RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 GRM4Q14833 912 aa12.31□□□□□ -0.44
CLCN6-208ENST00000494028 SLC39A14Q15043 492 aa12.31□□□□□ -0.44
CLCN6-208ENST00000494028 SF3A1Q15459 793 aaKnown RBP12.31□□□□□ -0.44
CLCN6-208ENST00000494028 AXDND1Q5T1B0 1012 aaPredicted RBP12.31□□□□□ -0.44
CLCN6-208ENST00000494028 ADALQ6DHV7 355 aa12.31□□□□□ -0.44
CLCN6-208ENST00000494028 DGKHQ86XP1 1220 aa12.31□□□□□ -0.44
CLCN6-208ENST00000494028 FAM43AQ8N2R8 423 aa12.31□□□□□ -0.44
CLCN6-208ENST00000494028 SRBD1Q8N5C6 995 aaKnown RBP12.31□□□□□ -0.44
CLCN6-208ENST00000494028 MXD3Q9BW11 206 aa12.31□□□□□ -0.44
CLCN6-208ENST00000494028 FOXP1Q9H334 677 aaPredicted RBP12.31□□□□□ -0.44
CLCN6-208ENST00000494028 KAT14Q9H8E8 782 aa12.31□□□□□ -0.44
CLCN6-208ENST00000494028 VPS54Q9P1Q0 977 aa12.31□□□□□ -0.44
CLCN6-208ENST00000494028 USP17L3A6NCW0 530 aa12.3□□□□□ -0.44
CLCN6-208ENST00000494028 USP17L4A6NCW7 530 aa12.3□□□□□ -0.44
CLCN6-208ENST00000494028 BTBD18B2RXH4 712 aa12.3□□□□□ -0.44
CLCN6-208ENST00000494028 H0YIN7 160 aa12.3□□□□□ -0.44
CLCN6-208ENST00000494028 CTAGE5O15320 804 aa12.3□□□□□ -0.44
CLCN6-208ENST00000494028 KINO60870 393 aaKnown RBP12.3□□□□□ -0.44
CLCN6-208ENST00000494028 PPP6R2O75170 966 aa12.3□□□□□ -0.44
CLCN6-208ENST00000494028 CDK8P49336 464 aa12.3□□□□□ -0.44
CLCN6-208ENST00000494028 NR5A1Q13285 461 aa12.3□□□□□ -0.44
CLCN6-208ENST00000494028 SAFBQ15424 915 aaKnown RBP eCLIP12.3□□□□□ -0.44
CLCN6-208ENST00000494028 NPY5RQ15761 445 aa12.3□□□□□ -0.44
CLCN6-208ENST00000494028 CCDC178Q5BJE1 867 aa12.3□□□□□ -0.44
CLCN6-208ENST00000494028 USP17L1Q7RTZ2 530 aa12.3□□□□□ -0.44
CLCN6-208ENST00000494028 CCDC82Q8N4S0 544 aa12.3□□□□□ -0.44
CLCN6-208ENST00000494028 PNMA1Q8ND90 353 aa12.3□□□□□ -0.44
CLCN6-208ENST00000494028 FAM200AQ8TCP9 573 aa12.3□□□□□ -0.44
CLCN6-208ENST00000494028 OXER1Q8TDS5 423 aa12.3□□□□□ -0.44
CLCN6-208ENST00000494028 PHF20Q9BVI0 1012 aa12.3□□□□□ -0.44
CLCN6-208ENST00000494028 DBNDD1Q9H9R9 158 aa12.3□□□□□ -0.44
CLCN6-208ENST00000494028 DDX4Q9NQI0 724 aaKnown RBP12.3□□□□□ -0.44
CLCN6-208ENST00000494028 RRAGDQ9NQL2 400 aaPredicted RBP12.3□□□□□ -0.44
CLCN6-208ENST00000494028 TTF2Q9UNY4 1162 aaKnown RBP12.3□□□□□ -0.44
CLCN6-208ENST00000494028 BAZ2BQ9UIF8 2168 aaKnown RBP12.3□□□□□ -0.44
CLCN6-208ENST00000494028 FER1L6Q2WGJ9 1857 aa12.29□□□□□ -0.44
CLCN6-208ENST00000494028 COL2A1P02458 1487 aaPredicted RBP12.29□□□□□ -0.44
CLCN6-208ENST00000494028 FAM237AA0A1B0GTK4 181 aa12.29□□□□□ -0.44
CLCN6-208ENST00000494028 hCG_1642624A0A1W2PR95 340 aa12.29□□□□□ -0.44
CLCN6-208ENST00000494028 FAM205CA6NFA0 338 aa12.29□□□□□ -0.44
CLCN6-208ENST00000494028 WDHD1O75717 1129 aaPredicted RBP12.29□□□□□ -0.44
CLCN6-208ENST00000494028 TSPY3P0CV98 308 aa12.29□□□□□ -0.44
CLCN6-208ENST00000494028 TSPY8P0CW00 308 aa12.29□□□□□ -0.44
CLCN6-208ENST00000494028 PFKFB1P16118 471 aa12.29□□□□□ -0.44
CLCN6-208ENST00000494028 TOB1P50616 345 aaPredicted RBP12.29□□□□□ -0.44
CLCN6-208ENST00000494028 NDUFA8P51970 172 aa12.29□□□□□ -0.44
CLCN6-208ENST00000494028 FKBP1AP62942 108 aaKnown RBP12.29□□□□□ -0.44
CLCN6-208ENST00000494028 AKAP17AQ02040 695 aaKnown RBP12.29□□□□□ -0.44
CLCN6-208ENST00000494028 GABPAQ06546 454 aa12.29□□□□□ -0.44
CLCN6-208ENST00000494028 SLC35G1Q2M3R5 365 aa12.29□□□□□ -0.44
CLCN6-208ENST00000494028 C7orf43Q8WVR3 580 aa12.29□□□□□ -0.44
CLCN6-208ENST00000494028 TNFRSF25Q93038 417 aa12.29□□□□□ -0.44
CLCN6-208ENST00000494028 CNKSR1Q969H4 720 aa12.29□□□□□ -0.44
CLCN6-208ENST00000494028 MKNK2Q9HBH9 465 aa12.29□□□□□ -0.44
CLCN6-208ENST00000494028 USP25Q9UHP3 1055 aa12.29□□□□□ -0.44
CLCN6-208ENST00000494028 HPSEQ9Y251 543 aa12.29□□□□□ -0.44
CLCN6-208ENST00000494028 MYO3BQ8WXR4 1341 aa12.29□□□□□ -0.44
CLCN6-208ENST00000494028 A0A1B0GVL5 298 aa12.28□□□□□ -0.44
CLCN6-208ENST00000494028 F8W031 263 aaPredicted RBP12.28□□□□□ -0.44
CLCN6-208ENST00000494028 ECE2O60344 883 aa12.28□□□□□ -0.44
CLCN6-208ENST00000494028 SCG2P13521 617 aa12.28□□□□□ -0.44
CLCN6-208ENST00000494028 MARCKSP29966 332 aaPredicted RBP12.28□□□□□ -0.44
CLCN6-208ENST00000494028 KIF5BP33176 963 aa12.28□□□□□ -0.44
CLCN6-208ENST00000494028 KRT2P35908 639 aa12.28□□□□□ -0.44
CLCN6-208ENST00000494028 NOVP48745 357 aa12.28□□□□□ -0.44
CLCN6-208ENST00000494028 ANO6Q4KMQ2 910 aa12.28□□□□□ -0.44
CLCN6-208ENST00000494028 RILPL1Q5EBL4 403 aa12.28□□□□□ -0.44
CLCN6-208ENST00000494028 DACT2Q5SW24 774 aa12.28□□□□□ -0.44
CLCN6-208ENST00000494028 RASGRP2Q7LDG7 609 aa12.28□□□□□ -0.44
CLCN6-208ENST00000494028 JMYQ8N9B5 988 aa12.28□□□□□ -0.44
CLCN6-208ENST00000494028 NEDD1Q8NHV4 660 aa12.28□□□□□ -0.44
CLCN6-208ENST00000494028 OSBPL5Q9H0X9 879 aaPredicted RBP12.28□□□□□ -0.44
CLCN6-208ENST00000494028 TMX4Q9H1E5 349 aaPredicted RBP12.28□□□□□ -0.44
CLCN6-208ENST00000494028 ZNF287Q9HBT7 754 aa12.28□□□□□ -0.44
CLCN6-208ENST00000494028 MORC2Q9Y6X9 1032 aaPredicted RBP12.28□□□□□ -0.44
CLCN6-208ENST00000494028 CUTAO60888 179 aa12.27□□□□□ -0.45
CLCN6-208ENST00000494028 XBP1P17861 261 aa12.27□□□□□ -0.45
CLCN6-208ENST00000494028 CRKP46108 304 aa12.27□□□□□ -0.45
CLCN6-208ENST00000494028 SCNN1DP51172 638 aa12.27□□□□□ -0.45
CLCN6-208ENST00000494028 PICALMQ13492 652 aa12.27□□□□□ -0.45
CLCN6-208ENST00000494028 R3HDM1Q15032 1099 aaKnown RBP12.27□□□□□ -0.45
CLCN6-208ENST00000494028 STX1AQ16623 288 aa12.27□□□□□ -0.45
CLCN6-208ENST00000494028 PFKFB3Q16875 520 aaPredicted RBP12.27□□□□□ -0.45
CLCN6-208ENST00000494028 RESP18Q5W5W9 173 aa12.27□□□□□ -0.45
CLCN6-208ENST00000494028 SHC4Q6S5L8 630 aa12.27□□□□□ -0.45
CLCN6-208ENST00000494028 SASS6Q6UVJ0 657 aa12.27□□□□□ -0.45
CLCN6-208ENST00000494028 HHIPL2Q6UWX4 724 aa12.27□□□□□ -0.45
CLCN6-208ENST00000494028 C11orf57Q6ZUT1 292 aaPredicted RBP12.27□□□□□ -0.45
CLCN6-208ENST00000494028 PODNQ7Z5L7 613 aa12.27□□□□□ -0.45
CLCN6-208ENST00000494028 TEKT1Q969V4 418 aa12.27□□□□□ -0.45
CLCN6-208ENST00000494028 TRIM44Q96DX7 344 aaPredicted RBP12.27□□□□□ -0.45
CLCN6-208ENST00000494028 TMEM47Q9BQJ4 181 aa12.27□□□□□ -0.45
CLCN6-208ENST00000494028 CBX8Q9HC52 389 aa12.27□□□□□ -0.45
CLCN6-208ENST00000494028 RTN4Q9NQC3 1192 aaKnown RBP12.27□□□□□ -0.45
CLCN6-208ENST00000494028 MAD2L2Q9UI95 211 aa12.27□□□□□ -0.45
CLCN6-208ENST00000494028 FBXO2Q9UK22 296 aaPredicted RBP12.27□□□□□ -0.45
CLCN6-208ENST00000494028 IGKV6D-41A0A0C4DH26 115 aa12.26□□□□□ -0.45
CLCN6-208ENST00000494028 PSDA5PKW4 1024 aaPredicted RBP12.26□□□□□ -0.45
CLCN6-208ENST00000494028 AP5Z1O43299 807 aa12.26□□□□□ -0.45
CLCN6-208ENST00000494028 CMA1P23946 247 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms