□ -0.54
LINC02008-202ENST00000494340 TFRCP02786 760 aaKnown RBP11.7□□□□□ -0.54
LINC02008-202ENST00000494340 RAB3GAP1Q15042 981 aa11.7□□□□□ -0.54
LINC02008-202ENST00000494340 UBE3CQ15386 1083 aa11.7□□□□□ -0.54
LINC02008-202ENST00000494340 ZSCAN25Q6NSZ9 544 aa11.7□□□□□ -0.54
LINC02008-202ENST00000494340 DEFB118Q96PH6 123 aa11.7□□□□□ -0.54
LINC02008-202ENST00000494340 LRRCC1Q9C099 1032 aa11.7□□□□□ -0.54
LINC02008-202ENST00000494340 CEP290O15078 2479 aa11.69□□□□□ -0.54
LINC02008-202ENST00000494340 APBB1O00213 710 aa11.69□□□□□ -0.54
LINC02008-202ENST00000494340 VCAM1P19320 739 aa11.69□□□□□ -0.54
LINC02008-202ENST00000494340 GUCY1A2P33402 732 aa11.69□□□□□ -0.54
LINC02008-202ENST00000494340 RGS2P41220 211 aa11.69□□□□□ -0.54
LINC02008-202ENST00000494340 Q3C1V9 767 aa11.69□□□□□ -0.54
LINC02008-202ENST00000494340 MORN1Q5T089 497 aa11.69□□□□□ -0.54
LINC02008-202ENST00000494340 TMEM179Q6ZVK1 233 aa11.69□□□□□ -0.54
LINC02008-202ENST00000494340 GPR142Q7Z601 462 aa11.69□□□□□ -0.54
LINC02008-202ENST00000494340 NECAB2Q7Z6G3 386 aa11.69□□□□□ -0.54
LINC02008-202ENST00000494340 PLEKHH3Q7Z736 793 aa11.69□□□□□ -0.54
LINC02008-202ENST00000494340 CCAR1Q8IX12 1150 aaKnown RBP11.69□□□□□ -0.54
LINC02008-202ENST00000494340 LCORLQ8N3X6 602 aa11.69□□□□□ -0.54
LINC02008-202ENST00000494340 TRIB2Q92519 343 aa11.69□□□□□ -0.54
LINC02008-202ENST00000494340 APBA2Q99767 749 aa11.69□□□□□ -0.54
LINC02008-202ENST00000494340 BOLA2Q9H3K6 86 aa11.69□□□□□ -0.54
LINC02008-202ENST00000494340 COLQQ9Y215 455 aaPredicted RBP11.69□□□□□ -0.54
LINC02008-202ENST00000494340 ZNF236Q9UL36 1845 aa11.68□□□□□ -0.54
LINC02008-202ENST00000494340 A0A1W2PPC1 479 aa11.68□□□□□ -0.54
LINC02008-202ENST00000494340 CNMDO75829 334 aa11.68□□□□□ -0.54
LINC02008-202ENST00000494340 ZKSCAN1P17029 563 aaPredicted RBP11.68□□□□□ -0.54
LINC02008-202ENST00000494340 FXR1P51114 621 aaKnown RBP eCLIP11.68□□□□□ -0.54
LINC02008-202ENST00000494340 POTEEQ6S8J3 1075 aa11.68□□□□□ -0.54
LINC02008-202ENST00000494340 AMOTL1Q8IY63 956 aa11.68□□□□□ -0.54
LINC02008-202ENST00000494340 ACER1Q8TDN7 264 aa11.68□□□□□ -0.54
LINC02008-202ENST00000494340 SDR42E1Q8WUS8 393 aa11.68□□□□□ -0.54
LINC02008-202ENST00000494340 LPAR1Q92633 364 aa11.68□□□□□ -0.54
LINC02008-202ENST00000494340 DDRGK1Q96HY6 314 aa11.68□□□□□ -0.54
LINC02008-202ENST00000494340 CCDC17Q96LX7 622 aa11.68□□□□□ -0.54
LINC02008-202ENST00000494340 PORCNQ9H237 461 aa11.68□□□□□ -0.54
LINC02008-202ENST00000494340 SH2D4AQ9H788 454 aa11.68□□□□□ -0.54
LINC02008-202ENST00000494340 OGDHLQ9ULD0 1010 aa11.68□□□□□ -0.54
LINC02008-202ENST00000494340 A0A0G2JMZ2 1700 aa11.68□□□□□ -0.54
LINC02008-202ENST00000494340 BAZ2AQ9UIF9 1905 aaKnown RBP11.67□□□□□ -0.54
LINC02008-202ENST00000494340 SLC15A5A6NIM6 579 aa11.67□□□□□ -0.54
LINC02008-202ENST00000494340 SPDYE16A6NNV3 312 aaPredicted RBP11.67□□□□□ -0.54
LINC02008-202ENST00000494340 MBD4O95243 580 aa11.67□□□□□ -0.54
LINC02008-202ENST00000494340 HOXC6P09630 235 aa11.67□□□□□ -0.54
LINC02008-202ENST00000494340 CYP2B6P20813 491 aa11.67□□□□□ -0.54
LINC02008-202ENST00000494340 MAP2K5Q13163 448 aa11.67□□□□□ -0.54
LINC02008-202ENST00000494340 SEPT2Q15019 361 aa11.67□□□□□ -0.54
LINC02008-202ENST00000494340 ZYXQ15942 572 aaKnown RBP11.67□□□□□ -0.54
LINC02008-202ENST00000494340 MB21D1Q8N884 522 aa11.67□□□□□ -0.54
LINC02008-202ENST00000494340 EDC3Q96F86 508 aaKnown RBP11.67□□□□□ -0.54
LINC02008-202ENST00000494340 PAGR1Q9BTK6 254 aa11.67□□□□□ -0.54
LINC02008-202ENST00000494340 PRO3102Q9H379 93 aa11.67□□□□□ -0.54
LINC02008-202ENST00000494340 RPAP3Q9H6T3 665 aaPredicted RBP11.67□□□□□ -0.54
LINC02008-202ENST00000494340 ARMT1Q9H993 441 aa11.67□□□□□ -0.54
LINC02008-202ENST00000494340 HOXC10Q9NYD6 342 aa11.67□□□□□ -0.54
LINC02008-202ENST00000494340 RLFQ13129 1914 aa11.66□□□□□ -0.54
LINC02008-202ENST00000494340 ALPK3Q96L96 1907 aa11.66□□□□□ -0.54
LINC02008-202ENST00000494340 EVI5O60447 810 aa11.66□□□□□ -0.54
LINC02008-202ENST00000494340 PRKAR2AP13861 404 aaKnown RBP11.66□□□□□ -0.54
LINC02008-202ENST00000494340 PTPREP23469 700 aa11.66□□□□□ -0.54
LINC02008-202ENST00000494340 GRB14Q14449 540 aa11.66□□□□□ -0.54
LINC02008-202ENST00000494340 COG2Q14746 738 aa11.66□□□□□ -0.54
LINC02008-202ENST00000494340 C12orf60Q5U649 245 aa11.66□□□□□ -0.54
LINC02008-202ENST00000494340 GIMAP6Q6P9H5 292 aa11.66□□□□□ -0.54
LINC02008-202ENST00000494340 CHRDL2Q6WN34 429 aa11.66□□□□□ -0.54
LINC02008-202ENST00000494340 C16orf86Q6ZW13 317 aa11.66□□□□□ -0.54
LINC02008-202ENST00000494340 SHCBP1Q8NEM2 672 aa11.66□□□□□ -0.54
LINC02008-202ENST00000494340 GPATCH3Q96I76 525 aa11.66□□□□□ -0.54
LINC02008-202ENST00000494340 PAWRQ96IZ0 340 aaKnown RBP11.66□□□□□ -0.54
LINC02008-202ENST00000494340 NBPF3Q9H094 633 aa11.66□□□□□ -0.54
LINC02008-202ENST00000494340 DCTPP1Q9H773 170 aa11.66□□□□□ -0.54
LINC02008-202ENST00000494340 ARHGEF10LQ9HCE6 1279 aa11.66□□□□□ -0.54
LINC02008-202ENST00000494340 CWC22Q9HCG8 908 aaKnown RBP11.66□□□□□ -0.54
LINC02008-202ENST00000494340 ECHDC1Q9NTX5 307 aa11.66□□□□□ -0.54
LINC02008-202ENST00000494340 ARPP21Q9UBL0 812 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms