RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 ADAMTS10Q9H324 1103 aa8.03□□□□□ -1.12
SMC4-223ENST00000493695 TRIT1Q9H3H1 467 aaKnown RBP8.03□□□□□ -1.12
SMC4-223ENST00000493695 SLC6A19Q695T7 634 aa8.02□□□□□ -1.13
SMC4-223ENST00000493695 CIAPIN1Q6FI81 312 aa8.02□□□□□ -1.13
SMC4-223ENST00000493695 LCNL1Q6ZST4 164 aa8.02□□□□□ -1.13
SMC4-223ENST00000493695 PIWIL2Q8TC59 973 aaKnown RBP8.02□□□□□ -1.13
SMC4-223ENST00000493695 GFRA2O00451 464 aa8.01□□□□□ -1.13
SMC4-223ENST00000493695 ESR1P03372 595 aa8.01□□□□□ -1.13
SMC4-223ENST00000493695 TRHRP34981 398 aaPredicted RBP8.01□□□□□ -1.13
SMC4-223ENST00000493695 LIG3P49916 1009 aa8.01□□□□□ -1.13
SMC4-223ENST00000493695 MRPL41Q8IXM3 137 aaKnown RBP8.01□□□□□ -1.13
SMC4-223ENST00000493695 KRTAP4-9Q9BYQ8 210 aa8.01□□□□□ -1.13
SMC4-223ENST00000493695 GPATCH2Q9NW75 528 aa8.01□□□□□ -1.13
SMC4-223ENST00000493695 DUSP13Q9UII6 198 aa8.01□□□□□ -1.13
SMC4-223ENST00000493695 LTKP29376 864 aa8□□□□□ -1.13
SMC4-223ENST00000493695 TNNI2P48788 182 aa8□□□□□ -1.13
SMC4-223ENST00000493695 EGR3Q06889 387 aa8□□□□□ -1.13
SMC4-223ENST00000493695 KCNA10Q16322 511 aa8□□□□□ -1.13
SMC4-223ENST00000493695 TSNAXIP1Q2TAA8 658 aa8□□□□□ -1.13
SMC4-223ENST00000493695 LILRA6Q6PI73 481 aa8□□□□□ -1.13
SMC4-223ENST00000493695 AGMOQ6ZNB7 445 aa8□□□□□ -1.13
SMC4-223ENST00000493695 C1QL4Q86Z23 238 aa8□□□□□ -1.13
SMC4-223ENST00000493695 CILP2Q8IUL8 1156 aa8□□□□□ -1.13
SMC4-223ENST00000493695 C19orf44Q9H6X5 657 aa8□□□□□ -1.13
SMC4-223ENST00000493695 ETV2O00321 342 aaPredicted RBP7.99□□□□□ -1.13
SMC4-223ENST00000493695 PRPF40AO75400 957 aaKnown RBP7.99□□□□□ -1.13
SMC4-223ENST00000493695 KCNA1Q09470 495 aa7.99□□□□□ -1.13
SMC4-223ENST00000493695 DUSP9Q99956 384 aaKnown RBP7.99□□□□□ -1.13
SMC4-223ENST00000493695 KCNH3Q9ULD8 1083 aa7.99□□□□□ -1.13
SMC4-223ENST00000493695 TACC3Q9Y6A5 838 aa7.99□□□□□ -1.13
SMC4-223ENST00000493695 AK5Q9Y6K8 562 aa7.99□□□□□ -1.13
SMC4-223ENST00000493695 NUAK1O60285 661 aa7.98□□□□□ -1.13
SMC4-223ENST00000493695 BPNT1O95861 308 aa7.98□□□□□ -1.13
SMC4-223ENST00000493695 PLCG1P19174 1290 aa7.98□□□□□ -1.13
SMC4-223ENST00000493695 CHMP4BP1P59074 171 aa7.98□□□□□ -1.13
SMC4-223ENST00000493695 RPL6Q02878 288 aaKnown RBP7.98□□□□□ -1.13
SMC4-223ENST00000493695 SIAH1Q8IUQ4 282 aa7.98□□□□□ -1.13
SMC4-223ENST00000493695 MCATQ8IVS2 390 aaKnown RBP7.98□□□□□ -1.13
SMC4-223ENST00000493695 FAM13CQ8NE31 585 aa7.98□□□□□ -1.13
SMC4-223ENST00000493695 Q96M66 194 aa7.98□□□□□ -1.13
SMC4-223ENST00000493695 SLC26A8Q96RN1 970 aa7.98□□□□□ -1.13
SMC4-223ENST00000493695 CEP131Q9UPN4 1083 aa7.98□□□□□ -1.13
SMC4-223ENST00000493695 TLR6Q9Y2C9 796 aa7.98□□□□□ -1.13
SMC4-223ENST00000493695 KRT1P04264 644 aa7.97□□□□□ -1.13
SMC4-223ENST00000493695 TFE3P19532 575 aaPredicted RBP7.97□□□□□ -1.13
SMC4-223ENST00000493695 MEI1Q5TIA1 1274 aa7.97□□□□□ -1.13
SMC4-223ENST00000493695 TMEM132EQ6IEE7 984 aa7.97□□□□□ -1.13
SMC4-223ENST00000493695 OXR1Q8N573 874 aa7.97□□□□□ -1.13
SMC4-223ENST00000493695 ACSF2Q96CM8 615 aaPredicted RBP7.97□□□□□ -1.13
SMC4-223ENST00000493695 RNF32Q9H0A6 362 aa7.97□□□□□ -1.13
SMC4-223ENST00000493695 DUSP15Q9H1R2 295 aaPredicted RBP7.97□□□□□ -1.13
SMC4-223ENST00000493695 RNF19AQ9NV58 838 aa7.97□□□□□ -1.13
SMC4-223ENST00000493695 SMG5Q9UPR3 1016 aaKnown RBP7.97□□□□□ -1.13
SMC4-223ENST00000493695 CORINQ9Y5Q5 1042 aa7.97□□□□□ -1.13
SMC4-223ENST00000493695 UPK3BL1B0FP48 263 aa7.96□□□□□ -1.14
SMC4-223ENST00000493695 UPK3BL2E5RIL1 263 aa7.96□□□□□ -1.14
SMC4-223ENST00000493695 F6X3S4 739 aa7.96□□□□□ -1.14
SMC4-223ENST00000493695 HPXP02790 462 aa7.96□□□□□ -1.14
SMC4-223ENST00000493695 RLBP1P12271 317 aa7.95□□□□□ -1.14
SMC4-223ENST00000493695 YARSP54577 528 aaKnown RBP7.95□□□□□ -1.14
SMC4-223ENST00000493695 EAPPQ56P03 285 aaPredicted RBP7.95□□□□□ -1.14
SMC4-223ENST00000493695 ZNF605Q86T29 641 aa7.95□□□□□ -1.14
SMC4-223ENST00000493695 DNAJB8Q8NHS0 232 aa7.95□□□□□ -1.14
SMC4-223ENST00000493695 IRF2BPLQ9H1B7 796 aa7.95□□□□□ -1.14
SMC4-223ENST00000493695 ADAM30Q9UKF2 790 aa7.95□□□□□ -1.14
SMC4-223ENST00000493695 PDE6BP35913 854 aa7.94□□□□□ -1.14
SMC4-223ENST00000493695 DTWD2Q8NBA8 298 aa7.94□□□□□ -1.14
SMC4-223ENST00000493695 PDZD8Q8NEN9 1154 aa7.94□□□□□ -1.14
SMC4-223ENST00000493695 CYB5D2Q8WUJ1 264 aa7.94□□□□□ -1.14
SMC4-223ENST00000493695 DHX38Q92620 1227 aaKnown RBP7.94□□□□□ -1.14
SMC4-223ENST00000493695 CD320Q9NPF0 282 aa7.94□□□□□ -1.14
SMC4-223ENST00000493695 KLHL3Q9UH77 587 aa7.94□□□□□ -1.14
SMC4-223ENST00000493695 PCDHA11Q9Y5I1 949 aa7.94□□□□□ -1.14
SMC4-223ENST00000493695 LRRN2O75325 713 aa7.93□□□□□ -1.14
SMC4-223ENST00000493695 INHBBP09529 407 aa7.93□□□□□ -1.14
SMC4-223ENST00000493695 LINC00310P59036 64 aa7.93□□□□□ -1.14
SMC4-223ENST00000493695 PSMD2Q13200 908 aa7.93□□□□□ -1.14
SMC4-223ENST00000493695 CLEC16AQ2KHT3 1053 aa7.93□□□□□ -1.14
SMC4-223ENST00000493695 TSPYL5Q86VY4 417 aaPredicted RBP7.93□□□□□ -1.14
SMC4-223ENST00000493695 SLC6A17Q9H1V8 727 aa7.93□□□□□ -1.14
SMC4-223ENST00000493695 GPR160Q9UJ42 338 aa7.93□□□□□ -1.14
SMC4-223ENST00000493695 FITM1A5D6W6 292 aa7.92□□□□□ -1.14
SMC4-223ENST00000493695 GLDCP23378 1020 aa7.92□□□□□ -1.14
SMC4-223ENST00000493695 TAF1CQ15572 869 aaPredicted RBP7.92□□□□□ -1.14
SMC4-223ENST00000493695 GAB4Q2WGN9 574 aa7.92□□□□□ -1.14
SMC4-223ENST00000493695 GPR62Q9BZJ7 368 aa7.92□□□□□ -1.14
SMC4-223ENST00000493695 ANKRD33BA6NCL7 494 aa7.91□□□□□ -1.14
SMC4-223ENST00000493695 B8ZZF3 427 aa7.91□□□□□ -1.14
SMC4-223ENST00000493695 ZGLP1P0C6A0 271 aa7.91□□□□□ -1.14
SMC4-223ENST00000493695 MED14OSP0DP75 135 aa7.91□□□□□ -1.14
SMC4-223ENST00000493695 XPCQ01831 940 aaPredicted RBP7.91□□□□□ -1.14
SMC4-223ENST00000493695 BNC2Q6ZN30 1099 aaPredicted RBP7.91□□□□□ -1.14
SMC4-223ENST00000493695 PHACTR4Q8IZ21 702 aa7.91□□□□□ -1.14
SMC4-223ENST00000493695 LILRA2Q8N149 483 aa7.91□□□□□ -1.14
SMC4-223ENST00000493695 ASCC2Q9H1I8 757 aaPredicted RBP7.91□□□□□ -1.14
SMC4-223ENST00000493695 PARP2Q9UGN5 583 aa7.91□□□□□ -1.14
SMC4-223ENST00000493695 TIGD5Q53EQ6 642 aa7.9□□□□□ -1.14
SMC4-223ENST00000493695 SPPL2CQ8IUH8 684 aa7.9□□□□□ -1.14
SMC4-223ENST00000493695 PPP1R13LQ8WUF5 828 aa7.9□□□□□ -1.14
SMC4-223ENST00000493695 GRIN3BO60391 1043 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms