RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 CDKL2Q92772 493 aa8.65□□□□□ -1.02
BRCA1-221ENST00000493795 CAPS2Q9BXY5 557 aa8.65□□□□□ -1.02
BRCA1-221ENST00000493795 NYXQ9GZU5 481 aa8.65□□□□□ -1.02
BRCA1-221ENST00000493795 KIF21BO75037 1637 aa8.65□□□□□ -1.02
BRCA1-221ENST00000493795 VGLL3A8MV65 326 aa8.65□□□□□ -1.02
BRCA1-221ENST00000493795 ARHGEF9O43307 516 aa8.65□□□□□ -1.02
BRCA1-221ENST00000493795 EXOC3O60645 756 aa8.65□□□□□ -1.02
BRCA1-221ENST00000493795 ECE1P42892 770 aa8.65□□□□□ -1.02
BRCA1-221ENST00000493795 GUCY2FP51841 1108 aa8.65□□□□□ -1.02
BRCA1-221ENST00000493795 AK2P54819 239 aa8.65□□□□□ -1.02
BRCA1-221ENST00000493795 NOP14P78316 857 aaKnown RBP8.65□□□□□ -1.02
BRCA1-221ENST00000493795 PPP2R5AQ15172 486 aa8.65□□□□□ -1.02
BRCA1-221ENST00000493795 HP1BP3Q5SSJ5 553 aaPredicted RBP8.65□□□□□ -1.02
BRCA1-221ENST00000493795 SPOUT1Q5T280 376 aaKnown RBP8.65□□□□□ -1.02
BRCA1-221ENST00000493795 SKAP1Q86WV1 359 aa8.65□□□□□ -1.02
BRCA1-221ENST00000493795 MAGEB6Q8N7X4 407 aa8.65□□□□□ -1.02
BRCA1-221ENST00000493795 AZI2Q9H6S1 392 aa8.65□□□□□ -1.02
BRCA1-221ENST00000493795 ANLNQ9NQW6 1124 aa8.65□□□□□ -1.02
BRCA1-221ENST00000493795 MAN1A2O60476 641 aa8.65□□□□□ -1.02
BRCA1-221ENST00000493795 ADAMTS2O95450 1211 aa8.65□□□□□ -1.02
BRCA1-221ENST00000493795 CLTAP09496 248 aa8.65□□□□□ -1.02
BRCA1-221ENST00000493795 LONRF3Q496Y0 759 aa8.65□□□□□ -1.02
BRCA1-221ENST00000493795 NCAPH2Q6IBW4 605 aa8.65□□□□□ -1.02
BRCA1-221ENST00000493795 TTC6Q86TZ1 520 aa8.65□□□□□ -1.02
BRCA1-221ENST00000493795 PPWD1Q96BP3 646 aaKnown RBP8.65□□□□□ -1.02
BRCA1-221ENST00000493795 MED10Q9BTT4 135 aa8.65□□□□□ -1.02
BRCA1-221ENST00000493795 TTC41PQ6P2S7 1318 aa8.65□□□□□ -1.02
BRCA1-221ENST00000493795 THAP12O43422 761 aa8.65□□□□□ -1.03
BRCA1-221ENST00000493795 LONP1P36776 959 aaKnown RBP8.65□□□□□ -1.03
BRCA1-221ENST00000493795 HDAC1Q13547 482 aaPredicted RBP8.65□□□□□ -1.03
BRCA1-221ENST00000493795 PRPSAP1Q14558 356 aa8.65□□□□□ -1.03
BRCA1-221ENST00000493795 RAB3GAP1Q15042 981 aa8.65□□□□□ -1.03
BRCA1-221ENST00000493795 C4orf50Q6ZRC1 276 aa8.65□□□□□ -1.03
BRCA1-221ENST00000493795 FAM186BQ8IYM0 893 aa8.65□□□□□ -1.03
BRCA1-221ENST00000493795 KCNH3Q9ULD8 1083 aa8.65□□□□□ -1.03
BRCA1-221ENST00000493795 FRMD3A2A2Y4 597 aa8.65□□□□□ -1.03
BRCA1-221ENST00000493795 NVLO15381 856 aaKnown RBP8.65□□□□□ -1.03
BRCA1-221ENST00000493795 ECM2O94769 699 aaPredicted RBP8.65□□□□□ -1.03
BRCA1-221ENST00000493795 DEXIO95424 95 aa8.65□□□□□ -1.03
BRCA1-221ENST00000493795 TSTA3Q13630 321 aaPredicted RBP8.65□□□□□ -1.03
BRCA1-221ENST00000493795 CREB3L3Q68CJ9 461 aa8.65□□□□□ -1.03
BRCA1-221ENST00000493795 ARMC9Q7Z3E5 817 aa8.65□□□□□ -1.03
BRCA1-221ENST00000493795 WAPLQ7Z5K2 1190 aa8.65□□□□□ -1.03
BRCA1-221ENST00000493795 PSMB7Q99436 277 aa8.65□□□□□ -1.03
BRCA1-221ENST00000493795 KIFC3Q9BVG8 833 aa8.65□□□□□ -1.03
BRCA1-221ENST00000493795 IFT122Q9HBG6 1241 aa8.65□□□□□ -1.03
BRCA1-221ENST00000493795 KCNG1Q9UIX4 513 aa8.65□□□□□ -1.03
BRCA1-221ENST00000493795 POGZQ7Z3K3 1410 aa8.64□□□□□ -1.03
BRCA1-221ENST00000493795 NCOA2Q15596 1464 aa8.64□□□□□ -1.03
BRCA1-221ENST00000493795 ZBBXA8MT70 800 aa8.64□□□□□ -1.03
BRCA1-221ENST00000493795 GNA14O95837 355 aa8.64□□□□□ -1.03
BRCA1-221ENST00000493795 MYCT1Q8N699 235 aa8.64□□□□□ -1.03
BRCA1-221ENST00000493795 MYRIPQ8NFW9 859 aa8.64□□□□□ -1.03
BRCA1-221ENST00000493795 INTS4Q96HW7 963 aaKnown RBP8.64□□□□□ -1.03
BRCA1-221ENST00000493795 EYA3Q99504 573 aa8.64□□□□□ -1.03
BRCA1-221ENST00000493795 GIMAP4Q9NUV9 329 aa8.64□□□□□ -1.03
BRCA1-221ENST00000493795 SUCLA2Q9P2R7 463 aaPredicted RBP8.64□□□□□ -1.03
BRCA1-221ENST00000493795 ANAPC5Q9UJX4 755 aa8.64□□□□□ -1.03
BRCA1-221ENST00000493795 PACSIN2Q9UNF0 486 aaPredicted RBP8.64□□□□□ -1.03
BRCA1-221ENST00000493795 LDHBP07195 334 aaKnown RBP8.64□□□□□ -1.03
BRCA1-221ENST00000493795 NUDCD3Q8IVD9 361 aa8.64□□□□□ -1.03
BRCA1-221ENST00000493795 JARID2Q92833 1246 aaPredicted RBP8.64□□□□□ -1.03
BRCA1-221ENST00000493795 FGD4Q96M96 766 aa8.64□□□□□ -1.03
BRCA1-221ENST00000493795 IFIH1Q9BYX4 1025 aaKnown RBP8.64□□□□□ -1.03
BRCA1-221ENST00000493795 SCOCQ9UIL1 159 aa8.64□□□□□ -1.03
BRCA1-221ENST00000493795 CCDC141Q6ZP82 1450 aa8.64□□□□□ -1.03
BRCA1-221ENST00000493795 ZNF75DP51815 510 aa8.64□□□□□ -1.03
BRCA1-221ENST00000493795 NLRP12P59046 1061 aa8.64□□□□□ -1.03
BRCA1-221ENST00000493795 IQCB1Q15051 598 aa8.64□□□□□ -1.03
BRCA1-221ENST00000493795 RBM26Q5T8P6 1007 aaKnown RBP8.64□□□□□ -1.03
BRCA1-221ENST00000493795 TMTC3Q6ZXV5 915 aa8.64□□□□□ -1.03
BRCA1-221ENST00000493795 TRIM42Q8IWZ5 723 aa8.64□□□□□ -1.03
BRCA1-221ENST00000493795 ANKRD2Q9GZV1 360 aa8.64□□□□□ -1.03
BRCA1-221ENST00000493795 ARHGEF10LQ9HCE6 1279 aa8.64□□□□□ -1.03
BRCA1-221ENST00000493795 PICK1Q9NRD5 415 aa8.64□□□□□ -1.03
BRCA1-221ENST00000493795 PNMA2Q9UL42 364 aa8.64□□□□□ -1.03
BRCA1-221ENST00000493795 BZW2Q9Y6E2 419 aaKnown RBP8.64□□□□□ -1.03
BRCA1-221ENST00000493795 ALDH1L1O75891 902 aa8.64□□□□□ -1.03
BRCA1-221ENST00000493795 SUN1O94901 812 aa8.64□□□□□ -1.03
BRCA1-221ENST00000493795 NPR1P16066 1061 aa8.64□□□□□ -1.03
BRCA1-221ENST00000493795 EEF1B2P24534 225 aaKnown RBP8.64□□□□□ -1.03
BRCA1-221ENST00000493795 PIK3AP1Q6ZUJ8 805 aa8.64□□□□□ -1.03
BRCA1-221ENST00000493795 CHST3Q7LGC8 479 aa8.64□□□□□ -1.03
BRCA1-221ENST00000493795 JDP2Q8WYK2 163 aa8.64□□□□□ -1.03
BRCA1-221ENST00000493795 NGLY1Q96IV0 654 aa8.64□□□□□ -1.03
BRCA1-221ENST00000493795 HELLSQ9NRZ9 838 aa8.64□□□□□ -1.03
BRCA1-221ENST00000493795 TAB2Q9NYJ8 693 aa8.64□□□□□ -1.03
BRCA1-221ENST00000493795 DNM3Q9UQ16 869 aa8.64□□□□□ -1.03
BRCA1-221ENST00000493795 MAD1L1Q9Y6D9 718 aa8.64□□□□□ -1.03
BRCA1-221ENST00000493795 KRIT1O00522 736 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 CUTAO60888 179 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 SERPINI2O75830 405 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 IFNB1P01574 187 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 ATF2P15336 505 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 SAT1P21673 171 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 ARHGDIAP52565 204 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 YARSP54577 528 aaKnown RBP8.63□□□□□ -1.03
BRCA1-221ENST00000493795 SNX1Q13596 522 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 CWF19L2Q2TBE0 894 aaKnown RBP8.63□□□□□ -1.03
BRCA1-221ENST00000493795 CCDC84Q86UT8 332 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms