RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 LDLRAD1Q5T700 205 aa17.51■□□□□ 0.39
ACTB-213ENST00000493945 NFXL1Q6ZNB6 911 aa17.51■□□□□ 0.39
ACTB-213ENST00000493945 ZKSCAN4Q969J2 545 aaPredicted RBP17.51■□□□□ 0.39
ACTB-213ENST00000493945 KAT14Q9H8E8 782 aa17.51■□□□□ 0.39
ACTB-213ENST00000493945 ZSWIM6Q9HCJ5 1215 aa17.51■□□□□ 0.39
ACTB-213ENST00000493945 GOPCQ9HD26 462 aa17.51■□□□□ 0.39
ACTB-213ENST00000493945 CREBZFQ9NS37 354 aa17.51■□□□□ 0.39
ACTB-213ENST00000493945 NYAP2Q9P242 653 aa17.51■□□□□ 0.39
ACTB-213ENST00000493945 CCDC69A6NI79 296 aa17.5■□□□□ 0.39
ACTB-213ENST00000493945 SPDYE5A6NIY4 337 aa17.5■□□□□ 0.39
ACTB-213ENST00000493945 UBE2Q2LH0YL09 131 aa17.5■□□□□ 0.39
ACTB-213ENST00000493945 SEPT2Q15019 361 aa17.5■□□□□ 0.39
ACTB-213ENST00000493945 ADCK5Q3MIX3 580 aa17.5■□□□□ 0.39
ACTB-213ENST00000493945 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.5■□□□□ 0.39
ACTB-213ENST00000493945 CHMP4CQ96CF2 233 aa17.5■□□□□ 0.39
ACTB-213ENST00000493945 CEP95Q96GE4 821 aa17.5■□□□□ 0.39
ACTB-213ENST00000493945 ELP3Q9H9T3 547 aa17.5■□□□□ 0.39
ACTB-213ENST00000493945 PDRG1Q9NUG6 133 aa17.5■□□□□ 0.39
ACTB-213ENST00000493945 MTMR4Q9NYA4 1195 aa17.5■□□□□ 0.39
ACTB-213ENST00000493945 SNCAIPQ9Y6H5 919 aa17.5■□□□□ 0.39
ACTB-213ENST00000493945 TLL2Q9Y6L7 1015 aa17.5■□□□□ 0.39
ACTB-213ENST00000493945 CALM1P0DP23 149 aa17.49■□□□□ 0.39
ACTB-213ENST00000493945 CALM2P0DP24 149 aa17.49■□□□□ 0.39
ACTB-213ENST00000493945 CALM3P0DP25 149 aa17.49■□□□□ 0.39
ACTB-213ENST00000493945 ZBTB48P10074 688 aaPredicted RBP17.49■□□□□ 0.39
ACTB-213ENST00000493945 TOP1P11387 765 aaKnown RBP17.49■□□□□ 0.39
ACTB-213ENST00000493945 PTPRAP18433 802 aa17.49■□□□□ 0.39
ACTB-213ENST00000493945 LIFRP42702 1097 aa17.49■□□□□ 0.39
ACTB-213ENST00000493945 MCM2P49736 904 aa17.49■□□□□ 0.39
ACTB-213ENST00000493945 PPIL2Q13356 520 aa17.49■□□□□ 0.39
ACTB-213ENST00000493945 CST9Q5W186 159 aa17.49■□□□□ 0.39
ACTB-213ENST00000493945 DLK2Q6UY11 383 aa17.49■□□□□ 0.39
ACTB-213ENST00000493945 CATIPQ7Z7H3 387 aa17.49■□□□□ 0.39
ACTB-213ENST00000493945 ZNF280CQ8ND82 737 aa17.49■□□□□ 0.39
ACTB-213ENST00000493945 CCDC102AQ96A19 550 aa17.49■□□□□ 0.39
ACTB-213ENST00000493945 WDR18Q9BV38 432 aa17.49■□□□□ 0.39
ACTB-213ENST00000493945 TMOD4Q9NZQ9 345 aa17.49■□□□□ 0.39
ACTB-213ENST00000493945 C19orf81C9J6K1 198 aa17.48■□□□□ 0.39
ACTB-213ENST00000493945 USP17L10C9JJH3 530 aa17.48■□□□□ 0.39
ACTB-213ENST00000493945 SMIM22K7EJ46 135 aa17.48■□□□□ 0.39
ACTB-213ENST00000493945 ECE1P42892 770 aa17.48■□□□□ 0.39
ACTB-213ENST00000493945 ZNF157P51786 506 aaPredicted RBP17.48■□□□□ 0.39
ACTB-213ENST00000493945 NEK4P51957 841 aa17.48■□□□□ 0.39
ACTB-213ENST00000493945 RGMBQ6NW40 437 aa17.48■□□□□ 0.39
ACTB-213ENST00000493945 PAXIP1Q6ZW49 1069 aaPredicted RBP17.48■□□□□ 0.39
ACTB-213ENST00000493945 SAPCD2Q86UD0 394 aa17.48■□□□□ 0.39
ACTB-213ENST00000493945 UPF3BQ9BZI7 483 aaKnown RBP17.48■□□□□ 0.39
ACTB-213ENST00000493945 INCENPQ9NQS7 918 aa17.48■□□□□ 0.39
ACTB-213ENST00000493945 ZHX2Q9Y6X8 837 aa17.48■□□□□ 0.39
ACTB-213ENST00000493945 IGKV6D-41A0A0C4DH26 115 aa17.47■□□□□ 0.39
ACTB-213ENST00000493945 CXCL11O14625 94 aa17.47■□□□□ 0.39
ACTB-213ENST00000493945 FMR1Q06787 632 aaKnown RBP eCLIP17.47■□□□□ 0.391e-47■□□□□ 8.3
ACTB-213ENST00000493945 CYB5R4Q7L1T6 521 aa17.47■□□□□ 0.39
ACTB-213ENST00000493945 FBXL16Q8N461 479 aa17.47■□□□□ 0.39
ACTB-213ENST00000493945 LPAR1Q92633 364 aa17.47■□□□□ 0.39
ACTB-213ENST00000493945 OPTNQ96CV9 577 aa17.47■□□□□ 0.39
ACTB-213ENST00000493945 OTUD5Q96G74 571 aa17.47■□□□□ 0.39
ACTB-213ENST00000493945 ZKSCAN3Q9BRR0 538 aa17.47■□□□□ 0.39
ACTB-213ENST00000493945 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.47■□□□□ 0.39
ACTB-213ENST00000493945 CLIP2Q9UDT6 1046 aa17.47■□□□□ 0.39
ACTB-213ENST00000493945 FZD1Q9UP38 647 aa17.47■□□□□ 0.39
ACTB-213ENST00000493945 SLC12A7Q9Y666 1083 aa17.47■□□□□ 0.39
ACTB-213ENST00000493945 TAF6LQ9Y6J9 622 aa17.47■□□□□ 0.39
ACTB-213ENST00000493945 SH2B2O14492 632 aaPredicted RBP17.46■□□□□ 0.39
ACTB-213ENST00000493945 RAD21O60216 631 aa17.46■□□□□ 0.39
ACTB-213ENST00000493945 DDAH1O94760 285 aa17.46■□□□□ 0.39
ACTB-213ENST00000493945 EEF2P13639 858 aaKnown RBP17.46■□□□□ 0.39
ACTB-213ENST00000493945 GTF2A2P52657 109 aa17.46■□□□□ 0.39
ACTB-213ENST00000493945 RCAN1P53805 252 aa17.46■□□□□ 0.39
ACTB-213ENST00000493945 EXOSC10Q01780 885 aaKnown RBP17.46■□□□□ 0.39
ACTB-213ENST00000493945 PABPC4Q13310 644 aaKnown RBP eCLIP17.46■□□□□ 0.39
ACTB-213ENST00000493945 SNAPC2Q13487 334 aa17.46■□□□□ 0.39
ACTB-213ENST00000493945 USP17L2Q6R6M4 530 aa17.46■□□□□ 0.39
ACTB-213ENST00000493945 Q6ZUG5 572 aa17.46■□□□□ 0.39
ACTB-213ENST00000493945 MOB2Q70IA6 237 aa17.46■□□□□ 0.39
ACTB-213ENST00000493945 FASTKD5Q7L8L6 764 aaKnown RBP17.46■□□□□ 0.39
ACTB-213ENST00000493945 ENAHQ8N8S7 591 aaPredicted RBP17.46■□□□□ 0.39
ACTB-213ENST00000493945 ANKS1AQ92625 1134 aa17.46■□□□□ 0.39
ACTB-213ENST00000493945 KIAA1683Q9H0B3 1180 aa17.46■□□□□ 0.39
ACTB-213ENST00000493945 ALDH8A1Q9H2A2 487 aaPredicted RBP17.46■□□□□ 0.39
ACTB-213ENST00000493945 PHIPQ8WWQ0 1821 aa17.45■□□□□ 0.38
ACTB-213ENST00000493945 SLURP2P0DP57 97 aa17.45■□□□□ 0.38
ACTB-213ENST00000493945 KIF5BP33176 963 aa17.45■□□□□ 0.38
ACTB-213ENST00000493945 PPP2R5BQ15173 497 aa17.45■□□□□ 0.38
ACTB-213ENST00000493945 CHST3Q7LGC8 479 aa17.45■□□□□ 0.38
ACTB-213ENST00000493945 SGMS1Q86VZ5 419 aa17.45■□□□□ 0.38
ACTB-213ENST00000493945 REM2Q8IYK8 340 aaPredicted RBP17.45■□□□□ 0.38
ACTB-213ENST00000493945 PNMA1Q8ND90 353 aa17.45■□□□□ 0.38
ACTB-213ENST00000493945 GMCL1P1Q8NEA9 526 aa17.45■□□□□ 0.38
ACTB-213ENST00000493945 MKL1Q969V6 931 aa17.45■□□□□ 0.38
ACTB-213ENST00000493945 WNK4Q96J92 1243 aa17.45■□□□□ 0.38
ACTB-213ENST00000493945 NAP1L2Q9ULW6 460 aaPredicted RBP17.45■□□□□ 0.38
ACTB-213ENST00000493945 TMX2Q9Y320 296 aa17.45■□□□□ 0.38
ACTB-213ENST00000493945 TACC3Q9Y6A5 838 aa17.45■□□□□ 0.38
ACTB-213ENST00000493945 CCDC196A0A1B0GTZ2 297 aa17.44■□□□□ 0.38
ACTB-213ENST00000493945 TRIM75PA6NK02 468 aa17.44■□□□□ 0.38
ACTB-213ENST00000493945 CETPP11597 493 aa17.44■□□□□ 0.38
ACTB-213ENST00000493945 GUCY1A2P33402 732 aa17.44■□□□□ 0.38
ACTB-213ENST00000493945 NOVP48745 357 aa17.44■□□□□ 0.38
ACTB-213ENST00000493945 BACE1P56817 501 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms